Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_18070 and IAI46_18075 overlap by 1 nucleotides IAI46_18075 and IAI46_18080 overlap by 4 nucleotides IAI46_18080 and IAI46_18085 overlap by 4 nucleotides
IAI46_18070: IAI46_18070 - c-type cytochrome biogenesis protein CcmI, at 3,809,566 to 3,810,777
_18070
IAI46_18075: IAI46_18075 - cytochrome c-type biogenesis protein CcmH, at 3,810,777 to 3,811,250
_18075
IAI46_18080: IAI46_18080 - DsbE family thiol:disulfide interchange protein, at 3,811,247 to 3,811,798
_18080
IAI46_18085: IAI46_18085 - heme lyase CcmF/NrfE family subunit, at 3,811,795 to 3,813,765
_18085
Position (kb)
3810
3811
3812 Strain fitness (log2 ratio)
-1
0
1 at 3809.780 kb on - strand, within IAI46_18070 at 3809.904 kb on + strand, within IAI46_18070 at 3809.998 kb on - strand, within IAI46_18070 at 3810.058 kb on + strand, within IAI46_18070 at 3810.075 kb on + strand, within IAI46_18070 at 3810.076 kb on - strand, within IAI46_18070 at 3810.207 kb on - strand, within IAI46_18070 at 3810.535 kb on - strand, within IAI46_18070 at 3810.697 kb on - strand at 3810.778 kb on + strand at 3810.898 kb on - strand, within IAI46_18075 at 3810.973 kb on + strand, within IAI46_18075 at 3810.973 kb on + strand, within IAI46_18075 at 3810.973 kb on + strand, within IAI46_18075 at 3810.973 kb on + strand, within IAI46_18075 at 3810.974 kb on - strand, within IAI46_18075 at 3811.004 kb on + strand, within IAI46_18075 at 3811.004 kb on + strand, within IAI46_18075 at 3811.004 kb on + strand, within IAI46_18075 at 3811.004 kb on + strand, within IAI46_18075 at 3811.004 kb on + strand, within IAI46_18075 at 3811.004 kb on + strand, within IAI46_18075 at 3811.005 kb on - strand, within IAI46_18075 at 3811.005 kb on - strand, within IAI46_18075 at 3811.005 kb on - strand, within IAI46_18075 at 3811.006 kb on + strand, within IAI46_18075 at 3811.006 kb on + strand, within IAI46_18075 at 3811.007 kb on - strand, within IAI46_18075 at 3811.007 kb on - strand, within IAI46_18075 at 3811.007 kb on - strand, within IAI46_18075 at 3811.007 kb on - strand, within IAI46_18075 at 3811.007 kb on - strand, within IAI46_18075 at 3811.007 kb on - strand, within IAI46_18075 at 3811.061 kb on + strand, within IAI46_18075 at 3811.088 kb on + strand, within IAI46_18075 at 3811.231 kb on - strand at 3811.231 kb on - strand at 3811.231 kb on - strand at 3811.273 kb on - strand at 3811.378 kb on - strand, within IAI46_18080 at 3811.483 kb on + strand, within IAI46_18080 at 3811.484 kb on - strand, within IAI46_18080 at 3811.485 kb on + strand, within IAI46_18080 at 3811.485 kb on + strand, within IAI46_18080 at 3811.485 kb on + strand, within IAI46_18080 at 3811.486 kb on - strand, within IAI46_18080 at 3811.526 kb on - strand, within IAI46_18080 at 3811.534 kb on - strand, within IAI46_18080 at 3811.534 kb on - strand, within IAI46_18080 at 3811.770 kb on - strand at 3811.789 kb on + strand at 3811.790 kb on - strand at 3811.887 kb on + strand at 3811.983 kb on - strand at 3812.046 kb on - strand, within IAI46_18085 at 3812.046 kb on - strand, within IAI46_18085 at 3812.046 kb on - strand, within IAI46_18085 at 3812.048 kb on + strand, within IAI46_18085 at 3812.172 kb on + strand, within IAI46_18085 at 3812.172 kb on + strand, within IAI46_18085 at 3812.173 kb on - strand, within IAI46_18085 at 3812.173 kb on - strand, within IAI46_18085 at 3812.225 kb on + strand, within IAI46_18085 at 3812.226 kb on - strand, within IAI46_18085
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,809,780 - IAI46_18070 0.18 -0.5 3,809,904 + IAI46_18070 0.28 -0.8 3,809,998 - IAI46_18070 0.36 -0.4 3,810,058 + IAI46_18070 0.41 +0.2 3,810,075 + IAI46_18070 0.42 +0.5 3,810,076 - IAI46_18070 0.42 +0.8 3,810,207 - IAI46_18070 0.53 +0.2 3,810,535 - IAI46_18070 0.80 -0.0 3,810,697 - +1.3 3,810,778 + -0.1 3,810,898 - IAI46_18075 0.26 +0.9 3,810,973 + IAI46_18075 0.41 -0.1 3,810,973 + IAI46_18075 0.41 +0.9 3,810,973 + IAI46_18075 0.41 +0.3 3,810,973 + IAI46_18075 0.41 +0.4 3,810,974 - IAI46_18075 0.42 -0.2 3,811,004 + IAI46_18075 0.48 +0.7 3,811,004 + IAI46_18075 0.48 +0.5 3,811,004 + IAI46_18075 0.48 -0.5 3,811,004 + IAI46_18075 0.48 -1.5 3,811,004 + IAI46_18075 0.48 +0.2 3,811,004 + IAI46_18075 0.48 -0.5 3,811,005 - IAI46_18075 0.48 -0.1 3,811,005 - IAI46_18075 0.48 +0.9 3,811,005 - IAI46_18075 0.48 +0.4 3,811,006 + IAI46_18075 0.48 +1.5 3,811,006 + IAI46_18075 0.48 -0.1 3,811,007 - IAI46_18075 0.49 -0.4 3,811,007 - IAI46_18075 0.49 -0.5 3,811,007 - IAI46_18075 0.49 -1.1 3,811,007 - IAI46_18075 0.49 +1.0 3,811,007 - IAI46_18075 0.49 +0.1 3,811,007 - IAI46_18075 0.49 +1.1 3,811,061 + IAI46_18075 0.60 -0.2 3,811,088 + IAI46_18075 0.66 -0.7 3,811,231 - +0.9 3,811,231 - +0.7 3,811,231 - -0.3 3,811,273 - +0.4 3,811,378 - IAI46_18080 0.24 +0.8 3,811,483 + IAI46_18080 0.43 +1.1 3,811,484 - IAI46_18080 0.43 +0.5 3,811,485 + IAI46_18080 0.43 +0.2 3,811,485 + IAI46_18080 0.43 -0.1 3,811,485 + IAI46_18080 0.43 +0.4 3,811,486 - IAI46_18080 0.43 +0.7 3,811,526 - IAI46_18080 0.51 -0.8 3,811,534 - IAI46_18080 0.52 +0.4 3,811,534 - IAI46_18080 0.52 -0.7 3,811,770 - +0.5 3,811,789 + -1.2 3,811,790 - +0.3 3,811,887 + +0.1 3,811,983 - +0.2 3,812,046 - IAI46_18085 0.13 +0.1 3,812,046 - IAI46_18085 0.13 +0.3 3,812,046 - IAI46_18085 0.13 +0.2 3,812,048 + IAI46_18085 0.13 +0.6 3,812,172 + IAI46_18085 0.19 +0.6 3,812,172 + IAI46_18085 0.19 -0.5 3,812,173 - IAI46_18085 0.19 -0.1 3,812,173 - IAI46_18085 0.19 +0.7 3,812,225 + IAI46_18085 0.22 +1.2 3,812,226 - IAI46_18085 0.22 -0.7
Or see this region's nucleotide sequence