Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_22735 and IAI46_22740 are separated by 0 nucleotides IAI46_22740 and IAI46_22745 are separated by 241 nucleotides IAI46_22745 and IAI46_22750 are separated by 31 nucleotides IAI46_22750 and IAI46_22755 are separated by 10 nucleotides
IAI46_22735: IAI46_22735 - protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 4,841,736 to 4,842,737
_22735
IAI46_22740: IAI46_22740 - protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 4,842,738 to 4,843,337
_22740
IAI46_22745: IAI46_22745 - type II 3-dehydroquinate dehydratase, at 4,843,579 to 4,844,031
_22745
IAI46_22750: IAI46_22750 - acetyl-CoA carboxylase biotin carboxyl carrier protein, at 4,844,063 to 4,844,527
_22750
IAI46_22755: IAI46_22755 - acetyl-CoA carboxylase biotin carboxylase subunit, at 4,844,538 to 4,845,887
_22755
Position (kb)
4843
4844
4845 Strain fitness (log2 ratio)
-1
0
1
2 at 4842.650 kb on + strand at 4842.651 kb on - strand at 4842.674 kb on + strand at 4842.694 kb on + strand at 4842.694 kb on + strand at 4842.695 kb on - strand at 4842.722 kb on - strand at 4842.722 kb on - strand at 4842.722 kb on - strand at 4842.722 kb on - strand at 4842.746 kb on - strand at 4842.746 kb on - strand at 4842.758 kb on + strand at 4842.759 kb on - strand at 4842.759 kb on - strand at 4842.783 kb on + strand at 4842.783 kb on + strand at 4842.784 kb on - strand at 4842.937 kb on - strand, within IAI46_22740 at 4842.982 kb on + strand, within IAI46_22740 at 4842.982 kb on + strand, within IAI46_22740 at 4842.983 kb on - strand, within IAI46_22740 at 4842.983 kb on - strand, within IAI46_22740 at 4842.983 kb on - strand, within IAI46_22740 at 4842.983 kb on - strand, within IAI46_22740 at 4843.020 kb on + strand, within IAI46_22740 at 4843.021 kb on - strand, within IAI46_22740 at 4843.021 kb on - strand, within IAI46_22740 at 4843.086 kb on + strand, within IAI46_22740 at 4843.087 kb on - strand, within IAI46_22740 at 4843.160 kb on + strand, within IAI46_22740 at 4843.191 kb on - strand, within IAI46_22740 at 4843.309 kb on - strand at 4843.369 kb on + strand at 4843.402 kb on + strand at 4843.769 kb on + strand, within IAI46_22745 at 4843.769 kb on + strand, within IAI46_22745 at 4843.797 kb on + strand, within IAI46_22745 at 4843.930 kb on + strand, within IAI46_22745
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 4,842,650 + -0.4 4,842,651 - -0.0 4,842,674 + +1.6 4,842,694 + -0.3 4,842,694 + +0.6 4,842,695 - +0.8 4,842,722 - +0.5 4,842,722 - +0.3 4,842,722 - +1.2 4,842,722 - +0.2 4,842,746 - +0.5 4,842,746 - -1.4 4,842,758 + +0.4 4,842,759 - +0.1 4,842,759 - +0.2 4,842,783 + -0.2 4,842,783 + +0.3 4,842,784 - +0.7 4,842,937 - IAI46_22740 0.33 +0.4 4,842,982 + IAI46_22740 0.41 -0.2 4,842,982 + IAI46_22740 0.41 +0.5 4,842,983 - IAI46_22740 0.41 -0.2 4,842,983 - IAI46_22740 0.41 +0.3 4,842,983 - IAI46_22740 0.41 -0.0 4,842,983 - IAI46_22740 0.41 +0.4 4,843,020 + IAI46_22740 0.47 +0.1 4,843,021 - IAI46_22740 0.47 -0.1 4,843,021 - IAI46_22740 0.47 -0.5 4,843,086 + IAI46_22740 0.58 -0.9 4,843,087 - IAI46_22740 0.58 -0.1 4,843,160 + IAI46_22740 0.70 +2.0 4,843,191 - IAI46_22740 0.76 +0.4 4,843,309 - +0.3 4,843,369 + -0.2 4,843,402 + +0.6 4,843,769 + IAI46_22745 0.42 -0.3 4,843,769 + IAI46_22745 0.42 +1.3 4,843,797 + IAI46_22745 0.48 -0.5 4,843,930 + IAI46_22745 0.77 -1.5
Or see this region's nucleotide sequence