Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2528 and PfGW456L13_2529 are separated by 138 nucleotides PfGW456L13_2529 and PfGW456L13_2530 are separated by 477 nucleotides
PfGW456L13_2528 - Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme, at 2,795,300 to 2,796,484
_2528
PfGW456L13_2529 - Alkanal monooxygenase alpha chain (EC 1.14.14.3), at 2,796,623 to 2,797,744
_2529
PfGW456L13_2530 - 2,3-dihydroxybiphenyl 1,2-dioxygenase, at 2,798,222 to 2,799,118
_2530
Position (kb)
2796
2797
2798 Strain fitness (log2 ratio)
-1
0
1
2
3 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.654 kb on + strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.655 kb on - strand, within PfGW456L13_2528 at 2795.656 kb on + strand, within PfGW456L13_2528 at 2795.657 kb on - strand, within PfGW456L13_2528 at 2795.799 kb on - strand, within PfGW456L13_2528 at 2795.800 kb on + strand, within PfGW456L13_2528 at 2795.801 kb on - strand, within PfGW456L13_2528 at 2796.269 kb on + strand, within PfGW456L13_2528 at 2796.383 kb on - strand at 2796.426 kb on - strand at 2796.426 kb on - strand at 2796.426 kb on - strand at 2796.494 kb on - strand at 2796.494 kb on - strand at 2796.582 kb on - strand at 2796.605 kb on + strand at 2796.605 kb on + strand at 2796.606 kb on - strand at 2796.606 kb on - strand at 2797.034 kb on + strand, within PfGW456L13_2529 at 2797.034 kb on + strand, within PfGW456L13_2529 at 2797.035 kb on - strand, within PfGW456L13_2529 at 2797.148 kb on + strand, within PfGW456L13_2529 at 2797.259 kb on + strand, within PfGW456L13_2529 at 2797.260 kb on - strand, within PfGW456L13_2529 at 2797.260 kb on - strand, within PfGW456L13_2529 at 2797.271 kb on + strand, within PfGW456L13_2529 at 2797.398 kb on - strand, within PfGW456L13_2529 at 2797.398 kb on - strand, within PfGW456L13_2529 at 2797.425 kb on - strand, within PfGW456L13_2529 at 2797.581 kb on - strand, within PfGW456L13_2529 at 2797.745 kb on + strand at 2797.745 kb on + strand at 2797.746 kb on - strand at 2797.746 kb on - strand at 2797.746 kb on - strand at 2797.755 kb on + strand at 2797.783 kb on + strand at 2797.784 kb on - strand at 2797.805 kb on - strand at 2797.877 kb on + strand at 2797.962 kb on + strand at 2798.043 kb on - strand at 2798.156 kb on + strand at 2798.156 kb on + strand at 2798.156 kb on + strand at 2798.157 kb on - strand at 2798.157 kb on - strand at 2798.160 kb on + strand at 2798.160 kb on + strand at 2798.161 kb on - strand at 2798.161 kb on - strand at 2798.161 kb on - strand at 2798.161 kb on - strand at 2798.285 kb on + strand at 2798.342 kb on + strand, within PfGW456L13_2530 at 2798.342 kb on + strand, within PfGW456L13_2530 at 2798.343 kb on - strand, within PfGW456L13_2530 at 2798.661 kb on + strand, within PfGW456L13_2530 at 2798.661 kb on + strand, within PfGW456L13_2530 at 2798.662 kb on - strand, within PfGW456L13_2530 at 2798.662 kb on - strand, within PfGW456L13_2530 at 2798.662 kb on - strand, within PfGW456L13_2530 at 2798.703 kb on - strand, within PfGW456L13_2530 at 2798.703 kb on - strand, within PfGW456L13_2530
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 2,795,654 + PfGW456L13_2528 0.30 -0.5 2,795,654 + PfGW456L13_2528 0.30 -0.2 2,795,654 + PfGW456L13_2528 0.30 -0.4 2,795,654 + PfGW456L13_2528 0.30 +1.7 2,795,654 + PfGW456L13_2528 0.30 +0.9 2,795,654 + PfGW456L13_2528 0.30 -0.1 2,795,654 + PfGW456L13_2528 0.30 +0.3 2,795,654 + PfGW456L13_2528 0.30 -0.6 2,795,654 + PfGW456L13_2528 0.30 -0.4 2,795,654 + PfGW456L13_2528 0.30 -0.2 2,795,654 + PfGW456L13_2528 0.30 -0.6 2,795,654 + PfGW456L13_2528 0.30 -0.4 2,795,654 + PfGW456L13_2528 0.30 -0.6 2,795,654 + PfGW456L13_2528 0.30 -0.3 2,795,655 - PfGW456L13_2528 0.30 +0.2 2,795,655 - PfGW456L13_2528 0.30 +0.1 2,795,655 - PfGW456L13_2528 0.30 +0.4 2,795,655 - PfGW456L13_2528 0.30 -0.8 2,795,655 - PfGW456L13_2528 0.30 +0.0 2,795,656 + PfGW456L13_2528 0.30 -0.4 2,795,657 - PfGW456L13_2528 0.30 +0.8 2,795,799 - PfGW456L13_2528 0.42 +0.4 2,795,800 + PfGW456L13_2528 0.42 -0.2 2,795,801 - PfGW456L13_2528 0.42 +0.5 2,796,269 + PfGW456L13_2528 0.82 -0.9 2,796,383 - +0.5 2,796,426 - +0.6 2,796,426 - -0.1 2,796,426 - +0.3 2,796,494 - +1.3 2,796,494 - -1.6 2,796,582 - -0.1 2,796,605 + +0.5 2,796,605 + +0.3 2,796,606 - +0.1 2,796,606 - -0.4 2,797,034 + PfGW456L13_2529 0.37 +0.5 2,797,034 + PfGW456L13_2529 0.37 -0.8 2,797,035 - PfGW456L13_2529 0.37 +1.3 2,797,148 + PfGW456L13_2529 0.47 +0.4 2,797,259 + PfGW456L13_2529 0.57 +0.5 2,797,260 - PfGW456L13_2529 0.57 +0.1 2,797,260 - PfGW456L13_2529 0.57 +0.6 2,797,271 + PfGW456L13_2529 0.58 -0.3 2,797,398 - PfGW456L13_2529 0.69 +0.3 2,797,398 - PfGW456L13_2529 0.69 +0.6 2,797,425 - PfGW456L13_2529 0.71 -0.1 2,797,581 - PfGW456L13_2529 0.85 +1.7 2,797,745 + +0.1 2,797,745 + -1.2 2,797,746 - +0.3 2,797,746 - +1.1 2,797,746 - -1.1 2,797,755 + -0.1 2,797,783 + -0.4 2,797,784 - +0.3 2,797,805 - -0.8 2,797,877 + +0.5 2,797,962 + +0.4 2,798,043 - -1.0 2,798,156 + +2.9 2,798,156 + -0.4 2,798,156 + -0.4 2,798,157 - +0.7 2,798,157 - +0.4 2,798,160 + +0.3 2,798,160 + -0.3 2,798,161 - +0.6 2,798,161 - +0.2 2,798,161 - +0.3 2,798,161 - -0.7 2,798,285 + +0.5 2,798,342 + PfGW456L13_2530 0.13 -0.9 2,798,342 + PfGW456L13_2530 0.13 +0.1 2,798,343 - PfGW456L13_2530 0.13 -0.7 2,798,661 + PfGW456L13_2530 0.49 -0.3 2,798,661 + PfGW456L13_2530 0.49 -1.5 2,798,662 - PfGW456L13_2530 0.49 -0.4 2,798,662 - PfGW456L13_2530 0.49 +0.4 2,798,662 - PfGW456L13_2530 0.49 -0.7 2,798,703 - PfGW456L13_2530 0.54 -1.1 2,798,703 - PfGW456L13_2530 0.54 -0.3
Or see this region's nucleotide sequence