Strain Fitness in Pseudomonas sp. S08-1 around OH686_23850

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_23845 and OH686_23850 overlap by 4 nucleotidesOH686_23850 and OH686_23855 are separated by 11 nucleotidesOH686_23855 and OH686_23860 are separated by 15 nucleotides OH686_23845: OH686_23845 - Uncharacterized MFS-type transporter, at 4,830,886 to 4,832,112 _23845 OH686_23850: OH686_23850 - hypothetical protein, at 4,832,109 to 4,832,462 _23850 OH686_23855: OH686_23855 - Alpha-ketoglutarate-dependent taurine dioxygenase , at 4,832,474 to 4,833,307 _23855 OH686_23860: OH686_23860 - Taurine ABC transporter, permease protein TauC, at 4,833,323 to 4,834,156 _23860 Position (kb) 4832 4833Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4831.204 kb on + strand, within OH686_23845at 4831.204 kb on + strand, within OH686_23845at 4831.204 kb on + strand, within OH686_23845at 4831.205 kb on - strand, within OH686_23845at 4831.205 kb on - strand, within OH686_23845at 4831.205 kb on - strand, within OH686_23845at 4831.205 kb on - strand, within OH686_23845at 4831.222 kb on + strand, within OH686_23845at 4831.222 kb on + strand, within OH686_23845at 4831.372 kb on + strand, within OH686_23845at 4831.372 kb on + strand, within OH686_23845at 4831.372 kb on + strand, within OH686_23845at 4831.372 kb on + strand, within OH686_23845at 4831.373 kb on - strand, within OH686_23845at 4831.373 kb on - strand, within OH686_23845at 4831.373 kb on - strand, within OH686_23845at 4831.399 kb on + strand, within OH686_23845at 4831.399 kb on + strand, within OH686_23845at 4831.399 kb on + strand, within OH686_23845at 4831.399 kb on + strand, within OH686_23845at 4831.399 kb on + strand, within OH686_23845at 4831.400 kb on - strand, within OH686_23845at 4831.400 kb on - strand, within OH686_23845at 4831.400 kb on - strand, within OH686_23845at 4831.400 kb on - strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.615 kb on + strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.616 kb on - strand, within OH686_23845at 4831.666 kb on - strand, within OH686_23845at 4831.666 kb on - strand, within OH686_23845at 4831.702 kb on + strand, within OH686_23845at 4831.702 kb on + strand, within OH686_23845at 4831.702 kb on + strand, within OH686_23845at 4831.702 kb on + strand, within OH686_23845at 4831.702 kb on + strand, within OH686_23845at 4831.703 kb on - strand, within OH686_23845at 4831.703 kb on - strand, within OH686_23845at 4831.703 kb on - strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.861 kb on + strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.862 kb on - strand, within OH686_23845at 4831.863 kb on + strand, within OH686_23845at 4831.863 kb on + strand, within OH686_23845at 4831.864 kb on - strand, within OH686_23845at 4831.864 kb on - strand, within OH686_23845at 4832.110 kb on + strandat 4832.110 kb on + strandat 4832.168 kb on - strand, within OH686_23850at 4832.224 kb on + strand, within OH686_23850at 4832.224 kb on + strand, within OH686_23850at 4832.225 kb on - strand, within OH686_23850at 4832.225 kb on - strand, within OH686_23850at 4832.225 kb on - strand, within OH686_23850at 4832.292 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.310 kb on + strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.311 kb on - strand, within OH686_23850at 4832.312 kb on + strand, within OH686_23850at 4832.312 kb on + strand, within OH686_23850at 4832.313 kb on - strand, within OH686_23850at 4832.313 kb on - strand, within OH686_23850at 4832.313 kb on - strand, within OH686_23850at 4832.326 kb on + strand, within OH686_23850at 4832.326 kb on + strand, within OH686_23850at 4832.327 kb on - strand, within OH686_23850at 4832.327 kb on - strand, within OH686_23850at 4832.327 kb on - strand, within OH686_23850at 4832.477 kb on + strandat 4832.477 kb on + strandat 4832.478 kb on - strandat 4832.478 kb on - strandat 4832.547 kb on + strandat 4832.547 kb on + strandat 4832.547 kb on + strandat 4832.547 kb on + strandat 4832.547 kb on + strandat 4832.548 kb on - strandat 4832.548 kb on - strandat 4832.548 kb on - strandat 4832.548 kb on - strandat 4832.581 kb on + strand, within OH686_23855at 4832.582 kb on - strand, within OH686_23855at 4832.582 kb on - strand, within OH686_23855at 4832.939 kb on - strand, within OH686_23855at 4832.949 kb on + strand, within OH686_23855at 4833.097 kb on - strand, within OH686_23855at 4833.097 kb on - strand, within OH686_23855at 4833.295 kb on + strandat 4833.295 kb on + strandat 4833.295 kb on + strandat 4833.295 kb on + strandat 4833.295 kb on + strandat 4833.296 kb on - strandat 4833.296 kb on - strandat 4833.296 kb on - strandat 4833.313 kb on + strandat 4833.313 kb on + strandat 4833.313 kb on + strandat 4833.313 kb on + strandat 4833.314 kb on - strandat 4833.314 kb on - strandat 4833.314 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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4,831,204 + OH686_23845 0.26 -0.5
4,831,204 + OH686_23845 0.26 -0.0
4,831,204 + OH686_23845 0.26 +1.7
4,831,205 - OH686_23845 0.26 -1.2
4,831,205 - OH686_23845 0.26 -3.4
4,831,205 - OH686_23845 0.26 +0.5
4,831,205 - OH686_23845 0.26 -0.6
4,831,222 + OH686_23845 0.27 -0.4
4,831,222 + OH686_23845 0.27 -0.6
4,831,372 + OH686_23845 0.40 -0.0
4,831,372 + OH686_23845 0.40 -0.3
4,831,372 + OH686_23845 0.40 -0.8
4,831,372 + OH686_23845 0.40 +0.6
4,831,373 - OH686_23845 0.40 -0.4
4,831,373 - OH686_23845 0.40 -1.5
4,831,373 - OH686_23845 0.40 -0.5
4,831,399 + OH686_23845 0.42 -1.1
4,831,399 + OH686_23845 0.42 -1.3
4,831,399 + OH686_23845 0.42 +0.4
4,831,399 + OH686_23845 0.42 -0.0
4,831,399 + OH686_23845 0.42 +0.7
4,831,400 - OH686_23845 0.42 -0.3
4,831,400 - OH686_23845 0.42 -0.9
4,831,400 - OH686_23845 0.42 +0.2
4,831,400 - OH686_23845 0.42 -0.0
4,831,615 + OH686_23845 0.59 -1.3
4,831,615 + OH686_23845 0.59 -0.6
4,831,615 + OH686_23845 0.59 -0.1
4,831,615 + OH686_23845 0.59 -0.5
4,831,615 + OH686_23845 0.59 -0.6
4,831,615 + OH686_23845 0.59 -1.3
4,831,615 + OH686_23845 0.59 -0.1
4,831,615 + OH686_23845 0.59 +0.2
4,831,615 + OH686_23845 0.59 -0.2
4,831,615 + OH686_23845 0.59 +0.6
4,831,616 - OH686_23845 0.59 +0.1
4,831,616 - OH686_23845 0.59 -0.6
4,831,616 - OH686_23845 0.59 -0.7
4,831,616 - OH686_23845 0.59 +0.3
4,831,616 - OH686_23845 0.59 +0.4
4,831,616 - OH686_23845 0.59 +0.3
4,831,616 - OH686_23845 0.59 -0.9
4,831,616 - OH686_23845 0.59 -1.3
4,831,616 - OH686_23845 0.59 -0.0
4,831,616 - OH686_23845 0.59 -0.9
4,831,616 - OH686_23845 0.59 +0.2
4,831,616 - OH686_23845 0.59 -0.8
4,831,616 - OH686_23845 0.59 +0.5
4,831,666 - OH686_23845 0.64 +1.0
4,831,666 - OH686_23845 0.64 +0.3
4,831,702 + OH686_23845 0.67 +1.7
4,831,702 + OH686_23845 0.67 -0.4
4,831,702 + OH686_23845 0.67 -0.5
4,831,702 + OH686_23845 0.67 +1.2
4,831,702 + OH686_23845 0.67 -0.4
4,831,703 - OH686_23845 0.67 +0.3
4,831,703 - OH686_23845 0.67 +0.9
4,831,703 - OH686_23845 0.67 -0.7
4,831,861 + OH686_23845 0.79 -1.1
4,831,861 + OH686_23845 0.79 -0.3
4,831,861 + OH686_23845 0.79 -1.1
4,831,861 + OH686_23845 0.79 -1.4
4,831,861 + OH686_23845 0.79 -0.7
4,831,861 + OH686_23845 0.79 -0.5
4,831,861 + OH686_23845 0.79 -0.0
4,831,861 + OH686_23845 0.79 -0.3
4,831,861 + OH686_23845 0.79 +0.1
4,831,861 + OH686_23845 0.79 -1.4
4,831,861 + OH686_23845 0.79 -1.4
4,831,861 + OH686_23845 0.79 -0.3
4,831,861 + OH686_23845 0.79 -0.2
4,831,861 + OH686_23845 0.79 -1.6
4,831,861 + OH686_23845 0.79 -0.3
4,831,861 + OH686_23845 0.79 -1.4
4,831,861 + OH686_23845 0.79 -1.0
4,831,861 + OH686_23845 0.79 +0.3
4,831,861 + OH686_23845 0.79 -0.9
4,831,861 + OH686_23845 0.79 -0.4
4,831,861 + OH686_23845 0.79 -1.7
4,831,861 + OH686_23845 0.79 +0.6
4,831,861 + OH686_23845 0.79 -0.5
4,831,861 + OH686_23845 0.79 +0.2
4,831,861 + OH686_23845 0.79 +0.6
4,831,861 + OH686_23845 0.79 +0.2
4,831,861 + OH686_23845 0.79 +0.5
4,831,861 + OH686_23845 0.79 +1.2
4,831,861 + OH686_23845 0.79 -0.1
4,831,861 + OH686_23845 0.79 -2.4
4,831,861 + OH686_23845 0.79 -0.3
4,831,861 + OH686_23845 0.79 -1.4
4,831,861 + OH686_23845 0.79 -1.6
4,831,862 - OH686_23845 0.80 -1.0
4,831,862 - OH686_23845 0.80 -0.6
4,831,862 - OH686_23845 0.80 -0.2
4,831,862 - OH686_23845 0.80 -1.9
4,831,862 - OH686_23845 0.80 +0.1
4,831,862 - OH686_23845 0.80 -0.9
4,831,862 - OH686_23845 0.80 +0.1
4,831,862 - OH686_23845 0.80 +0.8
4,831,862 - OH686_23845 0.80 -0.7
4,831,862 - OH686_23845 0.80 -0.2
4,831,862 - OH686_23845 0.80 +0.0
4,831,862 - OH686_23845 0.80 -0.3
4,831,862 - OH686_23845 0.80 -1.6
4,831,862 - OH686_23845 0.80 -0.3
4,831,862 - OH686_23845 0.80 -0.0
4,831,862 - OH686_23845 0.80 +0.7
4,831,862 - OH686_23845 0.80 -3.4
4,831,862 - OH686_23845 0.80 -0.8
4,831,862 - OH686_23845 0.80 -1.0
4,831,862 - OH686_23845 0.80 -2.1
4,831,862 - OH686_23845 0.80 -0.5
4,831,862 - OH686_23845 0.80 +1.2
4,831,862 - OH686_23845 0.80 -1.0
4,831,862 - OH686_23845 0.80 -0.2
4,831,862 - OH686_23845 0.80 +0.6
4,831,862 - OH686_23845 0.80 +0.2
4,831,862 - OH686_23845 0.80 +0.3
4,831,862 - OH686_23845 0.80 -1.2
4,831,862 - OH686_23845 0.80 -0.3
4,831,862 - OH686_23845 0.80 -0.7
4,831,862 - OH686_23845 0.80 -1.0
4,831,862 - OH686_23845 0.80 -0.4
4,831,862 - OH686_23845 0.80 -0.9
4,831,862 - OH686_23845 0.80 +0.7
4,831,862 - OH686_23845 0.80 -0.2
4,831,862 - OH686_23845 0.80 -0.7
4,831,862 - OH686_23845 0.80 +0.6
4,831,862 - OH686_23845 0.80 -1.4
4,831,862 - OH686_23845 0.80 +0.8
4,831,862 - OH686_23845 0.80 -0.4
4,831,862 - OH686_23845 0.80 +0.2
4,831,862 - OH686_23845 0.80 -1.3
4,831,863 + OH686_23845 0.80 -0.0
4,831,863 + OH686_23845 0.80 +1.4
4,831,864 - OH686_23845 0.80 +0.1
4,831,864 - OH686_23845 0.80 +0.3
4,832,110 + +1.0
4,832,110 + -0.0
4,832,168 - OH686_23850 0.17 +0.3
4,832,224 + OH686_23850 0.32 -0.5
4,832,224 + OH686_23850 0.32 +0.0
4,832,225 - OH686_23850 0.33 +2.4
4,832,225 - OH686_23850 0.33 +0.0
4,832,225 - OH686_23850 0.33 -1.4
4,832,292 + OH686_23850 0.52 -1.7
4,832,310 + OH686_23850 0.57 -0.2
4,832,310 + OH686_23850 0.57 -0.5
4,832,310 + OH686_23850 0.57 +0.5
4,832,310 + OH686_23850 0.57 -0.4
4,832,310 + OH686_23850 0.57 -1.6
4,832,310 + OH686_23850 0.57 -0.0
4,832,310 + OH686_23850 0.57 -0.7
4,832,310 + OH686_23850 0.57 -1.9
4,832,310 + OH686_23850 0.57 -0.6
4,832,310 + OH686_23850 0.57 -0.4
4,832,310 + OH686_23850 0.57 +0.4
4,832,310 + OH686_23850 0.57 -0.8
4,832,310 + OH686_23850 0.57 +0.2
4,832,310 + OH686_23850 0.57 -0.3
4,832,311 - OH686_23850 0.57 -2.2
4,832,311 - OH686_23850 0.57 -0.2
4,832,311 - OH686_23850 0.57 -0.9
4,832,311 - OH686_23850 0.57 +0.2
4,832,311 - OH686_23850 0.57 -0.5
4,832,311 - OH686_23850 0.57 -0.3
4,832,311 - OH686_23850 0.57 -0.5
4,832,311 - OH686_23850 0.57 -0.2
4,832,311 - OH686_23850 0.57 +0.3
4,832,311 - OH686_23850 0.57 +0.0
4,832,311 - OH686_23850 0.57 -0.1
4,832,311 - OH686_23850 0.57 +0.1
4,832,311 - OH686_23850 0.57 -1.9
4,832,311 - OH686_23850 0.57 +0.2
4,832,311 - OH686_23850 0.57 -0.2
4,832,311 - OH686_23850 0.57 +0.3
4,832,311 - OH686_23850 0.57 -0.2
4,832,311 - OH686_23850 0.57 +0.1
4,832,311 - OH686_23850 0.57 +0.2
4,832,312 + OH686_23850 0.57 -0.5
4,832,312 + OH686_23850 0.57 -0.0
4,832,313 - OH686_23850 0.58 -0.5
4,832,313 - OH686_23850 0.58 -0.0
4,832,313 - OH686_23850 0.58 -0.8
4,832,326 + OH686_23850 0.61 -1.0
4,832,326 + OH686_23850 0.61 +0.9
4,832,327 - OH686_23850 0.62 -0.2
4,832,327 - OH686_23850 0.62 -3.7
4,832,327 - OH686_23850 0.62 +0.2
4,832,477 + +0.1
4,832,477 + -0.4
4,832,478 - -0.5
4,832,478 - -0.2
4,832,547 + +0.3
4,832,547 + -0.4
4,832,547 + -0.0
4,832,547 + +0.4
4,832,547 + +0.2
4,832,548 - +0.2
4,832,548 - +2.0
4,832,548 - -0.2
4,832,548 - +0.0
4,832,581 + OH686_23855 0.13 -0.1
4,832,582 - OH686_23855 0.13 +0.6
4,832,582 - OH686_23855 0.13 -0.4
4,832,939 - OH686_23855 0.56 +0.8
4,832,949 + OH686_23855 0.57 -1.0
4,833,097 - OH686_23855 0.75 -0.9
4,833,097 - OH686_23855 0.75 -0.5
4,833,295 + -0.1
4,833,295 + +0.4
4,833,295 + +0.4
4,833,295 + -2.6
4,833,295 + -1.3
4,833,296 - -1.4
4,833,296 - +0.8
4,833,296 - +0.7
4,833,313 + +1.4
4,833,313 + -2.2
4,833,313 + +0.8
4,833,313 + +0.5
4,833,314 - +0.0
4,833,314 - -0.3
4,833,314 - +0.2

Or see this region's nucleotide sequence