Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1984 and PfGW456L13_1985 are separated by 101 nucleotides PfGW456L13_1985 and PfGW456L13_1986 are separated by 414 nucleotides PfGW456L13_1986 and PfGW456L13_1987 are separated by 23 nucleotides
PfGW456L13_1984 - Mg/Co/Ni transporter MgtE / CBS domain, at 2,189,159 to 2,190,601
_1984
PfGW456L13_1985 - Alginate biosynthesis transcriptional activator, at 2,190,703 to 2,191,029
_1985
PfGW456L13_1986 - hypothetical protein, at 2,191,444 to 2,191,623
_1986
PfGW456L13_1987 - hypothetical protein, at 2,191,647 to 2,191,781
_1987
Position (kb)
2190
2191
2192 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2190.692 kb on + strand at 2190.692 kb on + strand at 2190.692 kb on + strand at 2190.693 kb on - strand at 2190.974 kb on - strand, within PfGW456L13_1985 at 2190.974 kb on - strand, within PfGW456L13_1985 at 2190.974 kb on - strand, within PfGW456L13_1985 at 2190.974 kb on - strand, within PfGW456L13_1985 at 2190.974 kb on - strand, within PfGW456L13_1985 at 2190.993 kb on + strand, within PfGW456L13_1985 at 2191.004 kb on + strand at 2191.005 kb on - strand at 2191.029 kb on + strand at 2191.029 kb on + strand at 2191.035 kb on + strand at 2191.087 kb on + strand at 2191.126 kb on + strand at 2191.127 kb on - strand at 2191.173 kb on + strand at 2191.173 kb on + strand at 2191.173 kb on + strand at 2191.174 kb on - strand at 2191.174 kb on - strand at 2191.174 kb on - strand at 2191.174 kb on - strand at 2191.174 kb on - strand at 2191.185 kb on - strand at 2191.185 kb on - strand at 2191.185 kb on - strand at 2191.220 kb on + strand at 2191.220 kb on + strand at 2191.342 kb on + strand at 2191.342 kb on + strand at 2191.343 kb on - strand at 2191.343 kb on - strand at 2191.343 kb on - strand at 2191.343 kb on - strand at 2191.343 kb on - strand at 2191.383 kb on + strand at 2191.383 kb on + strand at 2191.383 kb on + strand at 2191.384 kb on - strand at 2191.384 kb on - strand at 2191.384 kb on - strand at 2191.513 kb on + strand, within PfGW456L13_1986 at 2191.637 kb on + strand at 2191.653 kb on + strand at 2191.653 kb on + strand at 2191.771 kb on + strand at 2191.781 kb on + strand at 2191.781 kb on + strand at 2191.781 kb on + strand at 2191.781 kb on + strand at 2191.781 kb on + strand at 2191.781 kb on + strand at 2191.781 kb on + strand at 2191.782 kb on - strand at 2191.782 kb on - strand at 2191.782 kb on - strand at 2191.782 kb on - strand at 2191.800 kb on - strand at 2191.834 kb on - strand at 2191.887 kb on + strand at 2191.970 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 2,190,692 + -0.0 2,190,692 + -0.1 2,190,692 + -0.1 2,190,693 - -0.4 2,190,974 - PfGW456L13_1985 0.83 +0.5 2,190,974 - PfGW456L13_1985 0.83 -0.1 2,190,974 - PfGW456L13_1985 0.83 +1.0 2,190,974 - PfGW456L13_1985 0.83 +0.4 2,190,974 - PfGW456L13_1985 0.83 +0.2 2,190,993 + PfGW456L13_1985 0.89 +1.7 2,191,004 + +1.0 2,191,005 - +1.0 2,191,029 + +0.7 2,191,029 + +0.6 2,191,035 + +0.6 2,191,087 + +1.8 2,191,126 + +1.1 2,191,127 - -1.0 2,191,173 + +0.1 2,191,173 + -0.5 2,191,173 + +0.5 2,191,174 - +0.4 2,191,174 - +0.0 2,191,174 - +0.4 2,191,174 - +0.2 2,191,174 - +0.1 2,191,185 - +1.2 2,191,185 - +0.8 2,191,185 - +0.2 2,191,220 + -0.8 2,191,220 + +0.8 2,191,342 + +1.2 2,191,342 + +0.4 2,191,343 - +0.3 2,191,343 - -0.7 2,191,343 - -0.2 2,191,343 - +0.4 2,191,343 - +1.5 2,191,383 + +0.8 2,191,383 + +0.2 2,191,383 + +0.2 2,191,384 - +0.0 2,191,384 - -0.7 2,191,384 - -1.5 2,191,513 + PfGW456L13_1986 0.38 -1.2 2,191,637 + -0.1 2,191,653 + +0.6 2,191,653 + +0.9 2,191,771 + +0.0 2,191,781 + +0.8 2,191,781 + +0.8 2,191,781 + +0.7 2,191,781 + +0.8 2,191,781 + +0.7 2,191,781 + +0.7 2,191,781 + +0.3 2,191,782 - -0.2 2,191,782 - -0.0 2,191,782 - -2.0 2,191,782 - -0.5 2,191,800 - +0.1 2,191,834 - +0.2 2,191,887 + +1.3 2,191,970 + +0.3
Or see this region's nucleotide sequence