Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_17730 and OH686_17735 are separated by 28 nucleotides OH686_17735 and OH686_17740 are separated by 40 nucleotides OH686_17740 and OH686_17745 are separated by 162 nucleotides OH686_17745 and OH686_17750 are separated by 106 nucleotides
OH686_17730: OH686_17730 - 16S rRNA processing protein RimM, at 3,698,867 to 3,699,400
_17730
OH686_17735: OH686_17735 - tRNA (guanine(37)-N(1))-methyltransferase, at 3,699,429 to 3,700,172
_17735
OH686_17740: OH686_17740 - ribosomal protein L19, at 3,700,213 to 3,700,563
_17740
OH686_17745: OH686_17745 - Acyl-CoA hydrolase , at 3,700,726 to 3,701,136
_17745
OH686_17750: OH686_17750 - tyrosine recombinase XerD, at 3,701,243 to 3,702,139
_17750
Position (kb)
3700
3701 Strain fitness (log2 ratio)
-2
-1
0
1 at 3700.166 kb on + strand at 3700.166 kb on + strand at 3700.166 kb on + strand at 3700.170 kb on + strand at 3700.170 kb on + strand at 3700.170 kb on + strand at 3700.170 kb on + strand at 3700.170 kb on + strand at 3700.170 kb on + strand at 3700.170 kb on + strand at 3700.170 kb on + strand at 3700.175 kb on + strand at 3700.175 kb on + strand at 3700.175 kb on + strand at 3700.175 kb on + strand at 3700.175 kb on + strand at 3700.201 kb on + strand at 3700.201 kb on + strand at 3700.507 kb on + strand, within OH686_17740 at 3700.507 kb on + strand, within OH686_17740 at 3700.507 kb on + strand, within OH686_17740 at 3700.507 kb on + strand, within OH686_17740 at 3700.507 kb on + strand, within OH686_17740 at 3700.507 kb on + strand, within OH686_17740 at 3700.510 kb on + strand, within OH686_17740 at 3700.511 kb on - strand, within OH686_17740 at 3700.719 kb on + strand at 3700.719 kb on + strand at 3700.719 kb on + strand at 3700.719 kb on + strand at 3700.719 kb on + strand at 3700.719 kb on + strand at 3700.720 kb on - strand at 3700.720 kb on - strand at 3700.807 kb on - strand, within OH686_17745 at 3701.021 kb on + strand, within OH686_17745 at 3701.021 kb on + strand, within OH686_17745 at 3701.021 kb on + strand, within OH686_17745 at 3701.022 kb on - strand, within OH686_17745 at 3701.022 kb on - strand, within OH686_17745 at 3701.022 kb on - strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.038 kb on + strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.039 kb on - strand, within OH686_17745 at 3701.197 kb on + strand at 3701.330 kb on + strand at 3701.343 kb on + strand, within OH686_17750 at 3701.343 kb on + strand, within OH686_17750 at 3701.343 kb on + strand, within OH686_17750 at 3701.343 kb on + strand, within OH686_17750 at 3701.343 kb on + strand, within OH686_17750 at 3701.343 kb on + strand, within OH686_17750 at 3701.343 kb on + strand, within OH686_17750 at 3701.343 kb on + strand, within OH686_17750 at 3701.344 kb on - strand, within OH686_17750 at 3701.344 kb on - strand, within OH686_17750 at 3701.344 kb on - strand, within OH686_17750 at 3701.344 kb on - strand, within OH686_17750 at 3701.344 kb on - strand, within OH686_17750 at 3701.344 kb on - strand, within OH686_17750 at 3701.444 kb on + strand, within OH686_17750 at 3701.444 kb on + strand, within OH686_17750 at 3701.444 kb on + strand, within OH686_17750 at 3701.444 kb on + strand, within OH686_17750 at 3701.444 kb on + strand, within OH686_17750 at 3701.444 kb on + strand, within OH686_17750 at 3701.444 kb on + strand, within OH686_17750 at 3701.445 kb on - strand, within OH686_17750 at 3701.445 kb on - strand, within OH686_17750 at 3701.445 kb on - strand, within OH686_17750 at 3701.445 kb on - strand, within OH686_17750 at 3701.445 kb on - strand, within OH686_17750 at 3701.445 kb on - strand, within OH686_17750 at 3701.492 kb on + strand, within OH686_17750 at 3701.492 kb on + strand, within OH686_17750 at 3701.493 kb on - strand, within OH686_17750 at 3701.493 kb on - strand, within OH686_17750 at 3701.498 kb on + strand, within OH686_17750 at 3701.498 kb on + strand, within OH686_17750 at 3701.499 kb on - strand, within OH686_17750 at 3701.499 kb on - strand, within OH686_17750
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,700,166 + +0.7 3,700,166 + -0.2 3,700,166 + +1.1 3,700,170 + +0.1 3,700,170 + +0.3 3,700,170 + +0.3 3,700,170 + +1.0 3,700,170 + +1.4 3,700,170 + +1.6 3,700,170 + -0.5 3,700,170 + -1.7 3,700,175 + +0.3 3,700,175 + +0.2 3,700,175 + +0.3 3,700,175 + -0.6 3,700,175 + +1.0 3,700,201 + +0.5 3,700,201 + +0.1 3,700,507 + OH686_17740 0.84 -1.2 3,700,507 + OH686_17740 0.84 -1.2 3,700,507 + OH686_17740 0.84 +0.6 3,700,507 + OH686_17740 0.84 -0.4 3,700,507 + OH686_17740 0.84 -0.6 3,700,507 + OH686_17740 0.84 +1.0 3,700,510 + OH686_17740 0.85 -0.6 3,700,511 - OH686_17740 0.85 -0.4 3,700,719 + +0.1 3,700,719 + -0.1 3,700,719 + -0.6 3,700,719 + -0.8 3,700,719 + -0.9 3,700,719 + -0.0 3,700,720 - +0.7 3,700,720 - +0.3 3,700,807 - OH686_17745 0.20 -0.5 3,701,021 + OH686_17745 0.72 -0.3 3,701,021 + OH686_17745 0.72 -0.9 3,701,021 + OH686_17745 0.72 +1.1 3,701,022 - OH686_17745 0.72 -1.0 3,701,022 - OH686_17745 0.72 +0.0 3,701,022 - OH686_17745 0.72 +0.2 3,701,038 + OH686_17745 0.76 -1.5 3,701,038 + OH686_17745 0.76 +0.4 3,701,038 + OH686_17745 0.76 +0.1 3,701,038 + OH686_17745 0.76 -0.9 3,701,038 + OH686_17745 0.76 -0.1 3,701,038 + OH686_17745 0.76 -0.4 3,701,038 + OH686_17745 0.76 +0.3 3,701,038 + OH686_17745 0.76 -0.5 3,701,038 + OH686_17745 0.76 -0.6 3,701,038 + OH686_17745 0.76 -0.7 3,701,038 + OH686_17745 0.76 -0.2 3,701,039 - OH686_17745 0.76 +0.1 3,701,039 - OH686_17745 0.76 -1.8 3,701,039 - OH686_17745 0.76 +0.6 3,701,039 - OH686_17745 0.76 -0.2 3,701,039 - OH686_17745 0.76 +0.5 3,701,039 - OH686_17745 0.76 +0.1 3,701,039 - OH686_17745 0.76 -0.4 3,701,039 - OH686_17745 0.76 -0.1 3,701,039 - OH686_17745 0.76 +0.3 3,701,039 - OH686_17745 0.76 +0.4 3,701,039 - OH686_17745 0.76 -0.4 3,701,197 + +0.3 3,701,330 + -1.3 3,701,343 + OH686_17750 0.11 -0.4 3,701,343 + OH686_17750 0.11 -1.5 3,701,343 + OH686_17750 0.11 +0.1 3,701,343 + OH686_17750 0.11 -0.9 3,701,343 + OH686_17750 0.11 -0.6 3,701,343 + OH686_17750 0.11 -1.7 3,701,343 + OH686_17750 0.11 -0.6 3,701,343 + OH686_17750 0.11 +0.1 3,701,344 - OH686_17750 0.11 -0.4 3,701,344 - OH686_17750 0.11 +1.6 3,701,344 - OH686_17750 0.11 -2.6 3,701,344 - OH686_17750 0.11 +0.4 3,701,344 - OH686_17750 0.11 -0.8 3,701,344 - OH686_17750 0.11 -0.5 3,701,444 + OH686_17750 0.22 -0.0 3,701,444 + OH686_17750 0.22 -1.3 3,701,444 + OH686_17750 0.22 +0.5 3,701,444 + OH686_17750 0.22 +0.3 3,701,444 + OH686_17750 0.22 -0.4 3,701,444 + OH686_17750 0.22 -1.5 3,701,444 + OH686_17750 0.22 +0.6 3,701,445 - OH686_17750 0.23 -0.4 3,701,445 - OH686_17750 0.23 -2.2 3,701,445 - OH686_17750 0.23 +1.5 3,701,445 - OH686_17750 0.23 -1.0 3,701,445 - OH686_17750 0.23 +0.8 3,701,445 - OH686_17750 0.23 -0.4 3,701,492 + OH686_17750 0.28 -1.4 3,701,492 + OH686_17750 0.28 -1.3 3,701,493 - OH686_17750 0.28 -0.2 3,701,493 - OH686_17750 0.28 -0.4 3,701,498 + OH686_17750 0.28 -0.4 3,701,498 + OH686_17750 0.28 +1.0 3,701,499 - OH686_17750 0.29 +0.2 3,701,499 - OH686_17750 0.29 +0.5
Or see this region's nucleotide sequence