Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4103 and PfGW456L13_4104 are separated by 10 nucleotides PfGW456L13_4104 and PfGW456L13_4105 are separated by 73 nucleotides
PfGW456L13_4103 - Nitrate reductase (EC 1.7.99.4) (from data) , at 4,614,363 to 4,617,080
_4103
PfGW456L13_4104 - Uroporphyrinogen-III methyltransferase (EC 2.1.1.107), at 4,617,091 to 4,617,855
_4104
PfGW456L13_4105 - Major porin and structural outer membrane porin OprF, at 4,617,929 to 4,618,960
_4105
Position (kb)
4617
4618 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4616.441 kb on + strand, within PfGW456L13_4103 at 4616.488 kb on + strand, within PfGW456L13_4103 at 4616.488 kb on + strand, within PfGW456L13_4103 at 4616.488 kb on + strand, within PfGW456L13_4103 at 4616.488 kb on + strand, within PfGW456L13_4103 at 4616.489 kb on - strand, within PfGW456L13_4103 at 4616.533 kb on + strand, within PfGW456L13_4103 at 4616.559 kb on + strand, within PfGW456L13_4103 at 4616.559 kb on + strand, within PfGW456L13_4103 at 4616.560 kb on - strand, within PfGW456L13_4103 at 4616.560 kb on - strand, within PfGW456L13_4103 at 4616.618 kb on + strand, within PfGW456L13_4103 at 4616.619 kb on - strand, within PfGW456L13_4103 at 4616.619 kb on - strand, within PfGW456L13_4103 at 4616.694 kb on + strand, within PfGW456L13_4103 at 4616.694 kb on + strand, within PfGW456L13_4103 at 4616.717 kb on - strand, within PfGW456L13_4103 at 4617.090 kb on + strand at 4617.090 kb on + strand at 4617.091 kb on - strand at 4617.091 kb on - strand at 4617.091 kb on - strand at 4617.091 kb on - strand at 4617.091 kb on - strand at 4617.091 kb on - strand at 4617.113 kb on + strand at 4617.114 kb on - strand at 4617.158 kb on + strand at 4617.328 kb on - strand, within PfGW456L13_4104 at 4617.495 kb on - strand, within PfGW456L13_4104 at 4617.495 kb on - strand, within PfGW456L13_4104 at 4617.589 kb on + strand, within PfGW456L13_4104 at 4617.589 kb on + strand, within PfGW456L13_4104 at 4617.589 kb on + strand, within PfGW456L13_4104 at 4617.589 kb on + strand, within PfGW456L13_4104 at 4617.589 kb on + strand, within PfGW456L13_4104 at 4617.589 kb on + strand, within PfGW456L13_4104 at 4617.589 kb on + strand, within PfGW456L13_4104 at 4617.590 kb on - strand, within PfGW456L13_4104 at 4617.590 kb on - strand, within PfGW456L13_4104 at 4617.629 kb on + strand, within PfGW456L13_4104 at 4617.630 kb on - strand, within PfGW456L13_4104 at 4617.853 kb on + strand at 4617.853 kb on + strand at 4617.853 kb on + strand at 4617.853 kb on + strand at 4617.854 kb on - strand at 4617.854 kb on - strand at 4617.854 kb on - strand at 4617.854 kb on - strand at 4617.854 kb on - strand at 4617.872 kb on - strand at 4617.931 kb on - strand at 4617.931 kb on - strand at 4617.935 kb on - strand at 4618.120 kb on - strand, within PfGW456L13_4105 at 4618.215 kb on + strand, within PfGW456L13_4105 at 4618.317 kb on - strand, within PfGW456L13_4105
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 4,616,441 + PfGW456L13_4103 0.76 +0.1 4,616,488 + PfGW456L13_4103 0.78 +0.1 4,616,488 + PfGW456L13_4103 0.78 -0.7 4,616,488 + PfGW456L13_4103 0.78 +1.5 4,616,488 + PfGW456L13_4103 0.78 +1.0 4,616,489 - PfGW456L13_4103 0.78 -3.4 4,616,533 + PfGW456L13_4103 0.80 +0.7 4,616,559 + PfGW456L13_4103 0.81 -0.5 4,616,559 + PfGW456L13_4103 0.81 -1.1 4,616,560 - PfGW456L13_4103 0.81 -1.1 4,616,560 - PfGW456L13_4103 0.81 -0.6 4,616,618 + PfGW456L13_4103 0.83 -0.4 4,616,619 - PfGW456L13_4103 0.83 +0.5 4,616,619 - PfGW456L13_4103 0.83 +0.5 4,616,694 + PfGW456L13_4103 0.86 -0.5 4,616,694 + PfGW456L13_4103 0.86 +0.1 4,616,717 - PfGW456L13_4103 0.87 -0.5 4,617,090 + -1.3 4,617,090 + +0.7 4,617,091 - +0.6 4,617,091 - +0.2 4,617,091 - -0.5 4,617,091 - -0.4 4,617,091 - +0.7 4,617,091 - +0.6 4,617,113 + -0.2 4,617,114 - -0.0 4,617,158 + -0.3 4,617,328 - PfGW456L13_4104 0.31 +0.5 4,617,495 - PfGW456L13_4104 0.53 +1.2 4,617,495 - PfGW456L13_4104 0.53 +0.1 4,617,589 + PfGW456L13_4104 0.65 -0.3 4,617,589 + PfGW456L13_4104 0.65 +0.1 4,617,589 + PfGW456L13_4104 0.65 -0.7 4,617,589 + PfGW456L13_4104 0.65 -1.2 4,617,589 + PfGW456L13_4104 0.65 +1.1 4,617,589 + PfGW456L13_4104 0.65 +0.3 4,617,589 + PfGW456L13_4104 0.65 -1.1 4,617,590 - PfGW456L13_4104 0.65 +0.1 4,617,590 - PfGW456L13_4104 0.65 +1.3 4,617,629 + PfGW456L13_4104 0.70 +0.3 4,617,630 - PfGW456L13_4104 0.70 +1.2 4,617,853 + +0.7 4,617,853 + -0.2 4,617,853 + -0.6 4,617,853 + -0.6 4,617,854 - -1.3 4,617,854 - -1.0 4,617,854 - +0.4 4,617,854 - +0.5 4,617,854 - +0.4 4,617,872 - +1.0 4,617,931 - +0.7 4,617,931 - -3.3 4,617,935 - -2.3 4,618,120 - PfGW456L13_4105 0.19 -0.9 4,618,215 + PfGW456L13_4105 0.28 -2.7 4,618,317 - PfGW456L13_4105 0.38 +0.1
Or see this region's nucleotide sequence