Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3749 and PfGW456L13_3750 are separated by 146 nucleotides PfGW456L13_3750 and PfGW456L13_3751 are separated by 152 nucleotides
PfGW456L13_3749 - Nitrogen regulation protein NR(I), at 4,223,126 to 4,223,755
_3749
PfGW456L13_3750 - Transcriptional activator feaR, at 4,223,902 to 4,224,819
_3750
PfGW456L13_3751 - Flavodoxin reductases (ferredoxin-NADPH reductases) family 1; Vanillate O-demethylase oxidoreductase (EC 1.14.13.-), at 4,224,972 to 4,225,922
_3751
Position (kb)
4223
4224
4225 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4222.910 kb on + strand at 4222.911 kb on - strand at 4222.911 kb on - strand at 4222.996 kb on + strand at 4222.996 kb on + strand at 4222.997 kb on - strand at 4222.997 kb on - strand at 4223.043 kb on + strand at 4223.044 kb on - strand at 4223.044 kb on - strand at 4223.044 kb on - strand at 4223.044 kb on - strand at 4223.098 kb on + strand at 4223.099 kb on - strand at 4223.099 kb on - strand at 4223.102 kb on + strand at 4223.150 kb on + strand at 4223.150 kb on + strand at 4223.150 kb on + strand at 4223.150 kb on + strand at 4223.151 kb on - strand at 4223.151 kb on - strand at 4223.151 kb on - strand at 4223.151 kb on - strand at 4223.153 kb on - strand at 4223.448 kb on - strand, within PfGW456L13_3749 at 4223.448 kb on - strand, within PfGW456L13_3749 at 4223.448 kb on - strand, within PfGW456L13_3749 at 4223.500 kb on - strand, within PfGW456L13_3749 at 4223.727 kb on + strand at 4223.727 kb on + strand at 4223.822 kb on + strand at 4223.823 kb on - strand at 4223.823 kb on - strand at 4223.910 kb on + strand at 4223.910 kb on + strand at 4223.910 kb on + strand at 4223.910 kb on + strand at 4223.911 kb on - strand at 4223.911 kb on - strand at 4223.911 kb on - strand at 4223.911 kb on - strand at 4223.912 kb on + strand at 4223.972 kb on + strand at 4223.972 kb on + strand at 4223.999 kb on + strand, within PfGW456L13_3750 at 4224.000 kb on - strand, within PfGW456L13_3750 at 4224.000 kb on - strand, within PfGW456L13_3750 at 4224.000 kb on - strand, within PfGW456L13_3750 at 4224.080 kb on + strand, within PfGW456L13_3750 at 4224.080 kb on + strand, within PfGW456L13_3750 at 4224.080 kb on + strand, within PfGW456L13_3750 at 4224.080 kb on + strand, within PfGW456L13_3750 at 4224.081 kb on - strand, within PfGW456L13_3750 at 4224.081 kb on - strand, within PfGW456L13_3750 at 4224.081 kb on - strand, within PfGW456L13_3750 at 4224.081 kb on - strand, within PfGW456L13_3750 at 4224.415 kb on + strand, within PfGW456L13_3750 at 4224.415 kb on + strand, within PfGW456L13_3750 at 4224.483 kb on - strand, within PfGW456L13_3750 at 4224.483 kb on - strand, within PfGW456L13_3750 at 4224.483 kb on - strand, within PfGW456L13_3750 at 4224.483 kb on - strand, within PfGW456L13_3750 at 4224.483 kb on - strand, within PfGW456L13_3750 at 4224.597 kb on - strand, within PfGW456L13_3750 at 4224.599 kb on + strand, within PfGW456L13_3750 at 4224.599 kb on + strand, within PfGW456L13_3750 at 4224.641 kb on + strand, within PfGW456L13_3750 at 4224.642 kb on - strand, within PfGW456L13_3750 at 4224.713 kb on + strand, within PfGW456L13_3750 at 4224.714 kb on - strand, within PfGW456L13_3750 at 4224.814 kb on - strand at 4224.848 kb on - strand at 4224.848 kb on - strand at 4224.895 kb on + strand at 4224.967 kb on - strand at 4224.973 kb on + strand at 4225.012 kb on - strand at 4225.012 kb on - strand at 4225.198 kb on - strand, within PfGW456L13_3751 at 4225.358 kb on + strand, within PfGW456L13_3751 at 4225.359 kb on - strand, within PfGW456L13_3751 at 4225.359 kb on - strand, within PfGW456L13_3751 at 4225.360 kb on + strand, within PfGW456L13_3751 at 4225.361 kb on - strand at 4225.361 kb on - strand, within PfGW456L13_3751 at 4225.361 kb on - strand, within PfGW456L13_3751 at 4225.361 kb on - strand, within PfGW456L13_3751 at 4225.361 kb on - strand, within PfGW456L13_3751 at 4225.481 kb on + strand, within PfGW456L13_3751 at 4225.513 kb on + strand, within PfGW456L13_3751
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 4,222,910 + +1.0 4,222,911 - -1.2 4,222,911 - -1.0 4,222,996 + -0.1 4,222,996 + -0.3 4,222,997 - -0.0 4,222,997 - +0.2 4,223,043 + +0.1 4,223,044 - -1.1 4,223,044 - +0.1 4,223,044 - +0.0 4,223,044 - +0.0 4,223,098 + -0.5 4,223,099 - -0.1 4,223,099 - -1.9 4,223,102 + +0.3 4,223,150 + -0.7 4,223,150 + +0.6 4,223,150 + -0.6 4,223,150 + +0.5 4,223,151 - +0.6 4,223,151 - -0.3 4,223,151 - -0.9 4,223,151 - -1.9 4,223,153 - -1.4 4,223,448 - PfGW456L13_3749 0.51 +0.2 4,223,448 - PfGW456L13_3749 0.51 +1.3 4,223,448 - PfGW456L13_3749 0.51 -0.8 4,223,500 - PfGW456L13_3749 0.59 +0.7 4,223,727 + -0.3 4,223,727 + -0.0 4,223,822 + -0.6 4,223,823 - -0.1 4,223,823 - +0.3 4,223,910 + +0.1 4,223,910 + +0.6 4,223,910 + +0.3 4,223,910 + -2.1 4,223,911 - -0.5 4,223,911 - -0.0 4,223,911 - -1.4 4,223,911 - -2.0 4,223,912 + +1.6 4,223,972 + +0.4 4,223,972 + +0.3 4,223,999 + PfGW456L13_3750 0.11 +0.1 4,224,000 - PfGW456L13_3750 0.11 +0.3 4,224,000 - PfGW456L13_3750 0.11 +0.2 4,224,000 - PfGW456L13_3750 0.11 +0.2 4,224,080 + PfGW456L13_3750 0.19 +0.6 4,224,080 + PfGW456L13_3750 0.19 +0.6 4,224,080 + PfGW456L13_3750 0.19 +0.6 4,224,080 + PfGW456L13_3750 0.19 -0.2 4,224,081 - PfGW456L13_3750 0.19 +0.3 4,224,081 - PfGW456L13_3750 0.19 +1.1 4,224,081 - PfGW456L13_3750 0.19 +0.8 4,224,081 - PfGW456L13_3750 0.19 -0.1 4,224,415 + PfGW456L13_3750 0.56 -1.6 4,224,415 + PfGW456L13_3750 0.56 +0.3 4,224,483 - PfGW456L13_3750 0.63 +1.2 4,224,483 - PfGW456L13_3750 0.63 +0.3 4,224,483 - PfGW456L13_3750 0.63 -0.5 4,224,483 - PfGW456L13_3750 0.63 +0.1 4,224,483 - PfGW456L13_3750 0.63 +1.8 4,224,597 - PfGW456L13_3750 0.76 +0.0 4,224,599 + PfGW456L13_3750 0.76 -1.1 4,224,599 + PfGW456L13_3750 0.76 +0.3 4,224,641 + PfGW456L13_3750 0.81 +0.4 4,224,642 - PfGW456L13_3750 0.81 -1.0 4,224,713 + PfGW456L13_3750 0.88 +1.0 4,224,714 - PfGW456L13_3750 0.88 +0.4 4,224,814 - +0.2 4,224,848 - -0.0 4,224,848 - -0.5 4,224,895 + +0.6 4,224,967 - -0.3 4,224,973 + -0.7 4,225,012 - -1.0 4,225,012 - +0.2 4,225,198 - PfGW456L13_3751 0.24 +1.2 4,225,358 + PfGW456L13_3751 0.41 +0.4 4,225,359 - PfGW456L13_3751 0.41 -2.0 4,225,359 - PfGW456L13_3751 0.41 -0.6 4,225,360 + PfGW456L13_3751 0.41 +0.6 4,225,361 - +1.0 4,225,361 - PfGW456L13_3751 0.41 +1.4 4,225,361 - PfGW456L13_3751 0.41 +0.8 4,225,361 - PfGW456L13_3751 0.41 +1.4 4,225,361 - PfGW456L13_3751 0.41 +0.2 4,225,481 + PfGW456L13_3751 0.54 -0.4 4,225,513 + PfGW456L13_3751 0.57 +0.9
Or see this region's nucleotide sequence