Experiment: Zinc 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1062 and PfGW456L13_1063 are separated by 99 nucleotides PfGW456L13_1063 and PfGW456L13_1064 are separated by 12 nucleotides
PfGW456L13_1062 - Transcriptional regulator, ArsR family / Methyltransferase fusion, at 1,177,216 to 1,178,211
_1062
PfGW456L13_1063 - hypothetical protein, at 1,178,311 to 1,178,550
_1063
PfGW456L13_1064 - Transketolase (EC 2.2.1.1), at 1,178,563 to 1,180,470
_1064
Position (kb)
1178
1179 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1177.408 kb on - strand, within PfGW456L13_1062 at 1177.408 kb on - strand, within PfGW456L13_1062 at 1177.408 kb on - strand, within PfGW456L13_1062 at 1177.408 kb on - strand, within PfGW456L13_1062 at 1177.408 kb on - strand, within PfGW456L13_1062 at 1177.408 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.412 kb on - strand, within PfGW456L13_1062 at 1177.424 kb on - strand, within PfGW456L13_1062 at 1177.424 kb on - strand, within PfGW456L13_1062 at 1177.511 kb on - strand, within PfGW456L13_1062 at 1177.567 kb on - strand, within PfGW456L13_1062 at 1177.573 kb on - strand, within PfGW456L13_1062 at 1177.573 kb on - strand, within PfGW456L13_1062 at 1177.880 kb on - strand, within PfGW456L13_1062 at 1177.880 kb on - strand, within PfGW456L13_1062 at 1177.880 kb on - strand, within PfGW456L13_1062 at 1177.880 kb on - strand, within PfGW456L13_1062 at 1177.880 kb on - strand, within PfGW456L13_1062 at 1177.880 kb on - strand, within PfGW456L13_1062 at 1177.880 kb on - strand, within PfGW456L13_1062 at 1177.880 kb on - strand, within PfGW456L13_1062 at 1178.027 kb on - strand, within PfGW456L13_1062 at 1178.027 kb on - strand, within PfGW456L13_1062 at 1178.204 kb on - strand at 1178.212 kb on - strand at 1178.212 kb on - strand at 1178.226 kb on - strand at 1178.226 kb on - strand at 1178.226 kb on - strand at 1178.243 kb on - strand at 1178.282 kb on + strand at 1178.282 kb on + strand at 1178.302 kb on + strand at 1178.303 kb on - strand at 1178.348 kb on + strand, within PfGW456L13_1063 at 1178.348 kb on + strand, within PfGW456L13_1063 at 1178.349 kb on - strand, within PfGW456L13_1063 at 1178.349 kb on - strand, within PfGW456L13_1063 at 1178.385 kb on + strand, within PfGW456L13_1063 at 1178.385 kb on + strand, within PfGW456L13_1063 at 1178.385 kb on + strand, within PfGW456L13_1063 at 1178.385 kb on + strand, within PfGW456L13_1063 at 1178.385 kb on + strand, within PfGW456L13_1063 at 1178.386 kb on - strand, within PfGW456L13_1063 at 1178.386 kb on - strand, within PfGW456L13_1063 at 1178.386 kb on - strand, within PfGW456L13_1063 at 1178.386 kb on - strand, within PfGW456L13_1063 at 1178.386 kb on - strand, within PfGW456L13_1063 at 1178.448 kb on + strand, within PfGW456L13_1063
Per-strain Table
Position Strand Gene LocusTag Fraction Zinc 1 mM remove 1,177,408 - PfGW456L13_1062 0.19 -0.5 1,177,408 - PfGW456L13_1062 0.19 +0.4 1,177,408 - PfGW456L13_1062 0.19 +0.0 1,177,408 - PfGW456L13_1062 0.19 -1.0 1,177,408 - PfGW456L13_1062 0.19 -0.7 1,177,408 - PfGW456L13_1062 0.19 -0.1 1,177,412 - PfGW456L13_1062 0.20 -0.5 1,177,412 - PfGW456L13_1062 0.20 -0.8 1,177,412 - PfGW456L13_1062 0.20 -0.2 1,177,412 - PfGW456L13_1062 0.20 +0.7 1,177,412 - PfGW456L13_1062 0.20 -1.0 1,177,412 - PfGW456L13_1062 0.20 +0.9 1,177,412 - PfGW456L13_1062 0.20 +1.1 1,177,412 - PfGW456L13_1062 0.20 +0.5 1,177,412 - PfGW456L13_1062 0.20 -0.0 1,177,412 - PfGW456L13_1062 0.20 +0.4 1,177,412 - PfGW456L13_1062 0.20 +1.8 1,177,412 - PfGW456L13_1062 0.20 -0.1 1,177,412 - PfGW456L13_1062 0.20 -0.5 1,177,412 - PfGW456L13_1062 0.20 +0.4 1,177,412 - PfGW456L13_1062 0.20 -0.6 1,177,424 - PfGW456L13_1062 0.21 +0.3 1,177,424 - PfGW456L13_1062 0.21 -0.4 1,177,511 - PfGW456L13_1062 0.30 -0.1 1,177,567 - PfGW456L13_1062 0.35 -0.4 1,177,573 - PfGW456L13_1062 0.36 -0.5 1,177,573 - PfGW456L13_1062 0.36 +0.4 1,177,880 - PfGW456L13_1062 0.67 +0.7 1,177,880 - PfGW456L13_1062 0.67 +0.8 1,177,880 - PfGW456L13_1062 0.67 +0.3 1,177,880 - PfGW456L13_1062 0.67 +0.3 1,177,880 - PfGW456L13_1062 0.67 -0.8 1,177,880 - PfGW456L13_1062 0.67 +0.1 1,177,880 - PfGW456L13_1062 0.67 -0.4 1,177,880 - PfGW456L13_1062 0.67 -0.4 1,178,027 - PfGW456L13_1062 0.81 +0.0 1,178,027 - PfGW456L13_1062 0.81 -0.4 1,178,204 - +0.4 1,178,212 - +3.2 1,178,212 - +1.0 1,178,226 - -1.0 1,178,226 - +0.1 1,178,226 - +0.6 1,178,243 - -0.6 1,178,282 + +0.6 1,178,282 + -0.1 1,178,302 + -0.4 1,178,303 - +0.6 1,178,348 + PfGW456L13_1063 0.15 -0.2 1,178,348 + PfGW456L13_1063 0.15 +0.1 1,178,349 - PfGW456L13_1063 0.16 -1.5 1,178,349 - PfGW456L13_1063 0.16 +0.0 1,178,385 + PfGW456L13_1063 0.31 +1.1 1,178,385 + PfGW456L13_1063 0.31 +1.5 1,178,385 + PfGW456L13_1063 0.31 +0.5 1,178,385 + PfGW456L13_1063 0.31 -0.1 1,178,385 + PfGW456L13_1063 0.31 +0.1 1,178,386 - PfGW456L13_1063 0.31 +0.9 1,178,386 - PfGW456L13_1063 0.31 -0.1 1,178,386 - PfGW456L13_1063 0.31 +1.2 1,178,386 - PfGW456L13_1063 0.31 +2.2 1,178,386 - PfGW456L13_1063 0.31 +0.3 1,178,448 + PfGW456L13_1063 0.57 +1.0
Or see this region's nucleotide sequence