Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2950 and PfGW456L13_2951 overlap by 8 nucleotides PfGW456L13_2951 and PfGW456L13_2952 are separated by 182 nucleotides PfGW456L13_2952 and PfGW456L13_2953 are separated by 243 nucleotides
PfGW456L13_2950 - 2-ketogluconate kinase (EC 2.7.1.13), at 3,291,045 to 3,292,031
_2950
PfGW456L13_2951 - Epimerase KguE, at 3,292,024 to 3,292,806
_2951
PfGW456L13_2952 - 2-ketogluconate utilization repressor PtxS, at 3,292,989 to 3,294,014
_2952
PfGW456L13_2953 - Probable transmembrane protein, at 3,294,258 to 3,294,899
_2953
Position (kb)
3292
3293
3294
3295 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3292.121 kb on + strand, within PfGW456L13_2951 at 3292.138 kb on - strand, within PfGW456L13_2951 at 3292.242 kb on + strand, within PfGW456L13_2951 at 3292.243 kb on - strand, within PfGW456L13_2951 at 3292.254 kb on - strand, within PfGW456L13_2951 at 3292.254 kb on - strand, within PfGW456L13_2951 at 3292.493 kb on + strand, within PfGW456L13_2951 at 3292.610 kb on + strand, within PfGW456L13_2951 at 3292.611 kb on - strand, within PfGW456L13_2951 at 3292.800 kb on + strand at 3292.801 kb on - strand at 3292.801 kb on - strand at 3292.801 kb on - strand at 3292.801 kb on - strand at 3292.801 kb on - strand at 3292.851 kb on + strand at 3292.922 kb on + strand at 3292.922 kb on + strand at 3292.922 kb on + strand at 3292.923 kb on - strand at 3292.923 kb on - strand at 3292.923 kb on - strand at 3292.926 kb on + strand at 3292.926 kb on + strand at 3292.926 kb on + strand at 3292.926 kb on + strand at 3292.926 kb on + strand at 3292.926 kb on + strand at 3292.927 kb on - strand at 3292.927 kb on - strand at 3292.927 kb on - strand at 3292.927 kb on - strand at 3292.937 kb on + strand at 3292.955 kb on - strand at 3292.994 kb on + strand at 3292.995 kb on - strand at 3292.995 kb on - strand at 3293.494 kb on - strand, within PfGW456L13_2952 at 3293.641 kb on + strand, within PfGW456L13_2952 at 3293.642 kb on - strand, within PfGW456L13_2952 at 3293.711 kb on + strand, within PfGW456L13_2952 at 3293.712 kb on - strand, within PfGW456L13_2952 at 3293.765 kb on - strand, within PfGW456L13_2952 at 3294.031 kb on - strand at 3294.039 kb on + strand at 3294.040 kb on - strand at 3294.040 kb on - strand at 3294.040 kb on - strand at 3294.042 kb on - strand at 3294.042 kb on - strand at 3294.214 kb on + strand at 3294.214 kb on + strand at 3294.239 kb on + strand at 3294.239 kb on + strand at 3294.240 kb on - strand at 3294.240 kb on - strand at 3294.281 kb on + strand at 3294.282 kb on - strand at 3294.418 kb on + strand, within PfGW456L13_2953 at 3294.419 kb on - strand, within PfGW456L13_2953 at 3294.433 kb on + strand, within PfGW456L13_2953 at 3294.433 kb on + strand, within PfGW456L13_2953 at 3294.434 kb on - strand, within PfGW456L13_2953 at 3294.434 kb on - strand, within PfGW456L13_2953 at 3294.494 kb on - strand, within PfGW456L13_2953 at 3294.494 kb on - strand, within PfGW456L13_2953 at 3294.766 kb on + strand, within PfGW456L13_2953 at 3294.766 kb on + strand, within PfGW456L13_2953 at 3294.766 kb on + strand, within PfGW456L13_2953 at 3294.766 kb on + strand, within PfGW456L13_2953 at 3294.767 kb on - strand, within PfGW456L13_2953 at 3294.920 kb on + strand at 3294.920 kb on + strand at 3294.921 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 3,292,121 + PfGW456L13_2951 0.12 +0.4 3,292,138 - PfGW456L13_2951 0.15 +0.5 3,292,242 + PfGW456L13_2951 0.28 +0.4 3,292,243 - PfGW456L13_2951 0.28 -0.2 3,292,254 - PfGW456L13_2951 0.29 -0.9 3,292,254 - PfGW456L13_2951 0.29 -0.4 3,292,493 + PfGW456L13_2951 0.60 +0.0 3,292,610 + PfGW456L13_2951 0.75 +0.9 3,292,611 - PfGW456L13_2951 0.75 +0.1 3,292,800 + -0.2 3,292,801 - +0.4 3,292,801 - +2.1 3,292,801 - -0.4 3,292,801 - +0.2 3,292,801 - -0.4 3,292,851 + +1.2 3,292,922 + +0.1 3,292,922 + -1.6 3,292,922 + -0.4 3,292,923 - -0.0 3,292,923 - -1.0 3,292,923 - -0.9 3,292,926 + -0.4 3,292,926 + -0.3 3,292,926 + -1.6 3,292,926 + +0.2 3,292,926 + +0.2 3,292,926 + +0.8 3,292,927 - -0.0 3,292,927 - -1.4 3,292,927 - +0.7 3,292,927 - -2.1 3,292,937 + -2.3 3,292,955 - +1.0 3,292,994 + -0.4 3,292,995 - -0.5 3,292,995 - +0.4 3,293,494 - PfGW456L13_2952 0.49 -0.6 3,293,641 + PfGW456L13_2952 0.64 +0.3 3,293,642 - PfGW456L13_2952 0.64 +0.4 3,293,711 + PfGW456L13_2952 0.70 +0.3 3,293,712 - PfGW456L13_2952 0.70 +2.9 3,293,765 - PfGW456L13_2952 0.76 +0.3 3,294,031 - +0.6 3,294,039 + +0.6 3,294,040 - +1.9 3,294,040 - -1.1 3,294,040 - -0.2 3,294,042 - -0.6 3,294,042 - +1.1 3,294,214 + +0.4 3,294,214 + +0.2 3,294,239 + -0.4 3,294,239 + +0.2 3,294,240 - -0.9 3,294,240 - -1.1 3,294,281 + +0.4 3,294,282 - +1.4 3,294,418 + PfGW456L13_2953 0.25 -0.6 3,294,419 - PfGW456L13_2953 0.25 -0.3 3,294,433 + PfGW456L13_2953 0.27 +0.4 3,294,433 + PfGW456L13_2953 0.27 -1.1 3,294,434 - PfGW456L13_2953 0.27 -0.4 3,294,434 - PfGW456L13_2953 0.27 -0.7 3,294,494 - PfGW456L13_2953 0.37 -0.9 3,294,494 - PfGW456L13_2953 0.37 -0.3 3,294,766 + PfGW456L13_2953 0.79 +0.2 3,294,766 + PfGW456L13_2953 0.79 -0.3 3,294,766 + PfGW456L13_2953 0.79 -0.8 3,294,766 + PfGW456L13_2953 0.79 -2.1 3,294,767 - PfGW456L13_2953 0.79 +0.5 3,294,920 + -0.3 3,294,920 + +0.1 3,294,921 - -0.4
Or see this region's nucleotide sequence