Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3009 and PfGW456L13_3010 are separated by 61 nucleotides PfGW456L13_3010 and PfGW456L13_3011 overlap by 18 nucleotides PfGW456L13_3011 and PfGW456L13_3012 are separated by 15 nucleotides PfGW456L13_3012 and PfGW456L13_3013 are separated by 1 nucleotides PfGW456L13_3013 and PfGW456L13_3014 are separated by 357 nucleotides
PfGW456L13_3009 - Fap protein with C39 domain, at 3,352,617 to 3,353,297
_3009
PfGW456L13_3010 - Fap amyloid fibril major component, at 3,353,359 to 3,354,174
_3010
PfGW456L13_3011 - hypothetical protein, at 3,354,157 to 3,354,273
_3011
PfGW456L13_3012 - Fap amyloid fibril minor component, at 3,354,289 to 3,354,867
_3012
PfGW456L13_3013 - Fap unknown function protein, at 3,354,869 to 3,355,306
_3013
PfGW456L13_3014 - Ribosylnicotinamide kinase (EC 2.7.1.22), at 3,355,664 to 3,356,188
_3014
Position (kb)
3354
3355 Strain fitness (log2 ratio)
-1
0
1 at 3353.291 kb on + strand at 3353.291 kb on + strand at 3353.291 kb on + strand at 3353.292 kb on - strand at 3353.292 kb on - strand at 3353.292 kb on - strand at 3353.361 kb on - strand at 3353.428 kb on + strand at 3353.428 kb on + strand at 3353.428 kb on + strand at 3353.428 kb on + strand at 3353.428 kb on + strand at 3353.428 kb on + strand at 3353.429 kb on - strand at 3353.429 kb on - strand at 3353.429 kb on - strand at 3353.429 kb on - strand at 3353.429 kb on - strand at 3353.536 kb on + strand, within PfGW456L13_3010 at 3353.536 kb on + strand, within PfGW456L13_3010 at 3353.537 kb on - strand, within PfGW456L13_3010 at 3353.555 kb on - strand, within PfGW456L13_3010 at 3353.659 kb on + strand, within PfGW456L13_3010 at 3353.754 kb on + strand, within PfGW456L13_3010 at 3353.754 kb on + strand, within PfGW456L13_3010 at 3353.964 kb on + strand, within PfGW456L13_3010 at 3353.973 kb on + strand, within PfGW456L13_3010 at 3353.974 kb on - strand, within PfGW456L13_3010 at 3354.001 kb on + strand, within PfGW456L13_3010 at 3354.001 kb on + strand, within PfGW456L13_3010 at 3354.057 kb on + strand, within PfGW456L13_3010 at 3354.057 kb on + strand, within PfGW456L13_3010 at 3354.058 kb on - strand, within PfGW456L13_3010 at 3354.245 kb on + strand, within PfGW456L13_3011 at 3354.245 kb on + strand, within PfGW456L13_3011 at 3354.245 kb on + strand, within PfGW456L13_3011 at 3354.245 kb on + strand, within PfGW456L13_3011 at 3354.246 kb on - strand, within PfGW456L13_3011 at 3354.263 kb on + strand at 3354.263 kb on + strand at 3354.263 kb on + strand at 3354.263 kb on + strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.264 kb on - strand at 3354.319 kb on - strand at 3354.477 kb on + strand, within PfGW456L13_3012 at 3354.582 kb on + strand, within PfGW456L13_3012 at 3354.582 kb on + strand, within PfGW456L13_3012 at 3354.640 kb on - strand, within PfGW456L13_3012 at 3354.765 kb on + strand, within PfGW456L13_3012 at 3354.847 kb on + strand at 3354.847 kb on + strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.848 kb on - strand at 3354.985 kb on + strand, within PfGW456L13_3013 at 3354.985 kb on + strand, within PfGW456L13_3013 at 3355.524 kb on - strand at 3355.535 kb on - strand at 3355.535 kb on - strand at 3355.535 kb on - strand at 3355.568 kb on + strand at 3355.568 kb on + strand at 3355.733 kb on + strand, within PfGW456L13_3014 at 3355.734 kb on - strand, within PfGW456L13_3014 at 3355.734 kb on - strand, within PfGW456L13_3014
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 3,353,291 + -0.4 3,353,291 + -0.7 3,353,291 + -0.9 3,353,292 - +0.6 3,353,292 - -0.1 3,353,292 - -1.1 3,353,361 - +0.2 3,353,428 + +0.2 3,353,428 + +0.7 3,353,428 + +0.4 3,353,428 + -0.3 3,353,428 + +0.2 3,353,428 + -0.1 3,353,429 - -0.6 3,353,429 - +0.8 3,353,429 - +0.4 3,353,429 - -0.7 3,353,429 - +0.2 3,353,536 + PfGW456L13_3010 0.22 -0.2 3,353,536 + PfGW456L13_3010 0.22 +0.2 3,353,537 - PfGW456L13_3010 0.22 -0.4 3,353,555 - PfGW456L13_3010 0.24 -0.0 3,353,659 + PfGW456L13_3010 0.37 +0.1 3,353,754 + PfGW456L13_3010 0.48 -0.9 3,353,754 + PfGW456L13_3010 0.48 -0.1 3,353,964 + PfGW456L13_3010 0.74 +0.2 3,353,973 + PfGW456L13_3010 0.75 -0.4 3,353,974 - PfGW456L13_3010 0.75 +0.2 3,354,001 + PfGW456L13_3010 0.79 +0.2 3,354,001 + PfGW456L13_3010 0.79 +0.9 3,354,057 + PfGW456L13_3010 0.86 +0.3 3,354,057 + PfGW456L13_3010 0.86 +1.1 3,354,058 - PfGW456L13_3010 0.86 +0.2 3,354,245 + PfGW456L13_3011 0.75 +0.9 3,354,245 + PfGW456L13_3011 0.75 -1.5 3,354,245 + PfGW456L13_3011 0.75 +0.2 3,354,245 + PfGW456L13_3011 0.75 -0.3 3,354,246 - PfGW456L13_3011 0.76 -0.3 3,354,263 + -0.1 3,354,263 + -0.5 3,354,263 + +0.7 3,354,263 + -1.6 3,354,264 - -0.3 3,354,264 - -1.1 3,354,264 - -0.8 3,354,264 - +0.2 3,354,264 - +0.7 3,354,264 - +0.6 3,354,264 - -1.3 3,354,264 - -0.2 3,354,264 - -0.1 3,354,264 - -0.1 3,354,319 - -0.5 3,354,477 + PfGW456L13_3012 0.32 +1.0 3,354,582 + PfGW456L13_3012 0.51 +1.0 3,354,582 + PfGW456L13_3012 0.51 -0.6 3,354,640 - PfGW456L13_3012 0.61 +1.0 3,354,765 + PfGW456L13_3012 0.82 -1.7 3,354,847 + +0.4 3,354,847 + -0.1 3,354,848 - -1.2 3,354,848 - -1.1 3,354,848 - -0.4 3,354,848 - -0.2 3,354,848 - +0.1 3,354,848 - +0.3 3,354,848 - +0.6 3,354,848 - +1.4 3,354,848 - -0.6 3,354,848 - -0.9 3,354,985 + PfGW456L13_3013 0.26 +1.1 3,354,985 + PfGW456L13_3013 0.26 +0.6 3,355,524 - +0.2 3,355,535 - +1.1 3,355,535 - -0.1 3,355,535 - +0.9 3,355,568 + +0.2 3,355,568 + -0.4 3,355,733 + PfGW456L13_3014 0.13 +1.3 3,355,734 - PfGW456L13_3014 0.13 +0.8 3,355,734 - PfGW456L13_3014 0.13 -0.3
Or see this region's nucleotide sequence