Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3520 and PfGW456L13_3521 are separated by 10 nucleotides PfGW456L13_3521 and PfGW456L13_3522 are separated by 3 nucleotides PfGW456L13_3522 and PfGW456L13_3523 are separated by 210 nucleotides
PfGW456L13_3520 - FIG00956261: hypothetical protein, at 3,963,560 to 3,964,321
_3520
PfGW456L13_3521 - amino acid ABC transporter, periplasmic substrate-binding protein, at 3,964,332 to 3,965,207
_3521
PfGW456L13_3522 - Cytochrome C550 (Soluble cytochrome C), at 3,965,211 to 3,965,672
_3522
PfGW456L13_3523 - FIG00953323: hypothetical protein, at 3,965,883 to 3,967,067
_3523
Position (kb)
3965
3966 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3964.212 kb on + strand, within PfGW456L13_3520 at 3964.213 kb on - strand, within PfGW456L13_3520 at 3964.213 kb on - strand, within PfGW456L13_3520 at 3964.213 kb on - strand, within PfGW456L13_3520 at 3964.213 kb on - strand, within PfGW456L13_3520 at 3964.339 kb on + strand at 3964.339 kb on + strand at 3964.339 kb on + strand at 3964.340 kb on - strand at 3964.340 kb on - strand at 3964.340 kb on - strand at 3964.340 kb on - strand at 3964.340 kb on - strand at 3964.340 kb on - strand at 3964.340 kb on - strand at 3964.378 kb on + strand at 3964.482 kb on + strand, within PfGW456L13_3521 at 3964.483 kb on - strand, within PfGW456L13_3521 at 3964.636 kb on + strand, within PfGW456L13_3521 at 3964.684 kb on + strand, within PfGW456L13_3521 at 3964.685 kb on - strand, within PfGW456L13_3521 at 3964.774 kb on + strand, within PfGW456L13_3521 at 3964.940 kb on - strand, within PfGW456L13_3521 at 3964.940 kb on - strand, within PfGW456L13_3521 at 3964.940 kb on - strand, within PfGW456L13_3521 at 3965.074 kb on + strand, within PfGW456L13_3521 at 3965.075 kb on - strand, within PfGW456L13_3521 at 3965.092 kb on + strand, within PfGW456L13_3521 at 3965.093 kb on - strand, within PfGW456L13_3521 at 3965.093 kb on - strand, within PfGW456L13_3521 at 3965.134 kb on + strand at 3965.135 kb on - strand at 3965.239 kb on + strand at 3965.240 kb on - strand at 3965.243 kb on + strand at 3965.243 kb on + strand at 3965.243 kb on + strand at 3965.244 kb on - strand at 3965.244 kb on - strand at 3965.244 kb on - strand at 3965.244 kb on - strand at 3965.296 kb on + strand, within PfGW456L13_3522 at 3965.296 kb on + strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.297 kb on - strand, within PfGW456L13_3522 at 3965.375 kb on + strand, within PfGW456L13_3522 at 3965.376 kb on - strand, within PfGW456L13_3522 at 3965.444 kb on - strand, within PfGW456L13_3522 at 3965.444 kb on - strand, within PfGW456L13_3522 at 3965.676 kb on + strand at 3965.676 kb on + strand at 3965.677 kb on - strand at 3965.677 kb on - strand at 3965.730 kb on + strand at 3965.730 kb on + strand at 3965.730 kb on + strand at 3965.730 kb on + strand at 3965.730 kb on + strand at 3965.730 kb on + strand at 3965.730 kb on + strand at 3965.731 kb on - strand at 3965.773 kb on + strand at 3965.777 kb on + strand at 3965.777 kb on + strand at 3965.777 kb on + strand at 3965.777 kb on + strand at 3965.778 kb on - strand at 3965.778 kb on - strand at 3965.788 kb on + strand at 3965.788 kb on + strand at 3965.789 kb on - strand at 3965.789 kb on - strand at 3965.792 kb on - strand at 3965.827 kb on + strand at 3965.827 kb on + strand at 3965.827 kb on + strand at 3965.828 kb on - strand at 3965.828 kb on - strand at 3965.852 kb on + strand at 3965.852 kb on + strand at 3965.852 kb on + strand at 3965.852 kb on + strand at 3965.852 kb on + strand at 3965.852 kb on + strand at 3965.853 kb on - strand at 3965.863 kb on + strand at 3965.869 kb on + strand at 3965.869 kb on + strand at 3965.870 kb on - strand at 3965.882 kb on + strand at 3965.883 kb on - strand at 3965.913 kb on + strand at 3965.913 kb on + strand at 3965.913 kb on + strand at 3966.266 kb on + strand, within PfGW456L13_3523 at 3966.267 kb on - strand, within PfGW456L13_3523 at 3966.448 kb on - strand, within PfGW456L13_3523 at 3966.448 kb on - strand, within PfGW456L13_3523 at 3966.624 kb on + strand, within PfGW456L13_3523 at 3966.624 kb on + strand, within PfGW456L13_3523 at 3966.624 kb on + strand, within PfGW456L13_3523 at 3966.625 kb on - strand, within PfGW456L13_3523 at 3966.625 kb on - strand, within PfGW456L13_3523 at 3966.625 kb on - strand, within PfGW456L13_3523 at 3966.625 kb on - strand, within PfGW456L13_3523
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 3,964,212 + PfGW456L13_3520 0.86 -2.8 3,964,213 - PfGW456L13_3520 0.86 -0.3 3,964,213 - PfGW456L13_3520 0.86 -1.3 3,964,213 - PfGW456L13_3520 0.86 +0.1 3,964,213 - PfGW456L13_3520 0.86 -1.4 3,964,339 + -0.6 3,964,339 + -1.2 3,964,339 + -0.6 3,964,340 - +0.5 3,964,340 - +0.9 3,964,340 - -0.1 3,964,340 - +0.9 3,964,340 - -2.6 3,964,340 - +0.6 3,964,340 - -0.0 3,964,378 + -0.1 3,964,482 + PfGW456L13_3521 0.17 -0.2 3,964,483 - PfGW456L13_3521 0.17 +1.0 3,964,636 + PfGW456L13_3521 0.35 -1.9 3,964,684 + PfGW456L13_3521 0.40 +0.5 3,964,685 - PfGW456L13_3521 0.40 +1.3 3,964,774 + PfGW456L13_3521 0.50 +1.3 3,964,940 - PfGW456L13_3521 0.69 +0.0 3,964,940 - PfGW456L13_3521 0.69 +0.3 3,964,940 - PfGW456L13_3521 0.69 +0.5 3,965,074 + PfGW456L13_3521 0.85 -1.1 3,965,075 - PfGW456L13_3521 0.85 -0.4 3,965,092 + PfGW456L13_3521 0.87 -0.4 3,965,093 - PfGW456L13_3521 0.87 +0.3 3,965,093 - PfGW456L13_3521 0.87 +0.3 3,965,134 + -1.1 3,965,135 - +1.1 3,965,239 + -0.3 3,965,240 - -0.1 3,965,243 + -1.4 3,965,243 + +0.6 3,965,243 + -0.0 3,965,244 - +0.1 3,965,244 - -0.1 3,965,244 - -0.1 3,965,244 - -0.6 3,965,296 + PfGW456L13_3522 0.18 +0.4 3,965,296 + PfGW456L13_3522 0.18 +0.2 3,965,297 - PfGW456L13_3522 0.19 +1.2 3,965,297 - PfGW456L13_3522 0.19 +0.1 3,965,297 - PfGW456L13_3522 0.19 +1.0 3,965,297 - PfGW456L13_3522 0.19 -0.8 3,965,297 - PfGW456L13_3522 0.19 -0.4 3,965,297 - PfGW456L13_3522 0.19 -0.4 3,965,297 - PfGW456L13_3522 0.19 +0.0 3,965,297 - PfGW456L13_3522 0.19 +0.4 3,965,297 - PfGW456L13_3522 0.19 +0.7 3,965,375 + PfGW456L13_3522 0.35 +0.8 3,965,376 - PfGW456L13_3522 0.36 +1.3 3,965,444 - PfGW456L13_3522 0.50 +0.7 3,965,444 - PfGW456L13_3522 0.50 -0.1 3,965,676 + -1.2 3,965,676 + -0.1 3,965,677 - -0.1 3,965,677 - -1.0 3,965,730 + +1.1 3,965,730 + -0.7 3,965,730 + +0.3 3,965,730 + -0.3 3,965,730 + +0.3 3,965,730 + -0.4 3,965,730 + +0.3 3,965,731 - -0.1 3,965,773 + -0.8 3,965,777 + -0.8 3,965,777 + -0.3 3,965,777 + -0.3 3,965,777 + -0.3 3,965,778 - -1.1 3,965,778 - +0.1 3,965,788 + -0.9 3,965,788 + -0.4 3,965,789 - -0.1 3,965,789 - -0.5 3,965,792 - -0.6 3,965,827 + -0.6 3,965,827 + +0.2 3,965,827 + -0.1 3,965,828 - +1.2 3,965,828 - -0.5 3,965,852 + +0.3 3,965,852 + +1.0 3,965,852 + +0.1 3,965,852 + +0.2 3,965,852 + +0.4 3,965,852 + +0.4 3,965,853 - +1.4 3,965,863 + +0.1 3,965,869 + +0.2 3,965,869 + -1.4 3,965,870 - -0.4 3,965,882 + +0.4 3,965,883 - -0.1 3,965,913 + +0.0 3,965,913 + +1.4 3,965,913 + -0.7 3,966,266 + PfGW456L13_3523 0.32 -0.3 3,966,267 - PfGW456L13_3523 0.32 -1.1 3,966,448 - PfGW456L13_3523 0.48 -0.6 3,966,448 - PfGW456L13_3523 0.48 +0.9 3,966,624 + PfGW456L13_3523 0.63 +0.1 3,966,624 + PfGW456L13_3523 0.63 -0.0 3,966,624 + PfGW456L13_3523 0.63 +0.5 3,966,625 - PfGW456L13_3523 0.63 +0.5 3,966,625 - PfGW456L13_3523 0.63 +0.9 3,966,625 - PfGW456L13_3523 0.63 +0.1 3,966,625 - PfGW456L13_3523 0.63 -0.9
Or see this region's nucleotide sequence