Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_20850 and IAI46_20855 are separated by 86 nucleotides IAI46_20855 and IAI46_20860 are separated by 44 nucleotides
IAI46_20850: IAI46_20850 - aminomethyl-transferring glycine dehydrogenase, at 4,412,139 to 4,415,018
_20850
IAI46_20855: IAI46_20855 - glycine cleavage system protein GcvH, at 4,415,105 to 4,415,491
_20855
IAI46_20860: IAI46_20860 - glycine cleavage system aminomethyltransferase GcvT, at 4,415,536 to 4,416,633
_20860
Position (kb)
4415
4416 Strain fitness (log2 ratio)
-2
-1
0
1 at 4414.271 kb on + strand, within IAI46_20850 at 4414.272 kb on - strand, within IAI46_20850 at 4414.272 kb on - strand, within IAI46_20850 at 4414.334 kb on - strand, within IAI46_20850 at 4414.334 kb on - strand, within IAI46_20850 at 4414.482 kb on + strand, within IAI46_20850 at 4414.482 kb on + strand, within IAI46_20850 at 4414.482 kb on + strand, within IAI46_20850 at 4414.482 kb on + strand, within IAI46_20850 at 4414.483 kb on - strand, within IAI46_20850 at 4414.483 kb on - strand, within IAI46_20850 at 4414.483 kb on - strand, within IAI46_20850 at 4414.483 kb on - strand, within IAI46_20850 at 4414.662 kb on + strand, within IAI46_20850 at 4414.675 kb on + strand, within IAI46_20850 at 4414.684 kb on + strand, within IAI46_20850 at 4414.684 kb on + strand, within IAI46_20850 at 4414.684 kb on + strand, within IAI46_20850 at 4414.684 kb on + strand, within IAI46_20850 at 4414.684 kb on + strand, within IAI46_20850 at 4414.684 kb on + strand, within IAI46_20850 at 4414.685 kb on - strand, within IAI46_20850 at 4414.685 kb on - strand, within IAI46_20850 at 4414.685 kb on - strand, within IAI46_20850 at 4414.693 kb on + strand, within IAI46_20850 at 4414.693 kb on + strand, within IAI46_20850 at 4414.754 kb on - strand at 4414.768 kb on + strand at 4414.768 kb on + strand at 4414.778 kb on - strand at 4415.056 kb on + strand at 4415.056 kb on + strand at 4415.056 kb on + strand at 4415.066 kb on + strand at 4415.067 kb on - strand at 4415.106 kb on + strand at 4415.106 kb on + strand at 4415.127 kb on + strand at 4415.127 kb on + strand at 4415.127 kb on + strand at 4415.128 kb on - strand at 4415.177 kb on - strand, within IAI46_20855 at 4415.203 kb on - strand, within IAI46_20855 at 4415.281 kb on - strand, within IAI46_20855 at 4415.411 kb on + strand, within IAI46_20855 at 4415.411 kb on + strand, within IAI46_20855 at 4415.411 kb on + strand, within IAI46_20855 at 4415.412 kb on - strand, within IAI46_20855 at 4415.464 kb on - strand at 4415.464 kb on - strand at 4415.464 kb on - strand at 4415.499 kb on + strand at 4415.499 kb on + strand at 4415.515 kb on + strand at 4415.553 kb on + strand at 4415.754 kb on + strand, within IAI46_20860 at 4415.754 kb on + strand, within IAI46_20860 at 4415.755 kb on - strand, within IAI46_20860 at 4415.755 kb on - strand, within IAI46_20860 at 4415.758 kb on + strand, within IAI46_20860 at 4415.759 kb on - strand, within IAI46_20860 at 4415.759 kb on - strand, within IAI46_20860 at 4415.759 kb on - strand, within IAI46_20860 at 4415.759 kb on - strand, within IAI46_20860 at 4415.759 kb on - strand, within IAI46_20860 at 4415.759 kb on - strand, within IAI46_20860 at 4415.761 kb on + strand, within IAI46_20860 at 4415.762 kb on - strand, within IAI46_20860 at 4415.927 kb on + strand, within IAI46_20860 at 4415.927 kb on + strand, within IAI46_20860 at 4415.928 kb on - strand, within IAI46_20860 at 4416.066 kb on + strand, within IAI46_20860 at 4416.067 kb on - strand, within IAI46_20860 at 4416.084 kb on + strand, within IAI46_20860 at 4416.158 kb on - strand, within IAI46_20860 at 4416.239 kb on + strand, within IAI46_20860 at 4416.312 kb on - strand, within IAI46_20860 at 4416.380 kb on + strand, within IAI46_20860 at 4416.481 kb on - strand, within IAI46_20860
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 4,414,271 + IAI46_20850 0.74 +0.3 4,414,272 - IAI46_20850 0.74 -1.0 4,414,272 - IAI46_20850 0.74 +0.2 4,414,334 - IAI46_20850 0.76 -0.0 4,414,334 - IAI46_20850 0.76 -0.6 4,414,482 + IAI46_20850 0.81 -0.1 4,414,482 + IAI46_20850 0.81 +0.1 4,414,482 + IAI46_20850 0.81 -0.8 4,414,482 + IAI46_20850 0.81 -0.4 4,414,483 - IAI46_20850 0.81 -0.1 4,414,483 - IAI46_20850 0.81 -0.4 4,414,483 - IAI46_20850 0.81 -0.8 4,414,483 - IAI46_20850 0.81 +0.2 4,414,662 + IAI46_20850 0.88 -0.1 4,414,675 + IAI46_20850 0.88 -0.6 4,414,684 + IAI46_20850 0.88 -0.2 4,414,684 + IAI46_20850 0.88 -1.2 4,414,684 + IAI46_20850 0.88 +0.4 4,414,684 + IAI46_20850 0.88 +0.7 4,414,684 + IAI46_20850 0.88 +0.7 4,414,684 + IAI46_20850 0.88 -0.3 4,414,685 - IAI46_20850 0.88 +0.0 4,414,685 - IAI46_20850 0.88 +0.1 4,414,685 - IAI46_20850 0.88 +0.5 4,414,693 + IAI46_20850 0.89 -0.6 4,414,693 + IAI46_20850 0.89 +0.3 4,414,754 - -1.7 4,414,768 + +0.8 4,414,768 + -0.0 4,414,778 - +1.3 4,415,056 + +0.2 4,415,056 + +1.0 4,415,056 + +0.8 4,415,066 + +0.4 4,415,067 - -0.4 4,415,106 + -0.6 4,415,106 + +0.4 4,415,127 + -0.1 4,415,127 + +0.8 4,415,127 + +0.0 4,415,128 - -1.6 4,415,177 - IAI46_20855 0.19 +0.1 4,415,203 - IAI46_20855 0.25 +0.2 4,415,281 - IAI46_20855 0.45 -0.1 4,415,411 + IAI46_20855 0.79 +0.1 4,415,411 + IAI46_20855 0.79 +0.4 4,415,411 + IAI46_20855 0.79 -0.7 4,415,412 - IAI46_20855 0.79 -0.0 4,415,464 - -0.2 4,415,464 - -0.2 4,415,464 - -0.4 4,415,499 + +0.4 4,415,499 + +1.0 4,415,515 + -1.9 4,415,553 + +0.4 4,415,754 + IAI46_20860 0.20 +0.0 4,415,754 + IAI46_20860 0.20 -0.4 4,415,755 - IAI46_20860 0.20 -0.7 4,415,755 - IAI46_20860 0.20 -1.7 4,415,758 + IAI46_20860 0.20 -1.0 4,415,759 - IAI46_20860 0.20 -0.6 4,415,759 - IAI46_20860 0.20 -0.5 4,415,759 - IAI46_20860 0.20 +0.5 4,415,759 - IAI46_20860 0.20 +0.5 4,415,759 - IAI46_20860 0.20 -0.1 4,415,759 - IAI46_20860 0.20 -1.1 4,415,761 + IAI46_20860 0.20 +0.1 4,415,762 - IAI46_20860 0.21 -0.3 4,415,927 + IAI46_20860 0.36 +0.3 4,415,927 + IAI46_20860 0.36 -0.9 4,415,928 - IAI46_20860 0.36 -0.2 4,416,066 + IAI46_20860 0.48 -0.2 4,416,067 - IAI46_20860 0.48 +0.5 4,416,084 + IAI46_20860 0.50 +0.6 4,416,158 - IAI46_20860 0.57 -0.2 4,416,239 + IAI46_20860 0.64 +0.1 4,416,312 - IAI46_20860 0.71 -0.8 4,416,380 + IAI46_20860 0.77 -2.0 4,416,481 - IAI46_20860 0.86 +0.7
Or see this region's nucleotide sequence