Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3844 and PfGW456L13_3845 overlap by 14 nucleotides PfGW456L13_3845 and PfGW456L13_3846 are separated by 13 nucleotides PfGW456L13_3846 and PfGW456L13_3847 overlap by 20 nucleotides
PfGW456L13_3844 - Predicted secretion system X transmembrane protein 2, at 4,308,270 to 4,308,818
_3844
PfGW456L13_3845 - Predicted secretion system X transmembrane protein 1, at 4,308,805 to 4,309,338
_3845
PfGW456L13_3846 - Predicted secretion system X FIG084745: hypothetical protein, at 4,309,352 to 4,310,155
_3846
PfGW456L13_3847 - Predicted secretion system X protein GspE-like, at 4,310,136 to 4,311,842
_3847
Position (kb)
4309
4310
4311 Strain fitness (log2 ratio)
-1
0
1 at 4308.426 kb on + strand, within PfGW456L13_3844 at 4308.446 kb on - strand, within PfGW456L13_3844 at 4308.484 kb on + strand, within PfGW456L13_3844 at 4308.484 kb on + strand, within PfGW456L13_3844 at 4308.485 kb on - strand, within PfGW456L13_3844 at 4308.485 kb on - strand, within PfGW456L13_3844 at 4308.485 kb on - strand, within PfGW456L13_3844 at 4308.529 kb on + strand, within PfGW456L13_3844 at 4308.529 kb on + strand, within PfGW456L13_3844 at 4308.530 kb on - strand, within PfGW456L13_3844 at 4308.649 kb on + strand, within PfGW456L13_3844 at 4308.650 kb on - strand, within PfGW456L13_3844 at 4308.724 kb on + strand, within PfGW456L13_3844 at 4308.724 kb on + strand, within PfGW456L13_3844 at 4308.724 kb on + strand, within PfGW456L13_3844 at 4308.725 kb on - strand, within PfGW456L13_3844 at 4308.725 kb on - strand, within PfGW456L13_3844 at 4308.725 kb on - strand, within PfGW456L13_3844 at 4308.787 kb on + strand at 4308.788 kb on - strand at 4308.901 kb on + strand, within PfGW456L13_3845 at 4309.377 kb on + strand at 4309.377 kb on + strand at 4309.377 kb on + strand at 4309.378 kb on - strand at 4309.699 kb on - strand, within PfGW456L13_3846 at 4309.817 kb on + strand, within PfGW456L13_3846 at 4309.849 kb on - strand, within PfGW456L13_3846 at 4310.145 kb on - strand at 4310.767 kb on + strand, within PfGW456L13_3847 at 4310.768 kb on - strand, within PfGW456L13_3847 at 4310.887 kb on + strand, within PfGW456L13_3847 at 4310.887 kb on + strand, within PfGW456L13_3847
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 4,308,426 + PfGW456L13_3844 0.28 +0.8 4,308,446 - PfGW456L13_3844 0.32 -0.9 4,308,484 + PfGW456L13_3844 0.39 +0.5 4,308,484 + PfGW456L13_3844 0.39 -0.1 4,308,485 - PfGW456L13_3844 0.39 -0.5 4,308,485 - PfGW456L13_3844 0.39 +0.2 4,308,485 - PfGW456L13_3844 0.39 +0.1 4,308,529 + PfGW456L13_3844 0.47 -1.5 4,308,529 + PfGW456L13_3844 0.47 +0.6 4,308,530 - PfGW456L13_3844 0.47 -1.5 4,308,649 + PfGW456L13_3844 0.69 -0.5 4,308,650 - PfGW456L13_3844 0.69 +0.2 4,308,724 + PfGW456L13_3844 0.83 +0.7 4,308,724 + PfGW456L13_3844 0.83 +0.4 4,308,724 + PfGW456L13_3844 0.83 -0.0 4,308,725 - PfGW456L13_3844 0.83 +1.1 4,308,725 - PfGW456L13_3844 0.83 +0.6 4,308,725 - PfGW456L13_3844 0.83 +0.8 4,308,787 + +0.0 4,308,788 - -1.1 4,308,901 + PfGW456L13_3845 0.18 -0.8 4,309,377 + -0.4 4,309,377 + +0.7 4,309,377 + +1.6 4,309,378 - +0.3 4,309,699 - PfGW456L13_3846 0.43 +0.4 4,309,817 + PfGW456L13_3846 0.58 +0.5 4,309,849 - PfGW456L13_3846 0.62 +1.2 4,310,145 - -0.4 4,310,767 + PfGW456L13_3847 0.37 -0.5 4,310,768 - PfGW456L13_3847 0.37 +0.0 4,310,887 + PfGW456L13_3847 0.44 +0.4 4,310,887 + PfGW456L13_3847 0.44 -0.4
Or see this region's nucleotide sequence