Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1668 and PfGW456L13_1669 overlap by 11 nucleotides PfGW456L13_1669 and PfGW456L13_1670 are separated by 24 nucleotides
PfGW456L13_1668 - Inner membrane component of tripartite multidrug resistance system, at 1,835,743 to 1,837,935
_1668
PfGW456L13_1669 - Na+-dependent transporters of the SNF family, at 1,837,925 to 1,838,125
_1669
PfGW456L13_1670 - Membrane fusion component of tripartite multidrug resistance system, at 1,838,150 to 1,839,013
_1670
Position (kb)
1837
1838
1839 Strain fitness (log2 ratio)
-1
0
1
2 at 1836.976 kb on + strand, within PfGW456L13_1668 at 1836.976 kb on + strand, within PfGW456L13_1668 at 1836.977 kb on - strand, within PfGW456L13_1668 at 1836.977 kb on - strand, within PfGW456L13_1668 at 1837.228 kb on + strand, within PfGW456L13_1668 at 1837.228 kb on + strand, within PfGW456L13_1668 at 1837.228 kb on + strand, within PfGW456L13_1668 at 1837.229 kb on - strand, within PfGW456L13_1668 at 1837.297 kb on + strand, within PfGW456L13_1668 at 1837.297 kb on + strand, within PfGW456L13_1668 at 1837.297 kb on + strand, within PfGW456L13_1668 at 1837.298 kb on - strand, within PfGW456L13_1668 at 1837.298 kb on - strand, within PfGW456L13_1668 at 1837.306 kb on + strand, within PfGW456L13_1668 at 1837.307 kb on - strand, within PfGW456L13_1668 at 1837.325 kb on - strand, within PfGW456L13_1668 at 1837.325 kb on - strand, within PfGW456L13_1668 at 1837.325 kb on - strand, within PfGW456L13_1668 at 1837.325 kb on - strand, within PfGW456L13_1668 at 1837.325 kb on - strand, within PfGW456L13_1668 at 1837.325 kb on - strand, within PfGW456L13_1668 at 1837.441 kb on + strand, within PfGW456L13_1668 at 1837.441 kb on + strand, within PfGW456L13_1668 at 1837.441 kb on + strand, within PfGW456L13_1668 at 1837.441 kb on + strand, within PfGW456L13_1668 at 1837.441 kb on + strand, within PfGW456L13_1668 at 1837.442 kb on - strand, within PfGW456L13_1668 at 1837.442 kb on - strand, within PfGW456L13_1668 at 1837.574 kb on + strand, within PfGW456L13_1668 at 1837.574 kb on + strand, within PfGW456L13_1668 at 1837.955 kb on + strand, within PfGW456L13_1669 at 1837.955 kb on + strand, within PfGW456L13_1669 at 1837.955 kb on + strand, within PfGW456L13_1669 at 1837.955 kb on + strand, within PfGW456L13_1669 at 1837.955 kb on + strand, within PfGW456L13_1669 at 1837.955 kb on + strand, within PfGW456L13_1669 at 1837.955 kb on + strand, within PfGW456L13_1669 at 1837.956 kb on - strand, within PfGW456L13_1669 at 1838.039 kb on + strand, within PfGW456L13_1669 at 1838.083 kb on + strand, within PfGW456L13_1669 at 1838.083 kb on + strand, within PfGW456L13_1669 at 1838.083 kb on + strand, within PfGW456L13_1669 at 1838.084 kb on - strand, within PfGW456L13_1669 at 1838.084 kb on - strand, within PfGW456L13_1669 at 1838.118 kb on - strand at 1838.131 kb on + strand at 1838.131 kb on + strand at 1838.131 kb on + strand at 1838.132 kb on - strand at 1838.132 kb on - strand at 1838.231 kb on + strand at 1838.231 kb on + strand at 1838.231 kb on + strand at 1838.231 kb on + strand at 1838.231 kb on + strand at 1838.231 kb on + strand at 1838.231 kb on + strand at 1838.231 kb on + strand at 1838.232 kb on - strand at 1838.232 kb on - strand at 1838.232 kb on - strand at 1838.232 kb on - strand at 1838.358 kb on + strand, within PfGW456L13_1670 at 1838.358 kb on + strand, within PfGW456L13_1670 at 1838.359 kb on - strand, within PfGW456L13_1670 at 1838.359 kb on - strand, within PfGW456L13_1670 at 1838.522 kb on - strand, within PfGW456L13_1670 at 1838.628 kb on - strand, within PfGW456L13_1670 at 1838.765 kb on - strand, within PfGW456L13_1670 at 1838.834 kb on + strand, within PfGW456L13_1670 at 1838.834 kb on + strand, within PfGW456L13_1670 at 1838.834 kb on + strand, within PfGW456L13_1670 at 1838.835 kb on - strand, within PfGW456L13_1670 at 1838.835 kb on - strand, within PfGW456L13_1670 at 1838.890 kb on + strand, within PfGW456L13_1670 at 1838.980 kb on + strand at 1838.980 kb on + strand at 1838.980 kb on + strand at 1838.980 kb on + strand at 1838.980 kb on + strand at 1838.980 kb on + strand at 1838.981 kb on - strand at 1838.981 kb on - strand at 1839.026 kb on + strand at 1839.027 kb on - strand at 1839.027 kb on - strand at 1839.027 kb on - strand at 1839.027 kb on - strand at 1839.120 kb on + strand at 1839.121 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 1,836,976 + PfGW456L13_1668 0.56 -0.4 1,836,976 + PfGW456L13_1668 0.56 +0.4 1,836,977 - PfGW456L13_1668 0.56 -0.1 1,836,977 - PfGW456L13_1668 0.56 -1.4 1,837,228 + PfGW456L13_1668 0.68 -0.1 1,837,228 + PfGW456L13_1668 0.68 +0.1 1,837,228 + PfGW456L13_1668 0.68 -0.3 1,837,229 - PfGW456L13_1668 0.68 +0.3 1,837,297 + PfGW456L13_1668 0.71 -1.4 1,837,297 + PfGW456L13_1668 0.71 -0.5 1,837,297 + PfGW456L13_1668 0.71 +1.2 1,837,298 - PfGW456L13_1668 0.71 -0.1 1,837,298 - PfGW456L13_1668 0.71 +0.0 1,837,306 + PfGW456L13_1668 0.71 +0.7 1,837,307 - PfGW456L13_1668 0.71 +0.1 1,837,325 - PfGW456L13_1668 0.72 +0.3 1,837,325 - PfGW456L13_1668 0.72 +0.9 1,837,325 - PfGW456L13_1668 0.72 +0.2 1,837,325 - PfGW456L13_1668 0.72 +1.1 1,837,325 - PfGW456L13_1668 0.72 +0.0 1,837,325 - PfGW456L13_1668 0.72 +0.2 1,837,441 + PfGW456L13_1668 0.77 +0.9 1,837,441 + PfGW456L13_1668 0.77 +0.0 1,837,441 + PfGW456L13_1668 0.77 +0.2 1,837,441 + PfGW456L13_1668 0.77 -0.3 1,837,441 + PfGW456L13_1668 0.77 +0.3 1,837,442 - PfGW456L13_1668 0.77 -0.5 1,837,442 - PfGW456L13_1668 0.77 -0.6 1,837,574 + PfGW456L13_1668 0.83 -0.7 1,837,574 + PfGW456L13_1668 0.83 -0.2 1,837,955 + PfGW456L13_1669 0.15 +1.6 1,837,955 + PfGW456L13_1669 0.15 -0.0 1,837,955 + PfGW456L13_1669 0.15 +0.7 1,837,955 + PfGW456L13_1669 0.15 -0.4 1,837,955 + PfGW456L13_1669 0.15 -0.0 1,837,955 + PfGW456L13_1669 0.15 +0.6 1,837,955 + PfGW456L13_1669 0.15 +1.2 1,837,956 - PfGW456L13_1669 0.15 +1.4 1,838,039 + PfGW456L13_1669 0.57 -0.5 1,838,083 + PfGW456L13_1669 0.79 +1.1 1,838,083 + PfGW456L13_1669 0.79 +0.5 1,838,083 + PfGW456L13_1669 0.79 +0.2 1,838,084 - PfGW456L13_1669 0.79 +1.1 1,838,084 - PfGW456L13_1669 0.79 +0.2 1,838,118 - -0.2 1,838,131 + -0.1 1,838,131 + -1.3 1,838,131 + +0.4 1,838,132 - -1.0 1,838,132 - -1.2 1,838,231 + +0.3 1,838,231 + +0.0 1,838,231 + -0.8 1,838,231 + +0.6 1,838,231 + -0.6 1,838,231 + -0.7 1,838,231 + -0.8 1,838,231 + +0.2 1,838,232 - +0.8 1,838,232 - +1.7 1,838,232 - +0.5 1,838,232 - -0.1 1,838,358 + PfGW456L13_1670 0.24 -0.6 1,838,358 + PfGW456L13_1670 0.24 +0.2 1,838,359 - PfGW456L13_1670 0.24 +0.0 1,838,359 - PfGW456L13_1670 0.24 -0.3 1,838,522 - PfGW456L13_1670 0.43 -0.1 1,838,628 - PfGW456L13_1670 0.55 +2.1 1,838,765 - PfGW456L13_1670 0.71 +0.6 1,838,834 + PfGW456L13_1670 0.79 +0.1 1,838,834 + PfGW456L13_1670 0.79 -0.6 1,838,834 + PfGW456L13_1670 0.79 -0.1 1,838,835 - PfGW456L13_1670 0.79 -0.2 1,838,835 - PfGW456L13_1670 0.79 -0.5 1,838,890 + PfGW456L13_1670 0.86 -0.1 1,838,980 + -0.0 1,838,980 + +0.1 1,838,980 + +0.2 1,838,980 + +0.2 1,838,980 + +0.3 1,838,980 + +0.7 1,838,981 - -0.2 1,838,981 - -0.3 1,839,026 + +0.4 1,839,027 - +0.8 1,839,027 - +0.5 1,839,027 - +1.2 1,839,027 - -0.2 1,839,120 + +0.7 1,839,121 - -1.2
Or see this region's nucleotide sequence