Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3300 and PfGW456L13_3301 are separated by 5 nucleotides PfGW456L13_3301 and PfGW456L13_3302 overlap by 4 nucleotides PfGW456L13_3302 and PfGW456L13_3303 overlap by 8 nucleotides
PfGW456L13_3300 - MoxR-like ATPase in aerotolerance operon, at 3,709,035 to 3,709,994
_3300
PfGW456L13_3301 - hypothetical protein PA3071, at 3,710,000 to 3,710,944
_3301
PfGW456L13_3302 - FIG00954674: hypothetical protein, at 3,710,941 to 3,711,435
_3302
PfGW456L13_3303 - BatA (Bacteroides aerotolerance operon), at 3,711,428 to 3,712,510
_3303
Position (kb)
3710
3711
3712 Strain fitness (log2 ratio)
-1
0
1 at 3709.982 kb on - strand at 3710.181 kb on - strand, within PfGW456L13_3301 at 3710.181 kb on - strand, within PfGW456L13_3301 at 3710.417 kb on + strand, within PfGW456L13_3301 at 3710.417 kb on + strand, within PfGW456L13_3301 at 3710.418 kb on - strand, within PfGW456L13_3301 at 3710.418 kb on - strand, within PfGW456L13_3301 at 3710.418 kb on - strand, within PfGW456L13_3301 at 3710.435 kb on + strand, within PfGW456L13_3301 at 3710.435 kb on + strand at 3710.436 kb on - strand, within PfGW456L13_3301 at 3710.436 kb on - strand, within PfGW456L13_3301 at 3710.730 kb on + strand, within PfGW456L13_3301 at 3710.730 kb on + strand, within PfGW456L13_3301 at 3710.730 kb on + strand, within PfGW456L13_3301 at 3710.730 kb on + strand, within PfGW456L13_3301 at 3710.731 kb on - strand, within PfGW456L13_3301 at 3710.731 kb on - strand, within PfGW456L13_3301 at 3710.909 kb on + strand at 3710.973 kb on - strand at 3711.075 kb on + strand at 3711.352 kb on + strand, within PfGW456L13_3302 at 3711.352 kb on + strand, within PfGW456L13_3302 at 3711.492 kb on + strand at 3711.492 kb on + strand at 3711.492 kb on + strand at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.864 kb on - strand, within PfGW456L13_3303 at 3711.864 kb on - strand, within PfGW456L13_3303 at 3712.229 kb on + strand, within PfGW456L13_3303 at 3712.229 kb on + strand, within PfGW456L13_3303 at 3712.230 kb on - strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 3,709,982 - -0.5 3,710,181 - PfGW456L13_3301 0.19 +0.2 3,710,181 - PfGW456L13_3301 0.19 -1.5 3,710,417 + PfGW456L13_3301 0.44 +1.1 3,710,417 + PfGW456L13_3301 0.44 +0.8 3,710,418 - PfGW456L13_3301 0.44 -1.4 3,710,418 - PfGW456L13_3301 0.44 -0.4 3,710,418 - PfGW456L13_3301 0.44 +0.5 3,710,435 + PfGW456L13_3301 0.46 +1.3 3,710,435 + +1.1 3,710,436 - PfGW456L13_3301 0.46 -0.8 3,710,436 - PfGW456L13_3301 0.46 -0.1 3,710,730 + PfGW456L13_3301 0.77 +0.1 3,710,730 + PfGW456L13_3301 0.77 +0.2 3,710,730 + PfGW456L13_3301 0.77 +1.1 3,710,730 + PfGW456L13_3301 0.77 +0.3 3,710,731 - PfGW456L13_3301 0.77 +0.8 3,710,731 - PfGW456L13_3301 0.77 -0.7 3,710,909 + -1.5 3,710,973 - +1.3 3,711,075 + +1.1 3,711,352 + PfGW456L13_3302 0.83 +0.3 3,711,352 + PfGW456L13_3302 0.83 +1.1 3,711,492 + +0.1 3,711,492 + +1.5 3,711,492 + +0.4 3,711,615 + PfGW456L13_3303 0.17 -0.7 3,711,615 + PfGW456L13_3303 0.17 +0.1 3,711,615 + PfGW456L13_3303 0.17 +0.3 3,711,615 + PfGW456L13_3303 0.17 +0.2 3,711,615 + PfGW456L13_3303 0.17 +1.5 3,711,864 - PfGW456L13_3303 0.40 -0.3 3,711,864 - PfGW456L13_3303 0.40 +1.1 3,712,229 + PfGW456L13_3303 0.74 +0.6 3,712,229 + PfGW456L13_3303 0.74 +0.3 3,712,230 - PfGW456L13_3303 0.74 +0.9 3,712,337 + PfGW456L13_3303 0.84 -0.3 3,712,337 + PfGW456L13_3303 0.84 -0.7 3,712,337 + PfGW456L13_3303 0.84 +0.9 3,712,337 + PfGW456L13_3303 0.84 +0.5 3,712,337 + PfGW456L13_3303 0.84 +1.0 3,712,338 - PfGW456L13_3303 0.84 +0.4 3,712,338 - PfGW456L13_3303 0.84 +0.7 3,712,338 - PfGW456L13_3303 0.84 +0.7 3,712,338 - PfGW456L13_3303 0.84 +0.9 3,712,338 - PfGW456L13_3303 0.84 +0.5 3,712,338 - PfGW456L13_3303 0.84 +1.2
Or see this region's nucleotide sequence