Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17710 and IAI46_17715 are separated by 710 nucleotides IAI46_17715 and IAI46_17720 are separated by 858 nucleotides
IAI46_17710: IAI46_17710 - NADH-quinone oxidoreductase subunit A, at 3,732,898 to 3,733,335
_17710
IAI46_17715: IAI46_17715 - transcriptional regulator LrhA, at 3,734,046 to 3,734,981
_17715
IAI46_17720: IAI46_17720 - pyridoxal phosphate-dependent aminotransferase, at 3,735,840 to 3,737,054
_17720
Position (kb)
3734
3735 Strain fitness (log2 ratio)
-1
0
1 at 3733.091 kb on + strand, within IAI46_17710 at 3733.092 kb on - strand, within IAI46_17710 at 3733.158 kb on + strand, within IAI46_17710 at 3733.256 kb on - strand, within IAI46_17710 at 3733.336 kb on - strand at 3733.336 kb on - strand at 3733.336 kb on - strand at 3733.340 kb on + strand at 3733.347 kb on - strand at 3733.393 kb on + strand at 3733.394 kb on - strand at 3733.411 kb on + strand at 3733.423 kb on - strand at 3733.427 kb on - strand at 3733.496 kb on + strand at 3733.529 kb on - strand at 3733.555 kb on + strand at 3733.585 kb on + strand at 3733.620 kb on + strand at 3733.621 kb on - strand at 3733.625 kb on - strand at 3733.693 kb on + strand at 3733.693 kb on + strand at 3733.820 kb on + strand at 3733.820 kb on + strand at 3733.820 kb on + strand at 3733.838 kb on - strand at 3734.047 kb on + strand at 3734.048 kb on - strand at 3734.191 kb on + strand, within IAI46_17715 at 3734.191 kb on + strand, within IAI46_17715 at 3734.191 kb on + strand, within IAI46_17715 at 3734.192 kb on - strand, within IAI46_17715 at 3734.198 kb on + strand, within IAI46_17715 at 3734.294 kb on + strand, within IAI46_17715 at 3734.295 kb on - strand, within IAI46_17715 at 3734.332 kb on + strand, within IAI46_17715 at 3734.333 kb on - strand, within IAI46_17715 at 3734.447 kb on - strand, within IAI46_17715 at 3734.515 kb on - strand, within IAI46_17715 at 3734.515 kb on - strand, within IAI46_17715 at 3734.515 kb on - strand, within IAI46_17715 at 3734.515 kb on - strand, within IAI46_17715 at 3734.515 kb on - strand, within IAI46_17715 at 3734.515 kb on - strand, within IAI46_17715 at 3734.692 kb on - strand, within IAI46_17715 at 3734.769 kb on - strand, within IAI46_17715 at 3734.922 kb on + strand at 3734.923 kb on - strand at 3734.935 kb on - strand at 3735.008 kb on - strand at 3735.019 kb on + strand at 3735.019 kb on + strand at 3735.020 kb on - strand at 3735.020 kb on - strand at 3735.020 kb on - strand at 3735.036 kb on - strand at 3735.036 kb on - strand at 3735.082 kb on + strand at 3735.082 kb on + strand at 3735.082 kb on + strand at 3735.083 kb on - strand at 3735.083 kb on - strand at 3735.083 kb on - strand at 3735.116 kb on + strand at 3735.160 kb on - strand at 3735.175 kb on + strand at 3735.175 kb on + strand at 3735.377 kb on - strand at 3735.398 kb on + strand at 3735.402 kb on + strand at 3735.403 kb on - strand at 3735.407 kb on - strand at 3735.417 kb on + strand at 3735.434 kb on + strand at 3735.446 kb on - strand at 3735.446 kb on - strand at 3735.491 kb on + strand at 3735.499 kb on + strand at 3735.500 kb on - strand at 3735.500 kb on - strand at 3735.522 kb on - strand at 3735.590 kb on + strand at 3735.601 kb on + strand at 3735.601 kb on + strand at 3735.601 kb on + strand at 3735.609 kb on + strand at 3735.609 kb on + strand at 3735.609 kb on + strand at 3735.631 kb on + strand at 3735.683 kb on - strand at 3735.693 kb on - strand at 3735.773 kb on + strand at 3735.774 kb on - strand at 3735.774 kb on - strand at 3735.774 kb on - strand at 3735.803 kb on - strand at 3735.839 kb on + strand at 3735.883 kb on - strand at 3735.914 kb on + strand at 3735.939 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,733,091 + IAI46_17710 0.44 -0.0 3,733,092 - IAI46_17710 0.44 -0.2 3,733,158 + IAI46_17710 0.59 -1.0 3,733,256 - IAI46_17710 0.82 +0.5 3,733,336 - +1.0 3,733,336 - +0.9 3,733,336 - +0.1 3,733,340 + +0.6 3,733,347 - -1.1 3,733,393 + +1.4 3,733,394 - +0.1 3,733,411 + -0.5 3,733,423 - -0.2 3,733,427 - +0.7 3,733,496 + +0.1 3,733,529 - -0.0 3,733,555 + -0.3 3,733,585 + +0.8 3,733,620 + -0.5 3,733,621 - -0.3 3,733,625 - -0.0 3,733,693 + -0.4 3,733,693 + -0.2 3,733,820 + -0.6 3,733,820 + +0.3 3,733,820 + +0.4 3,733,838 - -1.1 3,734,047 + +0.5 3,734,048 - -0.2 3,734,191 + IAI46_17715 0.15 +0.0 3,734,191 + IAI46_17715 0.15 -1.3 3,734,191 + IAI46_17715 0.15 -0.8 3,734,192 - IAI46_17715 0.16 -0.3 3,734,198 + IAI46_17715 0.16 -0.2 3,734,294 + IAI46_17715 0.26 -0.2 3,734,295 - IAI46_17715 0.27 +0.9 3,734,332 + IAI46_17715 0.31 +0.2 3,734,333 - IAI46_17715 0.31 -0.6 3,734,447 - IAI46_17715 0.43 -0.4 3,734,515 - IAI46_17715 0.50 -0.3 3,734,515 - IAI46_17715 0.50 -0.1 3,734,515 - IAI46_17715 0.50 +0.8 3,734,515 - IAI46_17715 0.50 -0.0 3,734,515 - IAI46_17715 0.50 +0.6 3,734,515 - IAI46_17715 0.50 +0.4 3,734,692 - IAI46_17715 0.69 -0.2 3,734,769 - IAI46_17715 0.77 +0.1 3,734,922 + +0.1 3,734,923 - -0.2 3,734,935 - +1.4 3,735,008 - +0.7 3,735,019 + -0.9 3,735,019 + +0.9 3,735,020 - +0.7 3,735,020 - +1.0 3,735,020 - +0.7 3,735,036 - +0.2 3,735,036 - -0.7 3,735,082 + -0.9 3,735,082 + +0.2 3,735,082 + -0.3 3,735,083 - -0.8 3,735,083 - +0.4 3,735,083 - +0.5 3,735,116 + -0.2 3,735,160 - +0.4 3,735,175 + +1.0 3,735,175 + +0.4 3,735,377 - +0.5 3,735,398 + +0.3 3,735,402 + +0.4 3,735,403 - +1.0 3,735,407 - +0.7 3,735,417 + -0.2 3,735,434 + +0.3 3,735,446 - +0.7 3,735,446 - -0.5 3,735,491 + +0.6 3,735,499 + -0.3 3,735,500 - +0.5 3,735,500 - +0.2 3,735,522 - -0.2 3,735,590 + +0.5 3,735,601 + +1.4 3,735,601 + -0.9 3,735,601 + +0.9 3,735,609 + +0.5 3,735,609 + -0.1 3,735,609 + +0.3 3,735,631 + +0.7 3,735,683 - +0.8 3,735,693 - -0.5 3,735,773 + -0.6 3,735,774 - +0.4 3,735,774 - -0.0 3,735,774 - +0.8 3,735,803 - +0.7 3,735,839 + -0.3 3,735,883 - +0.3 3,735,914 + +1.7 3,735,939 - +0.2
Or see this region's nucleotide sequence