Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3371 and PfGW456L13_3372 are separated by 251 nucleotides PfGW456L13_3372 and PfGW456L13_3373 are separated by 37 nucleotides PfGW456L13_3373 and PfGW456L13_3374 are separated by 102 nucleotides
PfGW456L13_3371 - Glycine cleavage system transcriptional activator, at 3,784,355 to 3,785,239
_3371
PfGW456L13_3372 - hypothetical protein, at 3,785,491 to 3,785,625
_3372
PfGW456L13_3373 - hypothetical protein, at 3,785,663 to 3,786,157
_3373
PfGW456L13_3374 - TonB-dependent siderophore receptor, at 3,786,260 to 3,788,509
_3374
Position (kb)
3785
3786 Strain fitness (log2 ratio)
-1
0
1 at 3784.584 kb on + strand, within PfGW456L13_3371 at 3784.584 kb on + strand, within PfGW456L13_3371 at 3784.584 kb on + strand at 3784.584 kb on + strand, within PfGW456L13_3371 at 3784.624 kb on + strand, within PfGW456L13_3371 at 3784.625 kb on - strand, within PfGW456L13_3371 at 3784.625 kb on - strand, within PfGW456L13_3371 at 3784.625 kb on - strand, within PfGW456L13_3371 at 3784.773 kb on + strand, within PfGW456L13_3371 at 3784.860 kb on + strand, within PfGW456L13_3371 at 3784.860 kb on + strand, within PfGW456L13_3371 at 3785.391 kb on + strand at 3785.391 kb on + strand at 3785.393 kb on + strand at 3785.394 kb on - strand at 3785.394 kb on - strand at 3785.394 kb on - strand at 3785.394 kb on - strand at 3785.394 kb on - strand at 3785.394 kb on - strand at 3785.394 kb on - strand at 3785.402 kb on + strand at 3785.416 kb on + strand at 3785.416 kb on + strand at 3785.610 kb on - strand, within PfGW456L13_3372 at 3785.610 kb on - strand, within PfGW456L13_3372 at 3785.610 kb on - strand, within PfGW456L13_3372 at 3785.616 kb on + strand at 3785.616 kb on + strand at 3785.623 kb on + strand at 3785.623 kb on + strand at 3785.623 kb on + strand at 3785.624 kb on - strand at 3785.624 kb on - strand at 3785.624 kb on - strand at 3785.637 kb on + strand at 3785.727 kb on - strand, within PfGW456L13_3373 at 3785.744 kb on + strand, within PfGW456L13_3373 at 3785.744 kb on + strand, within PfGW456L13_3373 at 3785.745 kb on - strand, within PfGW456L13_3373 at 3785.849 kb on + strand, within PfGW456L13_3373 at 3785.849 kb on + strand, within PfGW456L13_3373 at 3785.849 kb on + strand, within PfGW456L13_3373 at 3786.098 kb on + strand, within PfGW456L13_3373 at 3786.099 kb on - strand, within PfGW456L13_3373 at 3786.449 kb on - strand at 3786.470 kb on + strand at 3786.470 kb on + strand at 3786.470 kb on + strand at 3786.471 kb on - strand at 3786.471 kb on - strand at 3786.471 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 3,784,584 + PfGW456L13_3371 0.26 +0.6 3,784,584 + PfGW456L13_3371 0.26 -0.7 3,784,584 + -1.3 3,784,584 + PfGW456L13_3371 0.26 +0.3 3,784,624 + PfGW456L13_3371 0.30 +0.0 3,784,625 - PfGW456L13_3371 0.31 -0.5 3,784,625 - PfGW456L13_3371 0.31 +0.0 3,784,625 - PfGW456L13_3371 0.31 +0.7 3,784,773 + PfGW456L13_3371 0.47 +0.5 3,784,860 + PfGW456L13_3371 0.57 -0.9 3,784,860 + PfGW456L13_3371 0.57 +0.1 3,785,391 + +0.7 3,785,391 + -0.7 3,785,393 + +0.5 3,785,394 - +0.9 3,785,394 - +0.2 3,785,394 - -0.0 3,785,394 - -1.1 3,785,394 - -1.0 3,785,394 - +0.2 3,785,394 - +0.2 3,785,402 + -0.9 3,785,416 + -0.4 3,785,416 + +0.0 3,785,610 - PfGW456L13_3372 0.88 +0.8 3,785,610 - PfGW456L13_3372 0.88 +0.2 3,785,610 - PfGW456L13_3372 0.88 +0.2 3,785,616 + -0.1 3,785,616 + -0.6 3,785,623 + -0.8 3,785,623 + +0.4 3,785,623 + -0.2 3,785,624 - -0.1 3,785,624 - +0.6 3,785,624 - +0.0 3,785,637 + +1.3 3,785,727 - PfGW456L13_3373 0.13 -0.7 3,785,744 + PfGW456L13_3373 0.16 +1.7 3,785,744 + PfGW456L13_3373 0.16 +0.2 3,785,745 - PfGW456L13_3373 0.17 -1.3 3,785,849 + PfGW456L13_3373 0.38 -0.8 3,785,849 + PfGW456L13_3373 0.38 -0.7 3,785,849 + PfGW456L13_3373 0.38 +0.7 3,786,098 + PfGW456L13_3373 0.88 -0.1 3,786,099 - PfGW456L13_3373 0.88 -0.1 3,786,449 - +0.1 3,786,470 + -0.1 3,786,470 + +0.3 3,786,470 + -0.5 3,786,471 - -0.2 3,786,471 - -0.5 3,786,471 - +1.6
Or see this region's nucleotide sequence