Strain Fitness in Serratia liquefaciens MT49 around IAI46_22745

Experiment: No stress control, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_22735 and IAI46_22740 are separated by 0 nucleotidesIAI46_22740 and IAI46_22745 are separated by 241 nucleotidesIAI46_22745 and IAI46_22750 are separated by 31 nucleotidesIAI46_22750 and IAI46_22755 are separated by 10 nucleotides IAI46_22735: IAI46_22735 - protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 4,841,736 to 4,842,737 _22735 IAI46_22740: IAI46_22740 - protein-methionine-sulfoxide reductase heme-binding subunit MsrQ, at 4,842,738 to 4,843,337 _22740 IAI46_22745: IAI46_22745 - type II 3-dehydroquinate dehydratase, at 4,843,579 to 4,844,031 _22745 IAI46_22750: IAI46_22750 - acetyl-CoA carboxylase biotin carboxyl carrier protein, at 4,844,063 to 4,844,527 _22750 IAI46_22755: IAI46_22755 - acetyl-CoA carboxylase biotin carboxylase subunit, at 4,844,538 to 4,845,887 _22755 Position (kb) 4843 4844 4845Strain fitness (log2 ratio) -1 0 1 2at 4842.650 kb on + strandat 4842.651 kb on - strandat 4842.674 kb on + strandat 4842.694 kb on + strandat 4842.694 kb on + strandat 4842.695 kb on - strandat 4842.722 kb on - strandat 4842.722 kb on - strandat 4842.722 kb on - strandat 4842.722 kb on - strandat 4842.746 kb on - strandat 4842.746 kb on - strandat 4842.758 kb on + strandat 4842.759 kb on - strandat 4842.759 kb on - strandat 4842.783 kb on + strandat 4842.783 kb on + strandat 4842.784 kb on - strandat 4842.937 kb on - strand, within IAI46_22740at 4842.982 kb on + strand, within IAI46_22740at 4842.982 kb on + strand, within IAI46_22740at 4842.983 kb on - strand, within IAI46_22740at 4842.983 kb on - strand, within IAI46_22740at 4842.983 kb on - strand, within IAI46_22740at 4842.983 kb on - strand, within IAI46_22740at 4843.020 kb on + strand, within IAI46_22740at 4843.021 kb on - strand, within IAI46_22740at 4843.021 kb on - strand, within IAI46_22740at 4843.086 kb on + strand, within IAI46_22740at 4843.087 kb on - strand, within IAI46_22740at 4843.160 kb on + strand, within IAI46_22740at 4843.191 kb on - strand, within IAI46_22740at 4843.309 kb on - strandat 4843.369 kb on + strandat 4843.402 kb on + strandat 4843.769 kb on + strand, within IAI46_22745at 4843.769 kb on + strand, within IAI46_22745at 4843.797 kb on + strand, within IAI46_22745at 4843.930 kb on + strand, within IAI46_22745

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Per-strain Table

Position Strand Gene LocusTag Fraction No stress control, aerobic
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4,842,650 + -0.4
4,842,651 - -0.0
4,842,674 + +1.6
4,842,694 + -0.3
4,842,694 + +0.6
4,842,695 - +0.8
4,842,722 - +0.5
4,842,722 - +0.3
4,842,722 - +1.2
4,842,722 - +0.2
4,842,746 - +0.5
4,842,746 - -1.4
4,842,758 + +0.4
4,842,759 - +0.1
4,842,759 - +0.2
4,842,783 + -0.2
4,842,783 + +0.3
4,842,784 - +0.7
4,842,937 - IAI46_22740 0.33 +0.4
4,842,982 + IAI46_22740 0.41 -0.2
4,842,982 + IAI46_22740 0.41 +0.5
4,842,983 - IAI46_22740 0.41 -0.2
4,842,983 - IAI46_22740 0.41 +0.3
4,842,983 - IAI46_22740 0.41 -0.0
4,842,983 - IAI46_22740 0.41 +0.4
4,843,020 + IAI46_22740 0.47 +0.1
4,843,021 - IAI46_22740 0.47 -0.1
4,843,021 - IAI46_22740 0.47 -0.5
4,843,086 + IAI46_22740 0.58 -0.9
4,843,087 - IAI46_22740 0.58 -0.1
4,843,160 + IAI46_22740 0.70 +2.0
4,843,191 - IAI46_22740 0.76 +0.4
4,843,309 - +0.3
4,843,369 + -0.2
4,843,402 + +0.6
4,843,769 + IAI46_22745 0.42 -0.3
4,843,769 + IAI46_22745 0.42 +1.3
4,843,797 + IAI46_22745 0.48 -0.5
4,843,930 + IAI46_22745 0.77 -1.5

Or see this region's nucleotide sequence