Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3465 and PfGW456L13_3466 are separated by 17 nucleotides PfGW456L13_3466 and PfGW456L13_3467 are separated by 321 nucleotides PfGW456L13_3467 and PfGW456L13_3468 are separated by 67 nucleotides
PfGW456L13_3465 - Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit, at 3,891,199 to 3,892,227
_3465
PfGW456L13_3466 - Probable vanillate O-demethylase oxygenase subunit oxidoreductase protein (EC 1.14.13.-), at 3,892,245 to 3,893,186
_3466
PfGW456L13_3467 - Transcriptional regulator, MarR family, at 3,893,508 to 3,893,987
_3467
PfGW456L13_3468 - Multidrug resistance protein A, at 3,894,055 to 3,895,161
_3468
Position (kb)
3892
3893
3894 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3891.371 kb on + strand, within PfGW456L13_3465 at 3891.371 kb on + strand, within PfGW456L13_3465 at 3891.422 kb on + strand, within PfGW456L13_3465 at 3891.422 kb on + strand, within PfGW456L13_3465 at 3891.422 kb on + strand, within PfGW456L13_3465 at 3891.423 kb on - strand, within PfGW456L13_3465 at 3891.423 kb on - strand, within PfGW456L13_3465 at 3891.423 kb on - strand, within PfGW456L13_3465 at 3891.423 kb on - strand, within PfGW456L13_3465 at 3891.444 kb on - strand, within PfGW456L13_3465 at 3891.498 kb on + strand at 3891.498 kb on + strand, within PfGW456L13_3465 at 3891.498 kb on + strand, within PfGW456L13_3465 at 3891.498 kb on + strand, within PfGW456L13_3465 at 3891.498 kb on + strand, within PfGW456L13_3465 at 3891.498 kb on + strand, within PfGW456L13_3465 at 3891.499 kb on - strand, within PfGW456L13_3465 at 3891.499 kb on - strand, within PfGW456L13_3465 at 3891.499 kb on - strand, within PfGW456L13_3465 at 3891.499 kb on - strand, within PfGW456L13_3465 at 3891.542 kb on + strand, within PfGW456L13_3465 at 3891.563 kb on + strand, within PfGW456L13_3465 at 3891.621 kb on - strand, within PfGW456L13_3465 at 3891.681 kb on + strand, within PfGW456L13_3465 at 3891.837 kb on + strand, within PfGW456L13_3465 at 3891.837 kb on + strand, within PfGW456L13_3465 at 3891.838 kb on - strand, within PfGW456L13_3465 at 3891.875 kb on - strand, within PfGW456L13_3465 at 3891.886 kb on - strand, within PfGW456L13_3465 at 3891.965 kb on + strand at 3891.965 kb on + strand, within PfGW456L13_3465 at 3891.997 kb on + strand, within PfGW456L13_3465 at 3891.997 kb on + strand, within PfGW456L13_3465 at 3891.998 kb on - strand, within PfGW456L13_3465 at 3891.998 kb on - strand, within PfGW456L13_3465 at 3892.067 kb on + strand, within PfGW456L13_3465 at 3892.067 kb on + strand, within PfGW456L13_3465 at 3892.068 kb on - strand, within PfGW456L13_3465 at 3892.068 kb on - strand, within PfGW456L13_3465 at 3892.071 kb on - strand, within PfGW456L13_3465 at 3892.157 kb on + strand at 3892.158 kb on - strand at 3892.158 kb on - strand at 3892.745 kb on - strand at 3892.901 kb on - strand, within PfGW456L13_3466 at 3892.911 kb on + strand, within PfGW456L13_3466 at 3893.254 kb on + strand at 3893.255 kb on - strand at 3893.255 kb on - strand at 3893.322 kb on + strand at 3893.322 kb on + strand at 3893.322 kb on + strand at 3893.322 kb on + strand at 3893.323 kb on - strand at 3893.323 kb on - strand at 3893.323 kb on - strand at 3893.365 kb on - strand at 3893.365 kb on - strand at 3893.459 kb on + strand at 3893.459 kb on + strand at 3893.460 kb on - strand at 3893.470 kb on - strand at 3893.475 kb on + strand at 3893.562 kb on - strand, within PfGW456L13_3467 at 3893.892 kb on + strand, within PfGW456L13_3467 at 3893.893 kb on - strand, within PfGW456L13_3467 at 3893.903 kb on + strand, within PfGW456L13_3467 at 3893.903 kb on + strand, within PfGW456L13_3467 at 3893.903 kb on + strand, within PfGW456L13_3467 at 3893.903 kb on + strand, within PfGW456L13_3467 at 3893.904 kb on - strand, within PfGW456L13_3467 at 3894.153 kb on + strand at 3894.153 kb on + strand at 3894.153 kb on + strand at 3894.154 kb on - strand at 3894.181 kb on + strand, within PfGW456L13_3468 at 3894.181 kb on + strand, within PfGW456L13_3468 at 3894.181 kb on + strand, within PfGW456L13_3468 at 3894.182 kb on - strand, within PfGW456L13_3468 at 3894.182 kb on - strand, within PfGW456L13_3468
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 3,891,371 + PfGW456L13_3465 0.17 -0.1 3,891,371 + PfGW456L13_3465 0.17 +0.1 3,891,422 + PfGW456L13_3465 0.22 -0.9 3,891,422 + PfGW456L13_3465 0.22 +1.1 3,891,422 + PfGW456L13_3465 0.22 +0.5 3,891,423 - PfGW456L13_3465 0.22 -1.2 3,891,423 - PfGW456L13_3465 0.22 +0.5 3,891,423 - PfGW456L13_3465 0.22 +0.5 3,891,423 - PfGW456L13_3465 0.22 -1.3 3,891,444 - PfGW456L13_3465 0.24 -0.1 3,891,498 + -0.6 3,891,498 + PfGW456L13_3465 0.29 +0.7 3,891,498 + PfGW456L13_3465 0.29 +0.8 3,891,498 + PfGW456L13_3465 0.29 +0.4 3,891,498 + PfGW456L13_3465 0.29 +0.5 3,891,498 + PfGW456L13_3465 0.29 -0.6 3,891,499 - PfGW456L13_3465 0.29 +0.6 3,891,499 - PfGW456L13_3465 0.29 +0.5 3,891,499 - PfGW456L13_3465 0.29 -0.1 3,891,499 - PfGW456L13_3465 0.29 +0.7 3,891,542 + PfGW456L13_3465 0.33 +0.9 3,891,563 + PfGW456L13_3465 0.35 +0.4 3,891,621 - PfGW456L13_3465 0.41 -0.3 3,891,681 + PfGW456L13_3465 0.47 -2.0 3,891,837 + PfGW456L13_3465 0.62 +0.8 3,891,837 + PfGW456L13_3465 0.62 +0.4 3,891,838 - PfGW456L13_3465 0.62 +0.5 3,891,875 - PfGW456L13_3465 0.66 -0.1 3,891,886 - PfGW456L13_3465 0.67 -0.1 3,891,965 + +1.0 3,891,965 + PfGW456L13_3465 0.74 +0.5 3,891,997 + PfGW456L13_3465 0.78 +1.1 3,891,997 + PfGW456L13_3465 0.78 +0.8 3,891,998 - PfGW456L13_3465 0.78 +0.5 3,891,998 - PfGW456L13_3465 0.78 -0.6 3,892,067 + PfGW456L13_3465 0.84 -0.3 3,892,067 + PfGW456L13_3465 0.84 -0.2 3,892,068 - PfGW456L13_3465 0.84 -0.4 3,892,068 - PfGW456L13_3465 0.84 +0.1 3,892,071 - PfGW456L13_3465 0.85 -0.2 3,892,157 + +0.9 3,892,158 - +1.3 3,892,158 - -0.9 3,892,745 - -1.6 3,892,901 - PfGW456L13_3466 0.70 +0.3 3,892,911 + PfGW456L13_3466 0.71 +0.7 3,893,254 + -0.0 3,893,255 - -0.2 3,893,255 - -0.6 3,893,322 + +0.0 3,893,322 + -0.3 3,893,322 + -0.5 3,893,322 + +1.1 3,893,323 - +0.6 3,893,323 - -1.0 3,893,323 - +0.2 3,893,365 - -0.6 3,893,365 - +0.1 3,893,459 + +0.4 3,893,459 + -2.8 3,893,460 - -0.4 3,893,470 - +0.6 3,893,475 + -0.5 3,893,562 - PfGW456L13_3467 0.11 -1.1 3,893,892 + PfGW456L13_3467 0.80 +0.8 3,893,893 - PfGW456L13_3467 0.80 -0.4 3,893,903 + PfGW456L13_3467 0.82 -2.2 3,893,903 + PfGW456L13_3467 0.82 +0.5 3,893,903 + PfGW456L13_3467 0.82 -0.1 3,893,903 + PfGW456L13_3467 0.82 +1.2 3,893,904 - PfGW456L13_3467 0.82 -0.2 3,894,153 + -0.3 3,894,153 + -0.5 3,894,153 + -1.3 3,894,154 - +0.3 3,894,181 + PfGW456L13_3468 0.11 +0.8 3,894,181 + PfGW456L13_3468 0.11 -1.1 3,894,181 + PfGW456L13_3468 0.11 +0.8 3,894,182 - PfGW456L13_3468 0.11 +0.6 3,894,182 - PfGW456L13_3468 0.11 +0.2
Or see this region's nucleotide sequence