Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_02885 and OH686_02890 are separated by 265 nucleotides OH686_02890 and OH686_02895 are separated by 19 nucleotides OH686_02895 and OH686_02900 overlap by 1 nucleotides
OH686_02885: OH686_02885 - Flagellin protein FlaA, at 604,492 to 606,051
_02885
OH686_02890: OH686_02890 - Cephalosporin hydroxylase, at 606,317 to 607,081
_02890
OH686_02895: OH686_02895 - UDP-glucose 4-epimerase , at 607,101 to 607,997
_02895
OH686_02900: OH686_02900 - SAM-dependent methyltransferase, at 607,997 to 609,220
_02900
Position (kb) 606
607
608 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 605.383 kb on - strand, within OH686_02885 at 605.435 kb on + strand, within OH686_02885 at 605.454 kb on + strand, within OH686_02885 at 605.465 kb on + strand, within OH686_02885 at 605.466 kb on - strand, within OH686_02885 at 605.474 kb on - strand, within OH686_02885 at 605.481 kb on + strand, within OH686_02885 at 605.490 kb on - strand, within OH686_02885 at 605.531 kb on + strand, within OH686_02885 at 605.531 kb on + strand, within OH686_02885 at 605.531 kb on + strand, within OH686_02885 at 605.531 kb on + strand, within OH686_02885 at 605.532 kb on - strand, within OH686_02885 at 605.532 kb on - strand, within OH686_02885 at 605.532 kb on - strand, within OH686_02885 at 605.532 kb on - strand, within OH686_02885 at 605.554 kb on - strand, within OH686_02885 at 605.778 kb on + strand, within OH686_02885 at 605.778 kb on + strand, within OH686_02885 at 605.778 kb on + strand, within OH686_02885 at 605.778 kb on + strand, within OH686_02885 at 605.778 kb on + strand, within OH686_02885 at 605.779 kb on - strand, within OH686_02885 at 605.779 kb on - strand, within OH686_02885 at 605.779 kb on - strand, within OH686_02885 at 605.779 kb on - strand, within OH686_02885 at 605.779 kb on - strand, within OH686_02885 at 605.779 kb on - strand, within OH686_02885 at 605.838 kb on + strand, within OH686_02885 at 605.838 kb on + strand, within OH686_02885 at 605.839 kb on - strand, within OH686_02885 at 605.973 kb on + strand at 605.973 kb on + strand at 605.973 kb on + strand at 605.973 kb on + strand at 605.974 kb on - strand at 605.974 kb on - strand at 605.974 kb on - strand at 605.974 kb on - strand at 605.974 kb on - strand at 606.077 kb on + strand at 606.077 kb on + strand at 606.077 kb on + strand at 606.077 kb on + strand at 606.077 kb on + strand at 606.078 kb on - strand at 606.078 kb on - strand at 606.078 kb on - strand at 606.078 kb on - strand at 606.132 kb on + strand at 606.154 kb on + strand at 606.178 kb on + strand at 606.188 kb on + strand at 606.267 kb on + strand at 606.352 kb on + strand at 606.353 kb on - strand at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.528 kb on + strand, within OH686_02890 at 606.529 kb on - strand, within OH686_02890 at 606.529 kb on - strand, within OH686_02890 at 606.529 kb on - strand, within OH686_02890 at 606.529 kb on - strand, within OH686_02890 at 606.529 kb on - strand, within OH686_02890 at 606.556 kb on - strand, within OH686_02890 at 606.556 kb on - strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.585 kb on + strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.586 kb on - strand, within OH686_02890 at 606.658 kb on + strand, within OH686_02890 at 606.696 kb on + strand, within OH686_02890 at 606.696 kb on + strand, within OH686_02890 at 606.696 kb on + strand, within OH686_02890 at 606.696 kb on + strand, within OH686_02890 at 606.696 kb on + strand, within OH686_02890 at 606.697 kb on - strand, within OH686_02890 at 606.697 kb on - strand, within OH686_02890 at 606.697 kb on - strand, within OH686_02890 at 606.697 kb on - strand, within OH686_02890 at 606.697 kb on - strand, within OH686_02890 at 606.764 kb on + strand, within OH686_02890 at 606.765 kb on - strand, within OH686_02890 at 606.801 kb on + strand, within OH686_02890 at 606.801 kb on + strand, within OH686_02890 at 606.801 kb on + strand, within OH686_02890 at 606.802 kb on - strand, within OH686_02890 at 606.802 kb on - strand, within OH686_02890 at 606.804 kb on + strand, within OH686_02890 at 606.804 kb on + strand, within OH686_02890 at 606.804 kb on + strand, within OH686_02890 at 606.804 kb on + strand, within OH686_02890 at 606.804 kb on + strand, within OH686_02890 at 606.804 kb on + strand, within OH686_02890 at 606.804 kb on + strand, within OH686_02890 at 606.804 kb on + strand, within OH686_02890 at 606.805 kb on - strand, within OH686_02890 at 606.805 kb on - strand, within OH686_02890 at 606.805 kb on - strand, within OH686_02890 at 606.805 kb on - strand, within OH686_02890 at 606.805 kb on - strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.864 kb on + strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.865 kb on - strand, within OH686_02890 at 606.934 kb on + strand, within OH686_02890 at 606.935 kb on - strand, within OH686_02890 at 606.935 kb on - strand, within OH686_02890 at 606.935 kb on - strand, within OH686_02890 at 606.935 kb on - strand, within OH686_02890 at 606.935 kb on - strand, within OH686_02890 at 606.936 kb on + strand, within OH686_02890 at 606.936 kb on + strand, within OH686_02890 at 606.937 kb on - strand, within OH686_02890 at 606.942 kb on + strand, within OH686_02890 at 606.942 kb on + strand, within OH686_02890 at 606.942 kb on + strand, within OH686_02890 at 606.942 kb on + strand, within OH686_02890 at 606.942 kb on + strand, within OH686_02890 at 606.942 kb on + strand, within OH686_02890 at 606.943 kb on - strand, within OH686_02890 at 606.943 kb on - strand, within OH686_02890 at 606.943 kb on - strand, within OH686_02890 at 606.943 kb on - strand, within OH686_02890 at 607.005 kb on + strand at 607.005 kb on + strand at 607.006 kb on - strand at 607.006 kb on - strand at 607.006 kb on - strand at 607.006 kb on - strand at 607.100 kb on - strand at 607.145 kb on + strand at 607.145 kb on + strand at 607.147 kb on + strand at 607.147 kb on + strand at 607.147 kb on + strand at 607.147 kb on + strand at 607.147 kb on + strand at 607.147 kb on + strand at 607.147 kb on + strand at 607.148 kb on - strand at 607.148 kb on - strand at 607.148 kb on - strand at 607.148 kb on - strand at 607.148 kb on - strand at 607.148 kb on - strand at 607.148 kb on - strand at 607.282 kb on + strand, within OH686_02895 at 607.282 kb on + strand, within OH686_02895 at 607.282 kb on + strand, within OH686_02895 at 607.283 kb on - strand, within OH686_02895 at 607.305 kb on + strand, within OH686_02895 at 607.327 kb on - strand, within OH686_02895 at 607.404 kb on + strand, within OH686_02895 at 607.404 kb on + strand, within OH686_02895 at 607.405 kb on - strand, within OH686_02895 at 607.405 kb on - strand, within OH686_02895 at 607.405 kb on - strand, within OH686_02895 at 607.459 kb on - strand, within OH686_02895 at 607.489 kb on + strand, within OH686_02895 at 607.490 kb on - strand, within OH686_02895 at 607.490 kb on - strand, within OH686_02895 at 607.498 kb on + strand, within OH686_02895 at 607.499 kb on - strand, within OH686_02895 at 607.499 kb on - strand, within OH686_02895 at 607.532 kb on + strand, within OH686_02895 at 607.533 kb on - strand, within OH686_02895 at 607.533 kb on - strand, within OH686_02895 at 607.571 kb on + strand, within OH686_02895 at 607.621 kb on + strand, within OH686_02895 at 607.621 kb on + strand, within OH686_02895 at 607.621 kb on + strand, within OH686_02895 at 607.621 kb on + strand, within OH686_02895 at 607.621 kb on + strand, within OH686_02895 at 607.622 kb on - strand, within OH686_02895 at 607.622 kb on - strand, within OH686_02895 at 607.654 kb on + strand, within OH686_02895 at 607.654 kb on + strand, within OH686_02895 at 607.654 kb on + strand, within OH686_02895 at 607.655 kb on - strand, within OH686_02895 at 607.765 kb on + strand, within OH686_02895 at 607.765 kb on + strand, within OH686_02895 at 607.765 kb on + strand, within OH686_02895 at 607.765 kb on + strand, within OH686_02895 at 607.765 kb on + strand, within OH686_02895 at 607.765 kb on + strand, within OH686_02895 at 607.765 kb on + strand, within OH686_02895 at 607.766 kb on - strand, within OH686_02895 at 607.766 kb on - strand, within OH686_02895 at 607.766 kb on - strand, within OH686_02895 at 607.766 kb on - strand, within OH686_02895 at 607.766 kb on - strand, within OH686_02895 at 607.766 kb on - strand, within OH686_02895 at 607.820 kb on + strand, within OH686_02895 at 607.821 kb on - strand, within OH686_02895 at 607.862 kb on + strand, within OH686_02895 at 607.862 kb on + strand, within OH686_02895 at 607.863 kb on - strand, within OH686_02895 at 607.863 kb on - strand, within OH686_02895 at 607.867 kb on + strand, within OH686_02895 at 608.072 kb on + strand at 608.072 kb on + strand at 608.073 kb on - strand at 608.073 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 605,383 - OH686_02885 0.57 +0.1 605,435 + OH686_02885 0.60 +0.7 605,454 + OH686_02885 0.62 +0.1 605,465 + OH686_02885 0.62 +0.3 605,466 - OH686_02885 0.62 +2.0 605,474 - OH686_02885 0.63 +1.1 605,481 + OH686_02885 0.63 +0.3 605,490 - OH686_02885 0.64 +0.8 605,531 + OH686_02885 0.67 +0.6 605,531 + OH686_02885 0.67 -0.0 605,531 + OH686_02885 0.67 -0.1 605,531 + OH686_02885 0.67 +0.1 605,532 - OH686_02885 0.67 +0.9 605,532 - OH686_02885 0.67 -0.3 605,532 - OH686_02885 0.67 -0.6 605,532 - OH686_02885 0.67 -0.0 605,554 - OH686_02885 0.68 +0.4 605,778 + OH686_02885 0.82 +0.1 605,778 + OH686_02885 0.82 -1.0 605,778 + OH686_02885 0.82 +1.4 605,778 + OH686_02885 0.82 -0.0 605,778 + OH686_02885 0.82 +1.5 605,779 - OH686_02885 0.82 +0.3 605,779 - OH686_02885 0.82 -1.0 605,779 - OH686_02885 0.82 -1.3 605,779 - OH686_02885 0.82 +0.7 605,779 - OH686_02885 0.82 -0.4 605,779 - OH686_02885 0.82 +0.1 605,838 + OH686_02885 0.86 +0.5 605,838 + OH686_02885 0.86 +0.8 605,839 - OH686_02885 0.86 -0.2 605,973 + +0.6 605,973 + +0.1 605,973 + +0.1 605,973 + -0.3 605,974 - -0.2 605,974 - +0.5 605,974 - -0.1 605,974 - +0.6 605,974 - +0.1 606,077 + +1.0 606,077 + +0.0 606,077 + +0.6 606,077 + +1.5 606,077 + -0.3 606,078 - -0.0 606,078 - -0.1 606,078 - +1.1 606,078 - +0.4 606,132 + -0.4 606,154 + +1.2 606,178 + -0.8 606,188 + -0.1 606,267 + +0.2 606,352 + -0.1 606,353 - +0.4 606,528 + OH686_02890 0.28 +0.4 606,528 + OH686_02890 0.28 -0.3 606,528 + OH686_02890 0.28 -1.0 606,528 + OH686_02890 0.28 +0.1 606,528 + OH686_02890 0.28 -0.1 606,528 + OH686_02890 0.28 +0.2 606,528 + OH686_02890 0.28 -1.3 606,528 + OH686_02890 0.28 +0.4 606,528 + OH686_02890 0.28 -1.5 606,528 + OH686_02890 0.28 -0.5 606,528 + OH686_02890 0.28 -0.5 606,529 - OH686_02890 0.28 -1.3 606,529 - OH686_02890 0.28 +0.0 606,529 - OH686_02890 0.28 -0.2 606,529 - OH686_02890 0.28 -0.4 606,529 - OH686_02890 0.28 -0.6 606,556 - OH686_02890 0.31 +0.4 606,556 - OH686_02890 0.31 +0.4 606,585 + OH686_02890 0.35 -0.4 606,585 + OH686_02890 0.35 -0.6 606,585 + OH686_02890 0.35 -2.1 606,585 + OH686_02890 0.35 +0.6 606,585 + OH686_02890 0.35 -0.2 606,585 + OH686_02890 0.35 -0.5 606,585 + OH686_02890 0.35 -0.2 606,585 + OH686_02890 0.35 -0.5 606,585 + OH686_02890 0.35 -0.3 606,585 + OH686_02890 0.35 -0.1 606,585 + OH686_02890 0.35 -0.1 606,585 + OH686_02890 0.35 +0.0 606,585 + OH686_02890 0.35 -2.9 606,586 - OH686_02890 0.35 +0.7 606,586 - OH686_02890 0.35 +0.2 606,586 - OH686_02890 0.35 -1.1 606,586 - OH686_02890 0.35 -0.9 606,586 - OH686_02890 0.35 -0.9 606,586 - OH686_02890 0.35 -2.3 606,586 - OH686_02890 0.35 +0.8 606,586 - OH686_02890 0.35 -1.2 606,586 - OH686_02890 0.35 +0.5 606,586 - OH686_02890 0.35 -0.7 606,586 - OH686_02890 0.35 -0.9 606,586 - OH686_02890 0.35 -0.4 606,586 - OH686_02890 0.35 -1.5 606,586 - OH686_02890 0.35 -1.2 606,658 + OH686_02890 0.45 -0.3 606,696 + OH686_02890 0.50 -0.6 606,696 + OH686_02890 0.50 +0.3 606,696 + OH686_02890 0.50 -0.9 606,696 + OH686_02890 0.50 -0.2 606,696 + OH686_02890 0.50 -1.2 606,697 - OH686_02890 0.50 -0.3 606,697 - OH686_02890 0.50 -0.6 606,697 - OH686_02890 0.50 -1.4 606,697 - OH686_02890 0.50 +0.7 606,697 - OH686_02890 0.50 -0.1 606,764 + OH686_02890 0.58 +0.3 606,765 - OH686_02890 0.59 -0.2 606,801 + OH686_02890 0.63 -0.0 606,801 + OH686_02890 0.63 -0.2 606,801 + OH686_02890 0.63 +1.0 606,802 - OH686_02890 0.63 -0.8 606,802 - OH686_02890 0.63 +0.5 606,804 + OH686_02890 0.64 -0.0 606,804 + OH686_02890 0.64 -0.2 606,804 + OH686_02890 0.64 +0.4 606,804 + OH686_02890 0.64 +0.1 606,804 + OH686_02890 0.64 -0.0 606,804 + OH686_02890 0.64 +0.2 606,804 + OH686_02890 0.64 +1.1 606,804 + OH686_02890 0.64 -1.5 606,805 - OH686_02890 0.64 +0.4 606,805 - OH686_02890 0.64 -0.2 606,805 - OH686_02890 0.64 -0.6 606,805 - OH686_02890 0.64 +0.3 606,805 - OH686_02890 0.64 +0.3 606,864 + OH686_02890 0.72 -0.3 606,864 + OH686_02890 0.72 -0.0 606,864 + OH686_02890 0.72 -0.6 606,864 + OH686_02890 0.72 +0.1 606,864 + OH686_02890 0.72 -0.3 606,864 + OH686_02890 0.72 -0.6 606,864 + OH686_02890 0.72 +1.9 606,864 + OH686_02890 0.72 +0.4 606,864 + OH686_02890 0.72 +0.2 606,865 - OH686_02890 0.72 +0.5 606,865 - OH686_02890 0.72 -0.5 606,865 - OH686_02890 0.72 +0.3 606,865 - OH686_02890 0.72 +0.8 606,865 - OH686_02890 0.72 +0.8 606,865 - OH686_02890 0.72 -0.9 606,865 - OH686_02890 0.72 +0.1 606,865 - OH686_02890 0.72 -0.6 606,865 - OH686_02890 0.72 +0.2 606,865 - OH686_02890 0.72 +0.0 606,865 - OH686_02890 0.72 +0.5 606,934 + OH686_02890 0.81 -0.4 606,935 - OH686_02890 0.81 +0.6 606,935 - OH686_02890 0.81 +0.3 606,935 - OH686_02890 0.81 -0.9 606,935 - OH686_02890 0.81 -0.4 606,935 - OH686_02890 0.81 -0.7 606,936 + OH686_02890 0.81 -0.6 606,936 + OH686_02890 0.81 +0.4 606,937 - OH686_02890 0.81 -0.0 606,942 + OH686_02890 0.82 -0.8 606,942 + OH686_02890 0.82 -0.9 606,942 + OH686_02890 0.82 +0.1 606,942 + OH686_02890 0.82 -1.7 606,942 + OH686_02890 0.82 -0.4 606,942 + OH686_02890 0.82 +1.1 606,943 - OH686_02890 0.82 +0.7 606,943 - OH686_02890 0.82 -1.4 606,943 - OH686_02890 0.82 -0.7 606,943 - OH686_02890 0.82 -1.5 607,005 + -0.8 607,005 + -0.2 607,006 - -2.4 607,006 - +0.2 607,006 - -0.2 607,006 - -0.0 607,100 - -0.4 607,145 + -0.3 607,145 + +1.7 607,147 + -0.4 607,147 + -0.9 607,147 + +0.1 607,147 + -0.0 607,147 + -0.5 607,147 + -0.9 607,147 + -0.3 607,148 - -0.3 607,148 - -0.7 607,148 - -1.6 607,148 - -0.7 607,148 - +0.1 607,148 - -0.2 607,148 - -0.6 607,282 + OH686_02895 0.20 -0.4 607,282 + OH686_02895 0.20 -1.2 607,282 + OH686_02895 0.20 -0.1 607,283 - OH686_02895 0.20 -0.9 607,305 + OH686_02895 0.23 +0.2 607,327 - OH686_02895 0.25 +2.1 607,404 + OH686_02895 0.34 +0.3 607,404 + OH686_02895 0.34 -1.0 607,405 - OH686_02895 0.34 -0.7 607,405 - OH686_02895 0.34 -1.4 607,405 - OH686_02895 0.34 +0.0 607,459 - OH686_02895 0.40 -0.6 607,489 + OH686_02895 0.43 -1.0 607,490 - OH686_02895 0.43 -1.3 607,490 - OH686_02895 0.43 -0.4 607,498 + OH686_02895 0.44 +0.7 607,499 - OH686_02895 0.44 +0.4 607,499 - OH686_02895 0.44 -0.1 607,532 + OH686_02895 0.48 -0.3 607,533 - OH686_02895 0.48 +0.3 607,533 - OH686_02895 0.48 -0.4 607,571 + OH686_02895 0.52 +0.4 607,621 + OH686_02895 0.58 -0.3 607,621 + OH686_02895 0.58 +0.2 607,621 + OH686_02895 0.58 -0.9 607,621 + OH686_02895 0.58 +0.4 607,621 + OH686_02895 0.58 +1.4 607,622 - OH686_02895 0.58 +0.0 607,622 - OH686_02895 0.58 -0.9 607,654 + OH686_02895 0.62 +0.2 607,654 + OH686_02895 0.62 +0.1 607,654 + OH686_02895 0.62 -0.3 607,655 - OH686_02895 0.62 -0.8 607,765 + OH686_02895 0.74 -0.1 607,765 + OH686_02895 0.74 -0.6 607,765 + OH686_02895 0.74 +0.2 607,765 + OH686_02895 0.74 -1.4 607,765 + OH686_02895 0.74 -0.4 607,765 + OH686_02895 0.74 +0.4 607,765 + OH686_02895 0.74 -0.8 607,766 - OH686_02895 0.74 -1.5 607,766 - OH686_02895 0.74 -1.0 607,766 - OH686_02895 0.74 +0.9 607,766 - OH686_02895 0.74 -1.0 607,766 - OH686_02895 0.74 -0.7 607,766 - OH686_02895 0.74 +0.0 607,820 + OH686_02895 0.80 -0.4 607,821 - OH686_02895 0.80 -1.8 607,862 + OH686_02895 0.85 +0.2 607,862 + OH686_02895 0.85 -0.5 607,863 - OH686_02895 0.85 -0.8 607,863 - OH686_02895 0.85 -1.6 607,867 + OH686_02895 0.85 -0.5 608,072 + -1.1 608,072 + -0.1 608,073 - +1.7 608,073 - -0.7
Or see this region's nucleotide sequence