Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2966 and PfGW456L13_2967 are separated by 15 nucleotides PfGW456L13_2967 and PfGW456L13_2968 are separated by 7 nucleotides PfGW456L13_2968 and PfGW456L13_2969 are separated by 156 nucleotides PfGW456L13_2969 and PfGW456L13_2970 are separated by 8 nucleotides PfGW456L13_2970 and PfGW456L13_2971 are separated by 249 nucleotides
PfGW456L13_2966 - Aldo-keto reductase, at 3,308,380 to 3,309,309
_2966
PfGW456L13_2967 - LysR family transcriptional regulator YcjZ, at 3,309,325 to 3,309,489
_2967
PfGW456L13_2968 - hypothetical protein, at 3,309,497 to 3,309,634
_2968
PfGW456L13_2969 - FIG00956898: hypothetical protein, at 3,309,791 to 3,309,979
_2969
PfGW456L13_2970 - Fe2+/Zn2+ uptake regulation proteins, at 3,309,988 to 3,310,359
_2970
PfGW456L13_2971 - Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching, at 3,310,609 to 3,312,957
_2971
Position (kb)
3309
3310 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3308.516 kb on + strand, within PfGW456L13_2966 at 3308.516 kb on + strand, within PfGW456L13_2966 at 3308.517 kb on - strand, within PfGW456L13_2966 at 3308.517 kb on - strand, within PfGW456L13_2966 at 3308.520 kb on + strand, within PfGW456L13_2966 at 3308.520 kb on + strand, within PfGW456L13_2966 at 3308.520 kb on + strand, within PfGW456L13_2966 at 3308.520 kb on + strand, within PfGW456L13_2966 at 3308.520 kb on + strand, within PfGW456L13_2966 at 3308.520 kb on + strand, within PfGW456L13_2966 at 3308.520 kb on + strand, within PfGW456L13_2966 at 3308.520 kb on + strand, within PfGW456L13_2966 at 3308.521 kb on - strand, within PfGW456L13_2966 at 3308.521 kb on - strand, within PfGW456L13_2966 at 3308.521 kb on - strand, within PfGW456L13_2966 at 3308.521 kb on - strand, within PfGW456L13_2966 at 3308.521 kb on - strand, within PfGW456L13_2966 at 3308.521 kb on - strand, within PfGW456L13_2966 at 3308.521 kb on - strand, within PfGW456L13_2966 at 3308.552 kb on + strand, within PfGW456L13_2966 at 3308.552 kb on + strand, within PfGW456L13_2966 at 3308.552 kb on + strand, within PfGW456L13_2966 at 3308.552 kb on + strand, within PfGW456L13_2966 at 3308.552 kb on + strand, within PfGW456L13_2966 at 3308.553 kb on - strand, within PfGW456L13_2966 at 3308.626 kb on + strand, within PfGW456L13_2966 at 3308.626 kb on + strand, within PfGW456L13_2966 at 3308.626 kb on + strand, within PfGW456L13_2966 at 3308.626 kb on + strand, within PfGW456L13_2966 at 3308.626 kb on + strand, within PfGW456L13_2966 at 3308.626 kb on + strand, within PfGW456L13_2966 at 3308.626 kb on + strand, within PfGW456L13_2966 at 3308.627 kb on - strand, within PfGW456L13_2966 at 3308.627 kb on - strand, within PfGW456L13_2966 at 3308.627 kb on - strand, within PfGW456L13_2966 at 3308.627 kb on - strand, within PfGW456L13_2966 at 3308.627 kb on - strand, within PfGW456L13_2966 at 3308.760 kb on + strand, within PfGW456L13_2966 at 3308.760 kb on + strand, within PfGW456L13_2966 at 3308.760 kb on + strand, within PfGW456L13_2966 at 3308.760 kb on + strand, within PfGW456L13_2966 at 3308.760 kb on + strand, within PfGW456L13_2966 at 3308.761 kb on - strand, within PfGW456L13_2966 at 3308.761 kb on - strand, within PfGW456L13_2966 at 3308.761 kb on - strand, within PfGW456L13_2966 at 3308.761 kb on - strand, within PfGW456L13_2966 at 3308.761 kb on - strand, within PfGW456L13_2966 at 3308.763 kb on - strand, within PfGW456L13_2966 at 3308.841 kb on - strand, within PfGW456L13_2966 at 3308.921 kb on + strand, within PfGW456L13_2966 at 3309.005 kb on + strand, within PfGW456L13_2966 at 3309.005 kb on + strand, within PfGW456L13_2966 at 3309.005 kb on + strand, within PfGW456L13_2966 at 3309.005 kb on + strand, within PfGW456L13_2966 at 3309.006 kb on - strand, within PfGW456L13_2966 at 3309.006 kb on - strand, within PfGW456L13_2966 at 3309.006 kb on - strand, within PfGW456L13_2966 at 3309.008 kb on + strand, within PfGW456L13_2966 at 3309.008 kb on + strand, within PfGW456L13_2966 at 3309.008 kb on + strand, within PfGW456L13_2966 at 3309.008 kb on + strand, within PfGW456L13_2966 at 3309.009 kb on - strand, within PfGW456L13_2966 at 3309.009 kb on - strand, within PfGW456L13_2966 at 3309.009 kb on - strand, within PfGW456L13_2966 at 3309.009 kb on - strand, within PfGW456L13_2966 at 3309.009 kb on - strand, within PfGW456L13_2966 at 3309.068 kb on + strand, within PfGW456L13_2966 at 3309.068 kb on + strand, within PfGW456L13_2966 at 3309.068 kb on + strand, within PfGW456L13_2966 at 3309.069 kb on - strand, within PfGW456L13_2966 at 3309.069 kb on - strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.206 kb on + strand, within PfGW456L13_2966 at 3309.207 kb on - strand, within PfGW456L13_2966 at 3309.207 kb on - strand, within PfGW456L13_2966 at 3309.207 kb on - strand, within PfGW456L13_2966 at 3309.207 kb on - strand, within PfGW456L13_2966 at 3309.207 kb on - strand, within PfGW456L13_2966 at 3309.207 kb on - strand, within PfGW456L13_2966 at 3309.207 kb on - strand, within PfGW456L13_2966 at 3309.210 kb on + strand, within PfGW456L13_2966 at 3309.210 kb on + strand, within PfGW456L13_2966 at 3309.211 kb on - strand, within PfGW456L13_2966 at 3309.211 kb on - strand, within PfGW456L13_2966 at 3309.211 kb on - strand, within PfGW456L13_2966 at 3309.211 kb on - strand, within PfGW456L13_2966 at 3309.296 kb on + strand at 3309.380 kb on - strand, within PfGW456L13_2967 at 3309.499 kb on - strand at 3309.510 kb on + strand at 3309.511 kb on - strand, within PfGW456L13_2968 at 3309.513 kb on + strand, within PfGW456L13_2968 at 3309.514 kb on - strand, within PfGW456L13_2968 at 3309.514 kb on - strand, within PfGW456L13_2968 at 3309.537 kb on + strand, within PfGW456L13_2968 at 3309.537 kb on + strand, within PfGW456L13_2968 at 3309.538 kb on - strand, within PfGW456L13_2968 at 3309.538 kb on - strand, within PfGW456L13_2968 at 3309.688 kb on + strand at 3309.688 kb on + strand at 3309.689 kb on - strand at 3309.689 kb on - strand at 3309.689 kb on - strand at 3309.707 kb on + strand at 3309.708 kb on - strand at 3309.732 kb on - strand at 3309.732 kb on - strand at 3309.754 kb on + strand at 3309.765 kb on + strand at 3309.766 kb on - strand at 3309.908 kb on + strand, within PfGW456L13_2969 at 3309.909 kb on - strand, within PfGW456L13_2969 at 3309.909 kb on - strand, within PfGW456L13_2969 at 3309.909 kb on - strand, within PfGW456L13_2969 at 3309.909 kb on - strand, within PfGW456L13_2969 at 3310.031 kb on + strand, within PfGW456L13_2970 at 3310.031 kb on + strand, within PfGW456L13_2970 at 3310.031 kb on + strand, within PfGW456L13_2970 at 3310.031 kb on + strand, within PfGW456L13_2970 at 3310.031 kb on + strand, within PfGW456L13_2970 at 3310.031 kb on + strand, within PfGW456L13_2970 at 3310.031 kb on + strand, within PfGW456L13_2970 at 3310.032 kb on - strand, within PfGW456L13_2970 at 3310.032 kb on - strand, within PfGW456L13_2970 at 3310.116 kb on + strand, within PfGW456L13_2970 at 3310.311 kb on + strand, within PfGW456L13_2970 at 3310.312 kb on - strand, within PfGW456L13_2970 at 3310.312 kb on - strand, within PfGW456L13_2970 at 3310.312 kb on - strand, within PfGW456L13_2970 at 3310.355 kb on + strand at 3310.355 kb on + strand at 3310.355 kb on + strand at 3310.356 kb on - strand at 3310.356 kb on - strand at 3310.356 kb on - strand at 3310.356 kb on - strand at 3310.356 kb on - strand at 3310.405 kb on + strand at 3310.405 kb on + strand at 3310.413 kb on + strand at 3310.413 kb on + strand at 3310.413 kb on + strand at 3310.413 kb on + strand at 3310.413 kb on + strand at 3310.414 kb on - strand at 3310.414 kb on - strand at 3310.419 kb on + strand at 3310.419 kb on + strand at 3310.419 kb on + strand at 3310.419 kb on + strand at 3310.419 kb on + strand at 3310.420 kb on - strand at 3310.508 kb on + strand at 3310.508 kb on + strand at 3310.614 kb on + strand at 3310.614 kb on + strand at 3310.615 kb on - strand at 3310.615 kb on - strand at 3310.629 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 3,308,516 + PfGW456L13_2966 0.15 -0.1 3,308,516 + PfGW456L13_2966 0.15 +0.2 3,308,517 - PfGW456L13_2966 0.15 +0.1 3,308,517 - PfGW456L13_2966 0.15 -0.2 3,308,520 + PfGW456L13_2966 0.15 -0.1 3,308,520 + PfGW456L13_2966 0.15 -0.7 3,308,520 + PfGW456L13_2966 0.15 +0.3 3,308,520 + PfGW456L13_2966 0.15 -0.2 3,308,520 + PfGW456L13_2966 0.15 +0.8 3,308,520 + PfGW456L13_2966 0.15 -0.1 3,308,520 + PfGW456L13_2966 0.15 -0.8 3,308,520 + PfGW456L13_2966 0.15 +0.2 3,308,521 - PfGW456L13_2966 0.15 +0.2 3,308,521 - PfGW456L13_2966 0.15 -0.3 3,308,521 - PfGW456L13_2966 0.15 +0.6 3,308,521 - PfGW456L13_2966 0.15 +0.2 3,308,521 - PfGW456L13_2966 0.15 +1.2 3,308,521 - PfGW456L13_2966 0.15 +0.1 3,308,521 - PfGW456L13_2966 0.15 +0.6 3,308,552 + PfGW456L13_2966 0.18 -0.2 3,308,552 + PfGW456L13_2966 0.18 -0.6 3,308,552 + PfGW456L13_2966 0.18 +0.1 3,308,552 + PfGW456L13_2966 0.18 -0.3 3,308,552 + PfGW456L13_2966 0.18 +0.1 3,308,553 - PfGW456L13_2966 0.19 -0.5 3,308,626 + PfGW456L13_2966 0.26 +1.1 3,308,626 + PfGW456L13_2966 0.26 +0.4 3,308,626 + PfGW456L13_2966 0.26 -1.7 3,308,626 + PfGW456L13_2966 0.26 +0.4 3,308,626 + PfGW456L13_2966 0.26 -0.7 3,308,626 + PfGW456L13_2966 0.26 +1.2 3,308,626 + PfGW456L13_2966 0.26 +0.4 3,308,627 - PfGW456L13_2966 0.27 -0.4 3,308,627 - PfGW456L13_2966 0.27 -0.6 3,308,627 - PfGW456L13_2966 0.27 -0.2 3,308,627 - PfGW456L13_2966 0.27 +1.1 3,308,627 - PfGW456L13_2966 0.27 -0.3 3,308,760 + PfGW456L13_2966 0.41 -0.5 3,308,760 + PfGW456L13_2966 0.41 -0.7 3,308,760 + PfGW456L13_2966 0.41 -1.2 3,308,760 + PfGW456L13_2966 0.41 +0.9 3,308,760 + PfGW456L13_2966 0.41 +0.4 3,308,761 - PfGW456L13_2966 0.41 -0.3 3,308,761 - PfGW456L13_2966 0.41 +2.4 3,308,761 - PfGW456L13_2966 0.41 +0.2 3,308,761 - PfGW456L13_2966 0.41 -0.8 3,308,761 - PfGW456L13_2966 0.41 +0.1 3,308,763 - PfGW456L13_2966 0.41 -1.1 3,308,841 - PfGW456L13_2966 0.50 -1.3 3,308,921 + PfGW456L13_2966 0.58 -0.4 3,309,005 + PfGW456L13_2966 0.67 +1.4 3,309,005 + PfGW456L13_2966 0.67 +0.3 3,309,005 + PfGW456L13_2966 0.67 -0.8 3,309,005 + PfGW456L13_2966 0.67 -0.6 3,309,006 - PfGW456L13_2966 0.67 +1.1 3,309,006 - PfGW456L13_2966 0.67 +0.2 3,309,006 - PfGW456L13_2966 0.67 +1.3 3,309,008 + PfGW456L13_2966 0.68 +0.0 3,309,008 + PfGW456L13_2966 0.68 -1.0 3,309,008 + PfGW456L13_2966 0.68 -0.2 3,309,008 + PfGW456L13_2966 0.68 -0.7 3,309,009 - PfGW456L13_2966 0.68 +0.7 3,309,009 - PfGW456L13_2966 0.68 -0.6 3,309,009 - PfGW456L13_2966 0.68 +0.3 3,309,009 - PfGW456L13_2966 0.68 -1.2 3,309,009 - PfGW456L13_2966 0.68 -0.6 3,309,068 + PfGW456L13_2966 0.74 +0.1 3,309,068 + PfGW456L13_2966 0.74 +0.7 3,309,068 + PfGW456L13_2966 0.74 +0.2 3,309,069 - PfGW456L13_2966 0.74 +0.1 3,309,069 - PfGW456L13_2966 0.74 +0.3 3,309,206 + PfGW456L13_2966 0.89 +0.1 3,309,206 + PfGW456L13_2966 0.89 -1.9 3,309,206 + PfGW456L13_2966 0.89 -0.6 3,309,206 + PfGW456L13_2966 0.89 -0.0 3,309,206 + PfGW456L13_2966 0.89 -0.5 3,309,206 + PfGW456L13_2966 0.89 +1.4 3,309,206 + PfGW456L13_2966 0.89 +0.4 3,309,206 + PfGW456L13_2966 0.89 -0.2 3,309,206 + PfGW456L13_2966 0.89 -0.0 3,309,206 + PfGW456L13_2966 0.89 -0.6 3,309,206 + PfGW456L13_2966 0.89 -1.3 3,309,206 + PfGW456L13_2966 0.89 -0.6 3,309,206 + PfGW456L13_2966 0.89 +0.1 3,309,206 + PfGW456L13_2966 0.89 +0.4 3,309,207 - PfGW456L13_2966 0.89 -0.1 3,309,207 - PfGW456L13_2966 0.89 -0.4 3,309,207 - PfGW456L13_2966 0.89 -1.0 3,309,207 - PfGW456L13_2966 0.89 -0.2 3,309,207 - PfGW456L13_2966 0.89 +0.8 3,309,207 - PfGW456L13_2966 0.89 +0.5 3,309,207 - PfGW456L13_2966 0.89 -0.7 3,309,210 + PfGW456L13_2966 0.89 +0.8 3,309,210 + PfGW456L13_2966 0.89 -0.3 3,309,211 - PfGW456L13_2966 0.89 +0.9 3,309,211 - PfGW456L13_2966 0.89 +0.7 3,309,211 - PfGW456L13_2966 0.89 -0.2 3,309,211 - PfGW456L13_2966 0.89 +1.2 3,309,296 + -0.4 3,309,380 - PfGW456L13_2967 0.33 -0.8 3,309,499 - +0.2 3,309,510 + -0.8 3,309,511 - PfGW456L13_2968 0.10 -0.2 3,309,513 + PfGW456L13_2968 0.12 +1.3 3,309,514 - PfGW456L13_2968 0.12 +0.0 3,309,514 - PfGW456L13_2968 0.12 +0.9 3,309,537 + PfGW456L13_2968 0.29 +0.9 3,309,537 + PfGW456L13_2968 0.29 +1.1 3,309,538 - PfGW456L13_2968 0.30 +0.6 3,309,538 - PfGW456L13_2968 0.30 +0.3 3,309,688 + +2.4 3,309,688 + +0.3 3,309,689 - +1.2 3,309,689 - -0.6 3,309,689 - +0.2 3,309,707 + -0.4 3,309,708 - +0.1 3,309,732 - +1.0 3,309,732 - -0.4 3,309,754 + +0.8 3,309,765 + -0.6 3,309,766 - +0.7 3,309,908 + PfGW456L13_2969 0.62 -1.4 3,309,909 - PfGW456L13_2969 0.62 -0.1 3,309,909 - PfGW456L13_2969 0.62 -1.3 3,309,909 - PfGW456L13_2969 0.62 -0.6 3,309,909 - PfGW456L13_2969 0.62 -0.2 3,310,031 + PfGW456L13_2970 0.12 +0.1 3,310,031 + PfGW456L13_2970 0.12 +1.1 3,310,031 + PfGW456L13_2970 0.12 -0.9 3,310,031 + PfGW456L13_2970 0.12 +0.9 3,310,031 + PfGW456L13_2970 0.12 -0.7 3,310,031 + PfGW456L13_2970 0.12 +0.4 3,310,031 + PfGW456L13_2970 0.12 +0.3 3,310,032 - PfGW456L13_2970 0.12 +0.6 3,310,032 - PfGW456L13_2970 0.12 -0.5 3,310,116 + PfGW456L13_2970 0.34 -0.1 3,310,311 + PfGW456L13_2970 0.87 +0.4 3,310,312 - PfGW456L13_2970 0.87 -0.6 3,310,312 - PfGW456L13_2970 0.87 -0.4 3,310,312 - PfGW456L13_2970 0.87 +1.2 3,310,355 + -0.6 3,310,355 + +0.0 3,310,355 + -0.4 3,310,356 - -0.5 3,310,356 - -0.4 3,310,356 - +0.3 3,310,356 - -0.2 3,310,356 - -0.1 3,310,405 + +0.8 3,310,405 + +0.4 3,310,413 + -0.5 3,310,413 + -0.0 3,310,413 + +0.3 3,310,413 + +0.2 3,310,413 + -0.1 3,310,414 - -0.6 3,310,414 - -2.2 3,310,419 + -0.1 3,310,419 + -0.1 3,310,419 + +1.0 3,310,419 + +1.1 3,310,419 + -2.9 3,310,420 - +0.1 3,310,508 + +0.2 3,310,508 + -0.3 3,310,614 + +0.0 3,310,614 + +0.2 3,310,615 - +2.0 3,310,615 - -0.5 3,310,629 - -0.5
Or see this region's nucleotide sequence