Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_24880 and IAI46_24885 are separated by 274 nucleotides IAI46_24885 and IAI46_24890 are separated by 54 nucleotides IAI46_24890 and IAI46_24895 are separated by 22 nucleotides
IAI46_24880: IAI46_24880 - NAD-dependent DNA ligase LigB, at 5,306,571 to 5,308,274
_24880
IAI46_24885: IAI46_24885 - guanylate kinase, at 5,308,549 to 5,309,172
_24885
IAI46_24890: IAI46_24890 - DNA-directed RNA polymerase subunit omega, at 5,309,227 to 5,309,502
_24890
IAI46_24895: IAI46_24895 - bifunctional GTP diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase, at 5,309,525 to 5,311,636
_24895
Position (kb)
5308
5309
5310 Strain fitness (log2 ratio)
-2
-1
0
1 at 5307.550 kb on - strand, within IAI46_24880 at 5307.616 kb on - strand, within IAI46_24880 at 5307.629 kb on + strand, within IAI46_24880 at 5307.752 kb on + strand, within IAI46_24880 at 5307.753 kb on - strand, within IAI46_24880 at 5307.753 kb on - strand, within IAI46_24880 at 5307.756 kb on - strand, within IAI46_24880 at 5307.756 kb on - strand, within IAI46_24880 at 5307.776 kb on + strand, within IAI46_24880 at 5307.777 kb on - strand, within IAI46_24880 at 5307.777 kb on - strand, within IAI46_24880 at 5307.777 kb on - strand, within IAI46_24880 at 5307.777 kb on - strand, within IAI46_24880 at 5308.078 kb on + strand, within IAI46_24880 at 5308.095 kb on + strand, within IAI46_24880 at 5308.114 kb on + strand at 5308.114 kb on + strand at 5308.117 kb on + strand at 5308.117 kb on + strand at 5308.123 kb on - strand at 5308.251 kb on + strand at 5308.252 kb on - strand at 5308.401 kb on + strand at 5308.401 kb on + strand at 5308.465 kb on - strand at 5308.465 kb on - strand at 5308.484 kb on + strand at 5308.492 kb on + strand at 5308.492 kb on + strand at 5308.494 kb on + strand at 5308.532 kb on + strand at 5309.159 kb on + strand at 5309.159 kb on + strand at 5309.159 kb on + strand at 5309.188 kb on + strand at 5309.188 kb on + strand at 5309.226 kb on + strand at 5309.362 kb on + strand, within IAI46_24890
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 5,307,550 - IAI46_24880 0.57 +0.4 5,307,616 - IAI46_24880 0.61 +0.6 5,307,629 + IAI46_24880 0.62 -1.9 5,307,752 + IAI46_24880 0.69 -0.4 5,307,753 - IAI46_24880 0.69 -0.8 5,307,753 - IAI46_24880 0.69 -0.3 5,307,756 - IAI46_24880 0.70 +0.1 5,307,756 - IAI46_24880 0.70 +0.8 5,307,776 + IAI46_24880 0.71 +0.1 5,307,777 - IAI46_24880 0.71 +0.2 5,307,777 - IAI46_24880 0.71 -0.2 5,307,777 - IAI46_24880 0.71 +0.2 5,307,777 - IAI46_24880 0.71 +0.2 5,308,078 + IAI46_24880 0.88 +0.1 5,308,095 + IAI46_24880 0.89 -1.2 5,308,114 + -0.8 5,308,114 + -0.1 5,308,117 + -0.2 5,308,117 + -0.6 5,308,123 - -1.1 5,308,251 + +0.1 5,308,252 - -0.1 5,308,401 + +0.2 5,308,401 + -0.9 5,308,465 - -0.0 5,308,465 - +0.4 5,308,484 + -0.1 5,308,492 + +0.0 5,308,492 + +0.6 5,308,494 + -0.3 5,308,532 + +0.7 5,309,159 + -0.1 5,309,159 + +0.2 5,309,159 + +0.6 5,309,188 + +0.8 5,309,188 + +0.2 5,309,226 + -0.4 5,309,362 + IAI46_24890 0.49 +0.3
Or see this region's nucleotide sequence