Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_21670 and IAI46_21675 are separated by 580 nucleotides IAI46_21675 and IAI46_21680 are separated by 230 nucleotides
IAI46_21670: IAI46_21670 - ShlB/FhaC/HecB family hemolysin secretion/activation protein, at 4,606,491 to 4,608,206
_21670
IAI46_21675: IAI46_21675 - aminoimidazole riboside kinase, at 4,608,787 to 4,609,716
_21675
IAI46_21680: IAI46_21680 - carbohydrate porin, at 4,609,947 to 4,611,356
_21680
Position (kb)
4608
4609
4610 Strain fitness (log2 ratio)
-1
0
1
2 at 4607.787 kb on - strand, within IAI46_21670 at 4607.787 kb on - strand, within IAI46_21670 at 4607.794 kb on + strand, within IAI46_21670 at 4607.825 kb on + strand, within IAI46_21670 at 4607.826 kb on - strand, within IAI46_21670 at 4607.978 kb on + strand, within IAI46_21670 at 4607.978 kb on + strand, within IAI46_21670 at 4607.979 kb on - strand, within IAI46_21670 at 4608.070 kb on - strand at 4608.070 kb on - strand at 4608.070 kb on - strand at 4608.070 kb on - strand at 4608.122 kb on + strand at 4608.126 kb on + strand at 4608.127 kb on - strand at 4608.156 kb on - strand at 4608.191 kb on - strand at 4608.191 kb on - strand at 4608.208 kb on - strand at 4608.233 kb on - strand at 4608.233 kb on - strand at 4608.265 kb on + strand at 4608.265 kb on + strand at 4608.266 kb on - strand at 4608.277 kb on + strand at 4608.278 kb on - strand at 4608.278 kb on - strand at 4608.321 kb on - strand at 4608.336 kb on - strand at 4608.416 kb on - strand at 4608.419 kb on + strand at 4608.548 kb on - strand at 4608.559 kb on + strand at 4608.559 kb on + strand at 4608.632 kb on + strand at 4608.633 kb on - strand at 4608.647 kb on + strand at 4608.647 kb on + strand at 4608.647 kb on + strand at 4608.670 kb on + strand at 4608.671 kb on - strand at 4608.671 kb on - strand at 4608.800 kb on + strand at 4608.857 kb on + strand at 4608.858 kb on + strand at 4608.858 kb on + strand at 4608.858 kb on + strand at 4608.858 kb on + strand at 4608.859 kb on - strand at 4609.005 kb on + strand, within IAI46_21675 at 4609.005 kb on + strand, within IAI46_21675 at 4609.006 kb on - strand, within IAI46_21675 at 4609.168 kb on - strand, within IAI46_21675 at 4609.374 kb on + strand, within IAI46_21675 at 4609.460 kb on + strand, within IAI46_21675 at 4609.460 kb on + strand, within IAI46_21675 at 4609.461 kb on - strand, within IAI46_21675 at 4609.466 kb on + strand, within IAI46_21675 at 4609.466 kb on + strand, within IAI46_21675 at 4609.467 kb on - strand, within IAI46_21675 at 4609.467 kb on - strand, within IAI46_21675 at 4609.525 kb on - strand, within IAI46_21675 at 4609.756 kb on + strand at 4609.768 kb on - strand at 4609.825 kb on - strand at 4609.839 kb on - strand at 4609.920 kb on - strand at 4609.963 kb on - strand at 4609.963 kb on - strand at 4609.963 kb on - strand at 4610.144 kb on + strand, within IAI46_21680 at 4610.243 kb on - strand, within IAI46_21680 at 4610.383 kb on + strand, within IAI46_21680 at 4610.383 kb on + strand, within IAI46_21680 at 4610.384 kb on - strand, within IAI46_21680 at 4610.384 kb on - strand, within IAI46_21680 at 4610.547 kb on + strand, within IAI46_21680 at 4610.547 kb on + strand, within IAI46_21680 at 4610.548 kb on - strand, within IAI46_21680 at 4610.548 kb on - strand, within IAI46_21680 at 4610.548 kb on - strand, within IAI46_21680 at 4610.613 kb on + strand, within IAI46_21680 at 4610.614 kb on - strand, within IAI46_21680 at 4610.631 kb on + strand, within IAI46_21680 at 4610.632 kb on - strand, within IAI46_21680 at 4610.632 kb on - strand, within IAI46_21680 at 4610.632 kb on - strand, within IAI46_21680 at 4610.632 kb on - strand, within IAI46_21680 at 4610.633 kb on + strand, within IAI46_21680 at 4610.633 kb on + strand, within IAI46_21680 at 4610.633 kb on + strand, within IAI46_21680 at 4610.633 kb on + strand, within IAI46_21680 at 4610.633 kb on + strand, within IAI46_21680 at 4610.633 kb on + strand, within IAI46_21680 at 4610.634 kb on - strand, within IAI46_21680 at 4610.634 kb on - strand, within IAI46_21680 at 4610.634 kb on - strand, within IAI46_21680 at 4610.637 kb on + strand, within IAI46_21680 at 4610.637 kb on + strand, within IAI46_21680 at 4610.637 kb on + strand, within IAI46_21680 at 4610.637 kb on + strand, within IAI46_21680 at 4610.638 kb on - strand, within IAI46_21680 at 4610.638 kb on - strand, within IAI46_21680 at 4610.663 kb on + strand, within IAI46_21680 at 4610.663 kb on + strand, within IAI46_21680 at 4610.664 kb on - strand, within IAI46_21680 at 4610.712 kb on + strand, within IAI46_21680 at 4610.713 kb on - strand, within IAI46_21680
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 4,607,787 - IAI46_21670 0.76 +0.3 4,607,787 - IAI46_21670 0.76 -0.3 4,607,794 + IAI46_21670 0.76 +0.3 4,607,825 + IAI46_21670 0.78 -0.3 4,607,826 - IAI46_21670 0.78 +0.2 4,607,978 + IAI46_21670 0.87 +0.3 4,607,978 + IAI46_21670 0.87 -0.3 4,607,979 - IAI46_21670 0.87 -0.6 4,608,070 - +1.5 4,608,070 - +0.4 4,608,070 - -1.0 4,608,070 - +0.3 4,608,122 + -0.8 4,608,126 + +0.8 4,608,127 - -1.0 4,608,156 - +0.9 4,608,191 - -0.1 4,608,191 - +0.9 4,608,208 - -0.5 4,608,233 - +0.4 4,608,233 - +0.4 4,608,265 + +0.3 4,608,265 + -0.7 4,608,266 - +0.6 4,608,277 + +0.6 4,608,278 - +1.0 4,608,278 - -0.2 4,608,321 - -0.3 4,608,336 - +0.1 4,608,416 - -1.0 4,608,419 + -0.3 4,608,548 - +0.7 4,608,559 + -0.3 4,608,559 + -0.3 4,608,632 + +0.4 4,608,633 - +0.7 4,608,647 + +0.7 4,608,647 + +0.1 4,608,647 + -1.2 4,608,670 + +0.3 4,608,671 - -0.2 4,608,671 - +0.2 4,608,800 + +0.2 4,608,857 + +0.3 4,608,858 + +1.6 4,608,858 + -0.1 4,608,858 + +0.5 4,608,858 + +0.2 4,608,859 - +0.3 4,609,005 + IAI46_21675 0.23 -0.0 4,609,005 + IAI46_21675 0.23 +1.8 4,609,006 - IAI46_21675 0.24 +0.5 4,609,168 - IAI46_21675 0.41 -0.4 4,609,374 + IAI46_21675 0.63 +2.5 4,609,460 + IAI46_21675 0.72 +0.1 4,609,460 + IAI46_21675 0.72 -0.2 4,609,461 - IAI46_21675 0.72 -0.1 4,609,466 + IAI46_21675 0.73 +0.5 4,609,466 + IAI46_21675 0.73 +0.7 4,609,467 - IAI46_21675 0.73 +0.7 4,609,467 - IAI46_21675 0.73 -0.5 4,609,525 - IAI46_21675 0.79 +0.2 4,609,756 + +0.5 4,609,768 - -0.3 4,609,825 - -0.2 4,609,839 - -0.3 4,609,920 - -0.8 4,609,963 - -0.7 4,609,963 - -0.5 4,609,963 - +1.4 4,610,144 + IAI46_21680 0.14 -0.1 4,610,243 - IAI46_21680 0.21 +0.2 4,610,383 + IAI46_21680 0.31 -0.3 4,610,383 + IAI46_21680 0.31 +0.0 4,610,384 - IAI46_21680 0.31 +0.9 4,610,384 - IAI46_21680 0.31 +1.3 4,610,547 + IAI46_21680 0.43 +0.1 4,610,547 + IAI46_21680 0.43 -0.1 4,610,548 - IAI46_21680 0.43 +0.8 4,610,548 - IAI46_21680 0.43 -0.3 4,610,548 - IAI46_21680 0.43 +0.8 4,610,613 + IAI46_21680 0.47 +0.7 4,610,614 - IAI46_21680 0.47 -0.1 4,610,631 + IAI46_21680 0.49 -0.7 4,610,632 - IAI46_21680 0.49 +0.4 4,610,632 - IAI46_21680 0.49 +0.8 4,610,632 - IAI46_21680 0.49 +0.7 4,610,632 - IAI46_21680 0.49 +0.2 4,610,633 + IAI46_21680 0.49 -1.3 4,610,633 + IAI46_21680 0.49 -0.6 4,610,633 + IAI46_21680 0.49 -1.1 4,610,633 + IAI46_21680 0.49 -1.0 4,610,633 + IAI46_21680 0.49 +0.1 4,610,633 + IAI46_21680 0.49 +0.7 4,610,634 - IAI46_21680 0.49 -0.3 4,610,634 - IAI46_21680 0.49 +0.3 4,610,634 - IAI46_21680 0.49 +0.4 4,610,637 + IAI46_21680 0.49 -0.2 4,610,637 + IAI46_21680 0.49 +0.1 4,610,637 + IAI46_21680 0.49 +0.8 4,610,637 + IAI46_21680 0.49 -1.4 4,610,638 - IAI46_21680 0.49 -0.4 4,610,638 - IAI46_21680 0.49 +0.7 4,610,663 + IAI46_21680 0.51 +1.0 4,610,663 + IAI46_21680 0.51 +0.2 4,610,664 - IAI46_21680 0.51 +0.9 4,610,712 + IAI46_21680 0.54 +0.5 4,610,713 - IAI46_21680 0.54 -0.7
Or see this region's nucleotide sequence