Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2100 and PfGW456L13_2101 are separated by 105 nucleotides PfGW456L13_2101 and PfGW456L13_2102 are separated by 13 nucleotides PfGW456L13_2102 and PfGW456L13_2103 are separated by 34 nucleotides PfGW456L13_2103 and PfGW456L13_2104 are separated by 179 nucleotides
PfGW456L13_2100 - FIG146278: Maf/YceF/YhdE family protein, at 2,307,171 to 2,307,749
_2100
PfGW456L13_2101 - COG1399 protein, clustered with ribosomal protein L32p, at 2,307,855 to 2,308,382
_2101
PfGW456L13_2102 - LSU ribosomal protein L32p, at 2,308,396 to 2,308,578
_2102
PfGW456L13_2103 - Phosphate:acyl-ACP acyltransferase PlsX, at 2,308,613 to 2,309,593
_2103
PfGW456L13_2104 - Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39), at 2,309,773 to 2,310,657
_2104
Position (kb)
2308
2309
2310 Strain fitness (log2 ratio)
-1
0
1 at 2307.738 kb on + strand at 2307.738 kb on + strand at 2307.761 kb on + strand at 2307.779 kb on + strand at 2307.780 kb on - strand at 2308.576 kb on + strand at 2309.100 kb on + strand, within PfGW456L13_2103 at 2309.207 kb on + strand, within PfGW456L13_2103 at 2309.207 kb on + strand, within PfGW456L13_2103 at 2309.207 kb on + strand, within PfGW456L13_2103 at 2309.207 kb on + strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.208 kb on - strand, within PfGW456L13_2103 at 2309.238 kb on - strand, within PfGW456L13_2103 at 2309.615 kb on + strand at 2309.615 kb on + strand at 2309.615 kb on + strand at 2309.615 kb on + strand at 2309.616 kb on - strand at 2309.616 kb on - strand at 2309.616 kb on - strand at 2309.616 kb on - strand at 2309.705 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 2,307,738 + -0.3 2,307,738 + -0.8 2,307,761 + +0.0 2,307,779 + -0.5 2,307,780 - -1.2 2,308,576 + +0.4 2,309,100 + PfGW456L13_2103 0.50 +0.4 2,309,207 + PfGW456L13_2103 0.61 +1.3 2,309,207 + PfGW456L13_2103 0.61 -1.2 2,309,207 + PfGW456L13_2103 0.61 -0.8 2,309,207 + PfGW456L13_2103 0.61 +0.2 2,309,208 - PfGW456L13_2103 0.61 +0.2 2,309,208 - PfGW456L13_2103 0.61 +1.3 2,309,208 - PfGW456L13_2103 0.61 +0.6 2,309,208 - PfGW456L13_2103 0.61 +0.8 2,309,208 - PfGW456L13_2103 0.61 -0.1 2,309,208 - PfGW456L13_2103 0.61 +1.0 2,309,238 - PfGW456L13_2103 0.64 -0.5 2,309,615 + +0.0 2,309,615 + +0.2 2,309,615 + +0.6 2,309,615 + +0.6 2,309,616 - -0.7 2,309,616 - -1.2 2,309,616 - -0.2 2,309,616 - -0.2 2,309,705 + +0.2
Or see this region's nucleotide sequence