Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_17415 and IAI46_17420 are separated by 112 nucleotides IAI46_17420 and IAI46_17425 overlap by 7 nucleotides IAI46_17425 and IAI46_17430 are separated by 154 nucleotides
IAI46_17415: IAI46_17415 - nuclear transport factor 2 family protein, at 3,656,623 to 3,657,090
_17415
IAI46_17420: IAI46_17420 - TetR/AcrR family transcriptional regulator, at 3,657,203 to 3,657,781
_17420
IAI46_17425: IAI46_17425 - VOC family protein, at 3,657,775 to 3,658,191
_17425
IAI46_17430: IAI46_17430 - porin OmpC, at 3,658,346 to 3,659,476
_17430
Position (kb)
3657
3658
3659 Strain fitness (log2 ratio)
-2
-1
0
1 at 3657.090 kb on + strand at 3657.090 kb on + strand at 3657.090 kb on + strand at 3657.091 kb on - strand at 3657.091 kb on - strand at 3657.091 kb on - strand at 3657.096 kb on - strand at 3657.139 kb on + strand at 3657.140 kb on - strand at 3657.197 kb on - strand at 3657.242 kb on - strand at 3657.282 kb on + strand, within IAI46_17420 at 3657.282 kb on + strand, within IAI46_17420 at 3657.342 kb on - strand, within IAI46_17420 at 3657.437 kb on + strand, within IAI46_17420 at 3657.437 kb on + strand, within IAI46_17420 at 3657.437 kb on + strand, within IAI46_17420 at 3657.462 kb on + strand, within IAI46_17420 at 3657.462 kb on + strand, within IAI46_17420 at 3657.462 kb on + strand, within IAI46_17420 at 3657.462 kb on + strand, within IAI46_17420 at 3657.463 kb on - strand, within IAI46_17420 at 3657.532 kb on + strand, within IAI46_17420 at 3657.621 kb on - strand, within IAI46_17420 at 3657.765 kb on + strand at 3657.779 kb on + strand at 3657.839 kb on + strand, within IAI46_17425 at 3657.840 kb on - strand, within IAI46_17425 at 3657.880 kb on + strand, within IAI46_17425 at 3657.880 kb on + strand, within IAI46_17425 at 3657.880 kb on + strand, within IAI46_17425 at 3657.881 kb on - strand, within IAI46_17425 at 3657.985 kb on - strand, within IAI46_17425 at 3657.986 kb on + strand, within IAI46_17425 at 3657.986 kb on + strand, within IAI46_17425 at 3657.986 kb on + strand, within IAI46_17425 at 3657.987 kb on - strand, within IAI46_17425 at 3657.987 kb on - strand, within IAI46_17425 at 3657.987 kb on - strand, within IAI46_17425 at 3658.119 kb on - strand, within IAI46_17425 at 3658.119 kb on - strand, within IAI46_17425 at 3658.152 kb on - strand at 3658.152 kb on - strand at 3658.157 kb on - strand at 3658.178 kb on - strand at 3658.195 kb on - strand at 3658.195 kb on - strand at 3658.217 kb on + strand at 3658.218 kb on - strand at 3658.231 kb on - strand at 3658.347 kb on + strand at 3658.347 kb on + strand at 3658.348 kb on - strand at 3658.450 kb on - strand at 3658.450 kb on - strand at 3658.450 kb on - strand at 3658.450 kb on - strand at 3658.476 kb on + strand, within IAI46_17430 at 3658.477 kb on - strand, within IAI46_17430 at 3658.477 kb on - strand, within IAI46_17430 at 3658.477 kb on - strand, within IAI46_17430 at 3658.477 kb on - strand, within IAI46_17430 at 3658.572 kb on + strand, within IAI46_17430 at 3658.608 kb on + strand, within IAI46_17430 at 3658.627 kb on + strand, within IAI46_17430 at 3658.628 kb on - strand, within IAI46_17430 at 3658.653 kb on + strand, within IAI46_17430 at 3658.654 kb on - strand, within IAI46_17430 at 3658.669 kb on + strand, within IAI46_17430 at 3658.670 kb on - strand, within IAI46_17430 at 3658.692 kb on + strand, within IAI46_17430 at 3658.692 kb on + strand, within IAI46_17430 at 3658.693 kb on - strand, within IAI46_17430 at 3658.719 kb on + strand, within IAI46_17430 at 3658.720 kb on - strand, within IAI46_17430 at 3658.720 kb on - strand, within IAI46_17430 at 3658.737 kb on + strand, within IAI46_17430 at 3658.738 kb on - strand, within IAI46_17430 at 3658.794 kb on + strand, within IAI46_17430 at 3658.794 kb on + strand, within IAI46_17430 at 3658.795 kb on - strand, within IAI46_17430 at 3658.795 kb on - strand, within IAI46_17430 at 3658.795 kb on - strand, within IAI46_17430 at 3658.822 kb on + strand, within IAI46_17430 at 3658.875 kb on + strand, within IAI46_17430 at 3658.875 kb on + strand, within IAI46_17430 at 3658.933 kb on + strand, within IAI46_17430 at 3658.934 kb on - strand, within IAI46_17430 at 3658.934 kb on - strand, within IAI46_17430 at 3658.958 kb on - strand, within IAI46_17430 at 3658.966 kb on - strand, within IAI46_17430 at 3659.014 kb on + strand, within IAI46_17430 at 3659.103 kb on + strand, within IAI46_17430 at 3659.104 kb on - strand, within IAI46_17430 at 3659.118 kb on + strand, within IAI46_17430
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,657,090 + -0.0 3,657,090 + -1.7 3,657,090 + +0.2 3,657,091 - +0.8 3,657,091 - +0.2 3,657,091 - -0.2 3,657,096 - -1.0 3,657,139 + +1.2 3,657,140 - +0.7 3,657,197 - +1.1 3,657,242 - +0.2 3,657,282 + IAI46_17420 0.14 -0.0 3,657,282 + IAI46_17420 0.14 +0.2 3,657,342 - IAI46_17420 0.24 -0.8 3,657,437 + IAI46_17420 0.40 +1.3 3,657,437 + IAI46_17420 0.40 -0.2 3,657,437 + IAI46_17420 0.40 +0.4 3,657,462 + IAI46_17420 0.45 -0.2 3,657,462 + IAI46_17420 0.45 -0.2 3,657,462 + IAI46_17420 0.45 +0.6 3,657,462 + IAI46_17420 0.45 -0.1 3,657,463 - IAI46_17420 0.45 +0.9 3,657,532 + IAI46_17420 0.57 +0.4 3,657,621 - IAI46_17420 0.72 +0.5 3,657,765 + +0.8 3,657,779 + +0.1 3,657,839 + IAI46_17425 0.15 -0.1 3,657,840 - IAI46_17425 0.16 +0.5 3,657,880 + IAI46_17425 0.25 -0.7 3,657,880 + IAI46_17425 0.25 -0.7 3,657,880 + IAI46_17425 0.25 +1.5 3,657,881 - IAI46_17425 0.25 +0.3 3,657,985 - IAI46_17425 0.50 +0.4 3,657,986 + IAI46_17425 0.51 -0.6 3,657,986 + IAI46_17425 0.51 +0.4 3,657,986 + IAI46_17425 0.51 +1.4 3,657,987 - IAI46_17425 0.51 +0.7 3,657,987 - IAI46_17425 0.51 +0.3 3,657,987 - IAI46_17425 0.51 -0.4 3,658,119 - IAI46_17425 0.82 -1.7 3,658,119 - IAI46_17425 0.82 -0.1 3,658,152 - +0.3 3,658,152 - -0.4 3,658,157 - -0.3 3,658,178 - -0.3 3,658,195 - +0.3 3,658,195 - +0.1 3,658,217 + -0.4 3,658,218 - +0.9 3,658,231 - +0.2 3,658,347 + -1.0 3,658,347 + -0.0 3,658,348 - +0.1 3,658,450 - -0.7 3,658,450 - +0.7 3,658,450 - -1.0 3,658,450 - -1.8 3,658,476 + IAI46_17430 0.11 +0.1 3,658,477 - IAI46_17430 0.12 +0.9 3,658,477 - IAI46_17430 0.12 +0.5 3,658,477 - IAI46_17430 0.12 -0.8 3,658,477 - IAI46_17430 0.12 +1.1 3,658,572 + IAI46_17430 0.20 +0.4 3,658,608 + IAI46_17430 0.23 -0.0 3,658,627 + IAI46_17430 0.25 -0.9 3,658,628 - IAI46_17430 0.25 +0.5 3,658,653 + IAI46_17430 0.27 +0.2 3,658,654 - IAI46_17430 0.27 +0.1 3,658,669 + IAI46_17430 0.29 +0.2 3,658,670 - IAI46_17430 0.29 +0.3 3,658,692 + IAI46_17430 0.31 +1.7 3,658,692 + IAI46_17430 0.31 -0.3 3,658,693 - IAI46_17430 0.31 -0.4 3,658,719 + IAI46_17430 0.33 +0.7 3,658,720 - IAI46_17430 0.33 +0.5 3,658,720 - IAI46_17430 0.33 -0.2 3,658,737 + IAI46_17430 0.35 -0.6 3,658,738 - IAI46_17430 0.35 -1.3 3,658,794 + IAI46_17430 0.40 +0.1 3,658,794 + IAI46_17430 0.40 -0.2 3,658,795 - IAI46_17430 0.40 -0.4 3,658,795 - IAI46_17430 0.40 -1.3 3,658,795 - IAI46_17430 0.40 -0.9 3,658,822 + IAI46_17430 0.42 +0.7 3,658,875 + IAI46_17430 0.47 +0.1 3,658,875 + IAI46_17430 0.47 -1.7 3,658,933 + IAI46_17430 0.52 +1.3 3,658,934 - IAI46_17430 0.52 -1.8 3,658,934 - IAI46_17430 0.52 -0.4 3,658,958 - IAI46_17430 0.54 +0.1 3,658,966 - IAI46_17430 0.55 +0.4 3,659,014 + IAI46_17430 0.59 -0.3 3,659,103 + IAI46_17430 0.67 +0.3 3,659,104 - IAI46_17430 0.67 +0.2 3,659,118 + IAI46_17430 0.68 -0.3
Or see this region's nucleotide sequence