Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2696 and PfGW456L13_2697 are separated by 67 nucleotides PfGW456L13_2697 and PfGW456L13_2698 are separated by 109 nucleotides PfGW456L13_2698 and PfGW456L13_2699 are separated by 47 nucleotides PfGW456L13_2699 and PfGW456L13_2700 are separated by 24 nucleotides PfGW456L13_2700 and PfGW456L13_2701 are separated by 235 nucleotides
PfGW456L13_2696 - Chromosome segregation ATPases, at 2,996,099 to 2,996,761
_2696
PfGW456L13_2697 - hypothetical protein, at 2,996,829 to 2,997,167
_2697
PfGW456L13_2698 - hypothetical protein, at 2,997,277 to 2,997,396
_2698
PfGW456L13_2699 - Exopolyphosphatase (EC 3.6.1.11), at 2,997,444 to 2,998,373
_2699
PfGW456L13_2700 - Arsenate reductase (EC 1.20.4.1), at 2,998,398 to 2,998,841
_2700
PfGW456L13_2701 - Cytochrome c2, at 2,999,077 to 2,999,466
_2701
Position (kb)
2997
2998
2999 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2996.559 kb on - strand, within PfGW456L13_2696 at 2996.576 kb on + strand, within PfGW456L13_2696 at 2996.576 kb on + strand, within PfGW456L13_2696 at 2996.576 kb on + strand, within PfGW456L13_2696 at 2996.576 kb on + strand at 2996.576 kb on + strand, within PfGW456L13_2696 at 2996.576 kb on + strand, within PfGW456L13_2696 at 2996.576 kb on + strand, within PfGW456L13_2696 at 2996.576 kb on + strand, within PfGW456L13_2696 at 2996.759 kb on + strand at 2996.759 kb on + strand at 2996.759 kb on + strand at 2996.813 kb on - strand at 2996.940 kb on + strand, within PfGW456L13_2697 at 2996.940 kb on + strand, within PfGW456L13_2697 at 2996.940 kb on + strand, within PfGW456L13_2697 at 2996.941 kb on - strand, within PfGW456L13_2697 at 2996.941 kb on - strand, within PfGW456L13_2697 at 2997.064 kb on - strand, within PfGW456L13_2697 at 2997.065 kb on + strand, within PfGW456L13_2697 at 2997.096 kb on + strand, within PfGW456L13_2697 at 2997.096 kb on + strand, within PfGW456L13_2697 at 2997.165 kb on + strand at 2997.166 kb on - strand at 2997.166 kb on - strand at 2997.166 kb on - strand at 2997.166 kb on - strand at 2997.166 kb on - strand at 2997.215 kb on + strand at 2997.240 kb on + strand at 2997.240 kb on + strand at 2997.241 kb on - strand at 2997.241 kb on - strand at 2997.960 kb on + strand, within PfGW456L13_2699 at 2997.960 kb on + strand, within PfGW456L13_2699 at 2997.960 kb on + strand, within PfGW456L13_2699 at 2997.961 kb on - strand, within PfGW456L13_2699 at 2997.961 kb on - strand, within PfGW456L13_2699 at 2998.310 kb on + strand at 2998.310 kb on + strand at 2998.310 kb on + strand at 2998.311 kb on - strand at 2998.311 kb on - strand at 2998.311 kb on - strand at 2998.372 kb on - strand at 2998.629 kb on + strand, within PfGW456L13_2700 at 2998.860 kb on + strand at 2998.948 kb on + strand at 2998.948 kb on + strand at 2998.948 kb on + strand at 2998.948 kb on + strand at 2998.948 kb on + strand at 2998.949 kb on - strand at 2998.949 kb on - strand at 2998.949 kb on - strand at 2998.949 kb on - strand at 2998.961 kb on + strand at 2999.043 kb on + strand at 2999.043 kb on + strand at 2999.043 kb on + strand at 2999.047 kb on + strand at 2999.048 kb on - strand at 2999.287 kb on + strand, within PfGW456L13_2701 at 2999.287 kb on + strand, within PfGW456L13_2701 at 2999.287 kb on + strand, within PfGW456L13_2701 at 2999.288 kb on - strand, within PfGW456L13_2701 at 2999.288 kb on - strand, within PfGW456L13_2701 at 2999.288 kb on - strand, within PfGW456L13_2701 at 2999.288 kb on - strand, within PfGW456L13_2701 at 2999.288 kb on - strand, within PfGW456L13_2701 at 2999.288 kb on - strand, within PfGW456L13_2701 at 2999.288 kb on - strand, within PfGW456L13_2701 at 2999.351 kb on - strand, within PfGW456L13_2701
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 2,996,559 - PfGW456L13_2696 0.69 -0.2 2,996,576 + PfGW456L13_2696 0.72 +0.8 2,996,576 + PfGW456L13_2696 0.72 +0.5 2,996,576 + PfGW456L13_2696 0.72 +0.9 2,996,576 + +0.5 2,996,576 + PfGW456L13_2696 0.72 +0.6 2,996,576 + PfGW456L13_2696 0.72 -0.5 2,996,576 + PfGW456L13_2696 0.72 -0.2 2,996,576 + PfGW456L13_2696 0.72 -0.8 2,996,759 + +0.0 2,996,759 + -0.4 2,996,759 + +0.4 2,996,813 - -0.5 2,996,940 + PfGW456L13_2697 0.33 +0.2 2,996,940 + PfGW456L13_2697 0.33 -0.2 2,996,940 + PfGW456L13_2697 0.33 +0.5 2,996,941 - PfGW456L13_2697 0.33 -0.9 2,996,941 - PfGW456L13_2697 0.33 -0.9 2,997,064 - PfGW456L13_2697 0.69 +0.4 2,997,065 + PfGW456L13_2697 0.70 -0.9 2,997,096 + PfGW456L13_2697 0.79 -0.6 2,997,096 + PfGW456L13_2697 0.79 +0.8 2,997,165 + -0.8 2,997,166 - -0.0 2,997,166 - +0.2 2,997,166 - +0.1 2,997,166 - +0.1 2,997,166 - +0.1 2,997,215 + -1.4 2,997,240 + +0.2 2,997,240 + +0.2 2,997,241 - +1.9 2,997,241 - +0.4 2,997,960 + PfGW456L13_2699 0.55 +1.0 2,997,960 + PfGW456L13_2699 0.55 +0.1 2,997,960 + PfGW456L13_2699 0.55 +0.5 2,997,961 - PfGW456L13_2699 0.56 +0.5 2,997,961 - PfGW456L13_2699 0.56 -0.3 2,998,310 + -0.3 2,998,310 + +0.6 2,998,310 + +1.0 2,998,311 - -0.2 2,998,311 - +0.7 2,998,311 - +2.7 2,998,372 - -2.3 2,998,629 + PfGW456L13_2700 0.52 -0.7 2,998,860 + +0.4 2,998,948 + +1.5 2,998,948 + -0.6 2,998,948 + -1.4 2,998,948 + +0.0 2,998,948 + +0.5 2,998,949 - -0.8 2,998,949 - +0.3 2,998,949 - +0.8 2,998,949 - -0.5 2,998,961 + -0.6 2,999,043 + -0.4 2,999,043 + -0.9 2,999,043 + -0.4 2,999,047 + +1.0 2,999,048 - -1.0 2,999,287 + PfGW456L13_2701 0.54 +0.1 2,999,287 + PfGW456L13_2701 0.54 -1.5 2,999,287 + PfGW456L13_2701 0.54 +0.1 2,999,288 - PfGW456L13_2701 0.54 -1.1 2,999,288 - PfGW456L13_2701 0.54 +0.7 2,999,288 - PfGW456L13_2701 0.54 +0.1 2,999,288 - PfGW456L13_2701 0.54 +0.5 2,999,288 - PfGW456L13_2701 0.54 -0.3 2,999,288 - PfGW456L13_2701 0.54 -0.1 2,999,288 - PfGW456L13_2701 0.54 -0.4 2,999,351 - PfGW456L13_2701 0.70 -0.3
Or see this region's nucleotide sequence