Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15840 and IAI46_15845 overlap by 4 nucleotides IAI46_15845 and IAI46_15850 overlap by 8 nucleotides IAI46_15850 and IAI46_15855 overlap by 1 nucleotides
IAI46_15840: IAI46_15840 - flagellar M-ring protein FliF, at 3,327,046 to 3,328,746
_15840
IAI46_15845: IAI46_15845 - flagellar motor switch protein FliG, at 3,328,743 to 3,329,735
_15845
IAI46_15850: IAI46_15850 - flagellar assembly protein FliH, at 3,329,728 to 3,330,432
_15850
IAI46_15855: IAI46_15855 - flagellum-specific ATP synthase FliI, at 3,330,432 to 3,331,793
_15855
Position (kb)
3328
3329
3330 Strain fitness (log2 ratio)
-2
-1
0
1 at 3327.756 kb on + strand, within IAI46_15840 at 3327.756 kb on + strand, within IAI46_15840 at 3327.756 kb on + strand, within IAI46_15840 at 3327.757 kb on - strand, within IAI46_15840 at 3327.757 kb on - strand, within IAI46_15840 at 3327.757 kb on - strand, within IAI46_15840 at 3327.757 kb on - strand, within IAI46_15840 at 3327.761 kb on - strand, within IAI46_15840 at 3327.832 kb on - strand, within IAI46_15840 at 3327.895 kb on + strand, within IAI46_15840 at 3327.904 kb on - strand, within IAI46_15840 at 3327.919 kb on - strand, within IAI46_15840 at 3327.919 kb on - strand, within IAI46_15840 at 3328.163 kb on - strand, within IAI46_15840 at 3328.163 kb on - strand, within IAI46_15840 at 3328.198 kb on - strand, within IAI46_15840 at 3328.243 kb on + strand, within IAI46_15840 at 3328.734 kb on + strand at 3328.735 kb on - strand at 3328.742 kb on + strand at 3328.742 kb on + strand at 3328.742 kb on + strand at 3328.742 kb on + strand at 3328.743 kb on - strand at 3328.743 kb on - strand at 3328.743 kb on - strand at 3328.935 kb on + strand, within IAI46_15845 at 3328.936 kb on - strand, within IAI46_15845 at 3329.400 kb on + strand, within IAI46_15845 at 3329.591 kb on + strand, within IAI46_15845 at 3329.592 kb on - strand, within IAI46_15845 at 3329.660 kb on + strand at 3329.727 kb on + strand at 3329.727 kb on + strand at 3329.727 kb on + strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.728 kb on - strand at 3329.745 kb on + strand at 3329.745 kb on + strand at 3329.745 kb on + strand at 3329.746 kb on - strand at 3329.746 kb on - strand at 3329.780 kb on + strand at 3330.253 kb on + strand, within IAI46_15850 at 3330.253 kb on + strand, within IAI46_15850 at 3330.430 kb on + strand at 3330.562 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,327,756 + IAI46_15840 0.42 +0.6 3,327,756 + IAI46_15840 0.42 +0.4 3,327,756 + IAI46_15840 0.42 +1.0 3,327,757 - IAI46_15840 0.42 +0.2 3,327,757 - IAI46_15840 0.42 +0.2 3,327,757 - IAI46_15840 0.42 +0.7 3,327,757 - IAI46_15840 0.42 +0.1 3,327,761 - IAI46_15840 0.42 +0.1 3,327,832 - IAI46_15840 0.46 +0.3 3,327,895 + IAI46_15840 0.50 -1.9 3,327,904 - IAI46_15840 0.50 +0.1 3,327,919 - IAI46_15840 0.51 +1.1 3,327,919 - IAI46_15840 0.51 -0.4 3,328,163 - IAI46_15840 0.66 +0.4 3,328,163 - IAI46_15840 0.66 +0.5 3,328,198 - IAI46_15840 0.68 +0.2 3,328,243 + IAI46_15840 0.70 -0.1 3,328,734 + +0.4 3,328,735 - -0.3 3,328,742 + -0.3 3,328,742 + +0.7 3,328,742 + +0.3 3,328,742 + +0.9 3,328,743 - +1.0 3,328,743 - -0.0 3,328,743 - +0.2 3,328,935 + IAI46_15845 0.19 -0.1 3,328,936 - IAI46_15845 0.19 +0.9 3,329,400 + IAI46_15845 0.66 -0.9 3,329,591 + IAI46_15845 0.85 -0.3 3,329,592 - IAI46_15845 0.85 -0.1 3,329,660 + -0.3 3,329,727 + -0.4 3,329,727 + -0.5 3,329,727 + +0.2 3,329,728 - +0.9 3,329,728 - +0.2 3,329,728 - +0.1 3,329,728 - +1.3 3,329,728 - -1.0 3,329,728 - -1.9 3,329,728 - +1.0 3,329,745 + +0.4 3,329,745 + +0.5 3,329,745 + +0.8 3,329,746 - +0.9 3,329,746 - -0.6 3,329,780 + -0.1 3,330,253 + IAI46_15850 0.74 -0.1 3,330,253 + IAI46_15850 0.74 -0.7 3,330,430 + -1.5 3,330,562 + -0.5
Or see this region's nucleotide sequence