Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1868 and PfGW456L13_1869 are separated by 11 nucleotides PfGW456L13_1869 and PfGW456L13_1870 are separated by 432 nucleotides
PfGW456L13_1868 - Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) , at 2,053,835 to 2,056,687
_1868
PfGW456L13_1869 - glycine cleavage system H protein (EC 1.4.1.27) (from data) , at 2,056,699 to 2,057,082
_1869
PfGW456L13_1870 - Sigma-54 dependent transcriptional regulator/sensory box protein, at 2,057,515 to 2,059,023
_1870
Position (kb)
2056
2057
2058 Strain fitness (log2 ratio)
-2
-1
0
1 at 2055.837 kb on + strand, within PfGW456L13_1868 at 2055.837 kb on + strand, within PfGW456L13_1868 at 2055.837 kb on + strand, within PfGW456L13_1868 at 2055.837 kb on + strand, within PfGW456L13_1868 at 2055.838 kb on - strand, within PfGW456L13_1868 at 2055.838 kb on - strand, within PfGW456L13_1868 at 2055.838 kb on - strand, within PfGW456L13_1868 at 2055.838 kb on - strand, within PfGW456L13_1868 at 2055.947 kb on + strand, within PfGW456L13_1868 at 2055.947 kb on + strand, within PfGW456L13_1868 at 2055.947 kb on + strand, within PfGW456L13_1868 at 2055.948 kb on - strand, within PfGW456L13_1868 at 2056.039 kb on - strand, within PfGW456L13_1868 at 2056.067 kb on + strand, within PfGW456L13_1868 at 2056.067 kb on + strand, within PfGW456L13_1868 at 2056.067 kb on + strand, within PfGW456L13_1868 at 2056.136 kb on + strand, within PfGW456L13_1868 at 2056.136 kb on + strand, within PfGW456L13_1868 at 2056.359 kb on + strand, within PfGW456L13_1868 at 2056.359 kb on + strand, within PfGW456L13_1868 at 2056.360 kb on - strand, within PfGW456L13_1868 at 2056.360 kb on - strand, within PfGW456L13_1868 at 2056.360 kb on - strand, within PfGW456L13_1868 at 2056.368 kb on + strand, within PfGW456L13_1868 at 2056.368 kb on + strand, within PfGW456L13_1868 at 2056.369 kb on - strand, within PfGW456L13_1868 at 2056.425 kb on + strand at 2056.428 kb on + strand at 2056.429 kb on - strand at 2056.466 kb on - strand at 2056.666 kb on + strand at 2056.733 kb on + strand at 2056.886 kb on + strand, within PfGW456L13_1869 at 2056.886 kb on + strand, within PfGW456L13_1869 at 2056.886 kb on + strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.887 kb on - strand, within PfGW456L13_1869 at 2056.943 kb on + strand, within PfGW456L13_1869 at 2057.064 kb on + strand at 2057.064 kb on + strand at 2057.065 kb on - strand at 2057.092 kb on + strand at 2057.093 kb on - strand at 2057.093 kb on - strand at 2057.093 kb on - strand at 2057.148 kb on - strand at 2057.158 kb on - strand at 2057.158 kb on - strand at 2057.158 kb on - strand at 2057.161 kb on + strand at 2057.161 kb on + strand at 2057.161 kb on + strand at 2057.161 kb on + strand at 2057.188 kb on + strand at 2057.188 kb on + strand at 2057.262 kb on + strand at 2057.262 kb on + strand at 2057.262 kb on + strand at 2057.262 kb on + strand at 2057.263 kb on - strand at 2057.263 kb on - strand at 2057.263 kb on - strand at 2057.263 kb on - strand at 2057.263 kb on - strand at 2057.264 kb on + strand at 2057.264 kb on + strand at 2057.264 kb on + strand at 2057.264 kb on + strand at 2057.264 kb on + strand at 2057.265 kb on - strand at 2057.265 kb on - strand at 2057.265 kb on - strand at 2057.265 kb on - strand at 2057.275 kb on + strand at 2057.276 kb on - strand at 2057.276 kb on - strand at 2057.436 kb on + strand at 2057.436 kb on + strand at 2057.437 kb on - strand at 2057.461 kb on + strand at 2057.461 kb on + strand at 2057.461 kb on + strand at 2057.461 kb on + strand at 2057.461 kb on + strand at 2057.461 kb on + strand at 2057.461 kb on + strand at 2057.461 kb on + strand at 2057.461 kb on + strand at 2057.462 kb on - strand at 2057.462 kb on - strand at 2057.462 kb on - strand at 2057.462 kb on - strand at 2057.462 kb on - strand at 2057.537 kb on + strand at 2057.537 kb on + strand at 2057.609 kb on + strand at 2057.609 kb on + strand at 2057.618 kb on + strand at 2057.828 kb on + strand, within PfGW456L13_1870 at 2057.891 kb on + strand, within PfGW456L13_1870 at 2057.892 kb on - strand, within PfGW456L13_1870 at 2057.966 kb on + strand, within PfGW456L13_1870 at 2057.966 kb on + strand, within PfGW456L13_1870 at 2057.967 kb on - strand, within PfGW456L13_1870 at 2058.040 kb on + strand, within PfGW456L13_1870 at 2058.040 kb on + strand, within PfGW456L13_1870 at 2058.040 kb on + strand, within PfGW456L13_1870 at 2058.040 kb on + strand, within PfGW456L13_1870 at 2058.041 kb on - strand, within PfGW456L13_1870
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 2,055,837 + PfGW456L13_1868 0.70 +0.4 2,055,837 + PfGW456L13_1868 0.70 -0.1 2,055,837 + PfGW456L13_1868 0.70 +0.2 2,055,837 + PfGW456L13_1868 0.70 -0.7 2,055,838 - PfGW456L13_1868 0.70 -0.5 2,055,838 - PfGW456L13_1868 0.70 +0.3 2,055,838 - PfGW456L13_1868 0.70 -0.7 2,055,838 - PfGW456L13_1868 0.70 +0.7 2,055,947 + PfGW456L13_1868 0.74 +0.2 2,055,947 + PfGW456L13_1868 0.74 -0.6 2,055,947 + PfGW456L13_1868 0.74 +0.9 2,055,948 - PfGW456L13_1868 0.74 -1.0 2,056,039 - PfGW456L13_1868 0.77 +0.0 2,056,067 + PfGW456L13_1868 0.78 +0.7 2,056,067 + PfGW456L13_1868 0.78 +0.4 2,056,067 + PfGW456L13_1868 0.78 -0.6 2,056,136 + PfGW456L13_1868 0.81 +0.3 2,056,136 + PfGW456L13_1868 0.81 +0.4 2,056,359 + PfGW456L13_1868 0.88 -1.3 2,056,359 + PfGW456L13_1868 0.88 -0.4 2,056,360 - PfGW456L13_1868 0.89 +0.1 2,056,360 - PfGW456L13_1868 0.89 -1.4 2,056,360 - PfGW456L13_1868 0.89 +1.2 2,056,368 + PfGW456L13_1868 0.89 -0.2 2,056,368 + PfGW456L13_1868 0.89 -1.3 2,056,369 - PfGW456L13_1868 0.89 +0.9 2,056,425 + -0.3 2,056,428 + +0.5 2,056,429 - +0.6 2,056,466 - -0.5 2,056,666 + -1.6 2,056,733 + -0.4 2,056,886 + PfGW456L13_1869 0.49 -0.8 2,056,886 + PfGW456L13_1869 0.49 +0.0 2,056,886 + PfGW456L13_1869 0.49 -0.2 2,056,887 - PfGW456L13_1869 0.49 +0.1 2,056,887 - PfGW456L13_1869 0.49 -0.9 2,056,887 - PfGW456L13_1869 0.49 +0.5 2,056,887 - PfGW456L13_1869 0.49 -0.3 2,056,887 - PfGW456L13_1869 0.49 +0.8 2,056,887 - PfGW456L13_1869 0.49 +0.3 2,056,887 - PfGW456L13_1869 0.49 +0.3 2,056,887 - PfGW456L13_1869 0.49 +1.4 2,056,887 - PfGW456L13_1869 0.49 +0.4 2,056,943 + PfGW456L13_1869 0.64 -0.5 2,057,064 + +0.4 2,057,064 + -0.1 2,057,065 - -0.2 2,057,092 + -0.8 2,057,093 - -0.4 2,057,093 - -1.1 2,057,093 - -0.0 2,057,148 - -0.0 2,057,158 - +1.3 2,057,158 - +0.0 2,057,158 - +0.7 2,057,161 + -0.4 2,057,161 + -0.3 2,057,161 + -0.4 2,057,161 + -0.6 2,057,188 + +0.6 2,057,188 + -1.4 2,057,262 + +0.2 2,057,262 + +0.3 2,057,262 + -0.3 2,057,262 + -1.9 2,057,263 - -0.7 2,057,263 - +0.3 2,057,263 - +0.7 2,057,263 - +0.4 2,057,263 - +0.1 2,057,264 + -0.1 2,057,264 + +0.5 2,057,264 + +0.4 2,057,264 + +0.4 2,057,264 + +0.0 2,057,265 - -0.8 2,057,265 - +0.3 2,057,265 - -0.3 2,057,265 - +0.6 2,057,275 + +0.1 2,057,276 - +0.7 2,057,276 - -0.0 2,057,436 + -1.5 2,057,436 + +0.1 2,057,437 - +0.3 2,057,461 + -0.5 2,057,461 + +0.7 2,057,461 + +1.2 2,057,461 + +0.4 2,057,461 + +0.9 2,057,461 + +0.3 2,057,461 + -0.2 2,057,461 + +1.1 2,057,461 + +0.7 2,057,462 - -1.0 2,057,462 - +0.7 2,057,462 - -0.2 2,057,462 - +0.8 2,057,462 - -0.1 2,057,537 + -1.0 2,057,537 + +0.2 2,057,609 + -0.3 2,057,609 + +0.2 2,057,618 + -0.5 2,057,828 + PfGW456L13_1870 0.21 -1.3 2,057,891 + PfGW456L13_1870 0.25 +1.1 2,057,892 - PfGW456L13_1870 0.25 -0.3 2,057,966 + PfGW456L13_1870 0.30 -0.1 2,057,966 + PfGW456L13_1870 0.30 -0.7 2,057,967 - PfGW456L13_1870 0.30 +0.3 2,058,040 + PfGW456L13_1870 0.35 +0.3 2,058,040 + PfGW456L13_1870 0.35 -0.1 2,058,040 + PfGW456L13_1870 0.35 +0.1 2,058,040 + PfGW456L13_1870 0.35 -0.5 2,058,041 - PfGW456L13_1870 0.35 -1.1
Or see this region's nucleotide sequence