Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2681 and PfGW456L13_2682 are separated by 145 nucleotides PfGW456L13_2682 and PfGW456L13_2683 overlap by 4 nucleotides PfGW456L13_2683 and PfGW456L13_2684 are separated by 33 nucleotides
PfGW456L13_2681 - Cytosine/purine/uracil/thiamine/allantoin permease family protein, at 2,979,837 to 2,981,225
_2681
PfGW456L13_2682 - Gll0911 protein, at 2,981,371 to 2,982,090
_2682
PfGW456L13_2683 - D-alanyl-D-alanine dipeptidase (EC 3.4.13.22), at 2,982,087 to 2,982,845
_2683
PfGW456L13_2684 - Lipoate synthase, at 2,982,879 to 2,983,868
_2684
Position (kb)
2981
2982
2983 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2980.483 kb on - strand, within PfGW456L13_2681 at 2980.494 kb on + strand, within PfGW456L13_2681 at 2980.508 kb on - strand, within PfGW456L13_2681 at 2980.508 kb on - strand, within PfGW456L13_2681 at 2980.665 kb on - strand, within PfGW456L13_2681 at 2980.689 kb on + strand, within PfGW456L13_2681 at 2980.690 kb on - strand, within PfGW456L13_2681 at 2980.690 kb on - strand, within PfGW456L13_2681 at 2980.894 kb on - strand, within PfGW456L13_2681 at 2980.894 kb on - strand, within PfGW456L13_2681 at 2980.953 kb on + strand, within PfGW456L13_2681 at 2980.954 kb on - strand, within PfGW456L13_2681 at 2980.954 kb on - strand, within PfGW456L13_2681 at 2980.956 kb on + strand, within PfGW456L13_2681 at 2980.956 kb on + strand, within PfGW456L13_2681 at 2980.956 kb on + strand, within PfGW456L13_2681 at 2980.957 kb on - strand, within PfGW456L13_2681 at 2980.957 kb on - strand, within PfGW456L13_2681 at 2980.957 kb on - strand, within PfGW456L13_2681 at 2980.957 kb on - strand, within PfGW456L13_2681 at 2980.957 kb on - strand, within PfGW456L13_2681 at 2981.046 kb on + strand, within PfGW456L13_2681 at 2981.047 kb on - strand, within PfGW456L13_2681 at 2981.047 kb on - strand, within PfGW456L13_2681 at 2981.047 kb on - strand, within PfGW456L13_2681 at 2981.059 kb on + strand, within PfGW456L13_2681 at 2981.060 kb on - strand, within PfGW456L13_2681 at 2981.060 kb on - strand, within PfGW456L13_2681 at 2981.094 kb on + strand at 2981.094 kb on + strand at 2981.133 kb on - strand at 2981.172 kb on + strand at 2981.172 kb on + strand at 2981.172 kb on + strand at 2981.172 kb on + strand at 2981.173 kb on - strand at 2981.173 kb on - strand at 2981.175 kb on + strand at 2981.286 kb on + strand at 2981.287 kb on - strand at 2981.414 kb on + strand at 2981.415 kb on - strand at 2981.690 kb on + strand, within PfGW456L13_2682 at 2981.691 kb on - strand, within PfGW456L13_2682 at 2981.691 kb on - strand, within PfGW456L13_2682 at 2981.745 kb on - strand, within PfGW456L13_2682 at 2981.774 kb on + strand, within PfGW456L13_2682 at 2981.955 kb on - strand, within PfGW456L13_2682 at 2981.968 kb on - strand, within PfGW456L13_2682 at 2982.149 kb on - strand at 2982.149 kb on - strand at 2982.149 kb on - strand at 2982.149 kb on - strand at 2982.454 kb on + strand, within PfGW456L13_2683 at 2982.454 kb on + strand, within PfGW456L13_2683 at 2982.454 kb on + strand, within PfGW456L13_2683 at 2982.494 kb on - strand, within PfGW456L13_2683 at 2982.494 kb on - strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.757 kb on + strand, within PfGW456L13_2683 at 2982.758 kb on - strand, within PfGW456L13_2683 at 2982.758 kb on - strand, within PfGW456L13_2683 at 2982.758 kb on - strand, within PfGW456L13_2683 at 2982.758 kb on - strand, within PfGW456L13_2683 at 2982.929 kb on - strand at 2983.060 kb on + strand, within PfGW456L13_2684
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 2,980,483 - PfGW456L13_2681 0.47 -0.5 2,980,494 + PfGW456L13_2681 0.47 +1.0 2,980,508 - PfGW456L13_2681 0.48 +0.1 2,980,508 - PfGW456L13_2681 0.48 -0.3 2,980,665 - PfGW456L13_2681 0.60 +0.7 2,980,689 + PfGW456L13_2681 0.61 -0.7 2,980,690 - PfGW456L13_2681 0.61 +0.2 2,980,690 - PfGW456L13_2681 0.61 -1.3 2,980,894 - PfGW456L13_2681 0.76 +0.5 2,980,894 - PfGW456L13_2681 0.76 +0.5 2,980,953 + PfGW456L13_2681 0.80 +0.1 2,980,954 - PfGW456L13_2681 0.80 +0.1 2,980,954 - PfGW456L13_2681 0.80 -0.0 2,980,956 + PfGW456L13_2681 0.81 -0.4 2,980,956 + PfGW456L13_2681 0.81 +1.0 2,980,956 + PfGW456L13_2681 0.81 +0.2 2,980,957 - PfGW456L13_2681 0.81 -0.8 2,980,957 - PfGW456L13_2681 0.81 -2.1 2,980,957 - PfGW456L13_2681 0.81 +3.1 2,980,957 - PfGW456L13_2681 0.81 +0.8 2,980,957 - PfGW456L13_2681 0.81 +0.3 2,981,046 + PfGW456L13_2681 0.87 -0.2 2,981,047 - PfGW456L13_2681 0.87 -0.8 2,981,047 - PfGW456L13_2681 0.87 -0.7 2,981,047 - PfGW456L13_2681 0.87 -1.1 2,981,059 + PfGW456L13_2681 0.88 -0.1 2,981,060 - PfGW456L13_2681 0.88 -0.4 2,981,060 - PfGW456L13_2681 0.88 +0.1 2,981,094 + +0.2 2,981,094 + -1.4 2,981,133 - +0.1 2,981,172 + +0.3 2,981,172 + +0.4 2,981,172 + -0.2 2,981,172 + -0.2 2,981,173 - +1.7 2,981,173 - +0.9 2,981,175 + +1.4 2,981,286 + +0.3 2,981,287 - -0.8 2,981,414 + +0.6 2,981,415 - -0.6 2,981,690 + PfGW456L13_2682 0.44 +0.2 2,981,691 - PfGW456L13_2682 0.44 +0.1 2,981,691 - PfGW456L13_2682 0.44 -0.2 2,981,745 - PfGW456L13_2682 0.52 +1.0 2,981,774 + PfGW456L13_2682 0.56 +1.2 2,981,955 - PfGW456L13_2682 0.81 +0.1 2,981,968 - PfGW456L13_2682 0.83 +0.1 2,982,149 - -0.9 2,982,149 - +0.0 2,982,149 - +0.7 2,982,149 - +0.1 2,982,454 + PfGW456L13_2683 0.48 +0.5 2,982,454 + PfGW456L13_2683 0.48 +0.2 2,982,454 + PfGW456L13_2683 0.48 -0.3 2,982,494 - PfGW456L13_2683 0.54 -0.5 2,982,494 - PfGW456L13_2683 0.54 -0.7 2,982,757 + PfGW456L13_2683 0.88 +0.4 2,982,757 + PfGW456L13_2683 0.88 -0.0 2,982,757 + PfGW456L13_2683 0.88 +0.4 2,982,757 + PfGW456L13_2683 0.88 +0.9 2,982,757 + PfGW456L13_2683 0.88 +0.1 2,982,757 + PfGW456L13_2683 0.88 +0.2 2,982,757 + PfGW456L13_2683 0.88 -0.1 2,982,757 + PfGW456L13_2683 0.88 +1.7 2,982,757 + PfGW456L13_2683 0.88 -0.2 2,982,758 - PfGW456L13_2683 0.88 +0.2 2,982,758 - PfGW456L13_2683 0.88 +0.3 2,982,758 - PfGW456L13_2683 0.88 -0.5 2,982,758 - PfGW456L13_2683 0.88 +0.2 2,982,929 - +0.0 2,983,060 + PfGW456L13_2684 0.18 -1.2
Or see this region's nucleotide sequence