Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15795 and IAI46_15800 are separated by 27 nucleotides IAI46_15800 and IAI46_15805 overlap by 1 nucleotides IAI46_15805 and IAI46_15810 are separated by 311 nucleotides
IAI46_15795: IAI46_15795 - flagellar filament capping protein FliD, at 3,317,902 to 3,319,299
_15795
IAI46_15800: IAI46_15800 - flagellar export chaperone FliS, at 3,319,327 to 3,319,737
_15800
IAI46_15805: IAI46_15805 - flagella biosynthesis regulatory protein FliT, at 3,319,737 to 3,320,105
_15805
IAI46_15810: IAI46_15810 - helix-turn-helix transcriptional regulator, at 3,320,417 to 3,321,283
_15810
Position (kb)
3319
3320
3321 Strain fitness (log2 ratio)
-2
-1
0
1 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.757 kb on + strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.758 kb on - strand, within IAI46_15795 at 3318.759 kb on + strand, within IAI46_15795 at 3318.760 kb on - strand, within IAI46_15795 at 3318.780 kb on + strand, within IAI46_15795 at 3318.796 kb on + strand, within IAI46_15795 at 3318.855 kb on + strand, within IAI46_15795 at 3318.886 kb on - strand, within IAI46_15795 at 3319.147 kb on - strand, within IAI46_15795 at 3319.147 kb on - strand, within IAI46_15795 at 3319.207 kb on - strand at 3319.217 kb on - strand at 3319.219 kb on - strand at 3319.297 kb on + strand at 3319.330 kb on + strand at 3319.330 kb on + strand at 3319.330 kb on + strand at 3319.330 kb on + strand at 3319.331 kb on - strand at 3319.331 kb on - strand at 3319.331 kb on - strand at 3319.354 kb on + strand at 3319.516 kb on - strand, within IAI46_15800 at 3319.592 kb on - strand, within IAI46_15800 at 3319.592 kb on - strand, within IAI46_15800 at 3319.597 kb on + strand, within IAI46_15800 at 3319.597 kb on + strand, within IAI46_15800 at 3319.598 kb on - strand, within IAI46_15800 at 3319.598 kb on - strand, within IAI46_15800 at 3319.598 kb on - strand, within IAI46_15800 at 3319.599 kb on + strand, within IAI46_15800 at 3319.600 kb on - strand, within IAI46_15800 at 3319.600 kb on - strand, within IAI46_15800 at 3319.678 kb on - strand, within IAI46_15800 at 3319.678 kb on - strand, within IAI46_15800 at 3319.711 kb on + strand at 3319.712 kb on - strand at 3319.735 kb on + strand at 3319.779 kb on + strand, within IAI46_15805 at 3319.779 kb on + strand, within IAI46_15805 at 3319.779 kb on + strand, within IAI46_15805 at 3319.780 kb on - strand, within IAI46_15805 at 3319.782 kb on - strand, within IAI46_15805 at 3319.854 kb on + strand, within IAI46_15805 at 3319.854 kb on + strand, within IAI46_15805 at 3319.934 kb on + strand, within IAI46_15805 at 3320.052 kb on + strand, within IAI46_15805 at 3320.134 kb on + strand at 3320.139 kb on - strand at 3320.151 kb on + strand at 3320.152 kb on - strand at 3320.152 kb on - strand at 3320.155 kb on - strand at 3320.176 kb on - strand at 3320.198 kb on - strand at 3320.264 kb on - strand at 3320.317 kb on - strand at 3320.378 kb on + strand at 3320.391 kb on - strand at 3320.394 kb on + strand at 3320.394 kb on + strand at 3320.395 kb on - strand at 3320.395 kb on - strand at 3320.395 kb on - strand at 3320.522 kb on + strand, within IAI46_15810 at 3320.523 kb on - strand, within IAI46_15810 at 3320.754 kb on + strand, within IAI46_15810 at 3320.755 kb on - strand, within IAI46_15810 at 3320.865 kb on + strand, within IAI46_15810 at 3320.931 kb on + strand, within IAI46_15810 at 3320.931 kb on + strand, within IAI46_15810 at 3321.052 kb on + strand, within IAI46_15810 at 3321.063 kb on + strand, within IAI46_15810
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,318,757 + IAI46_15795 0.61 +0.8 3,318,757 + IAI46_15795 0.61 -1.0 3,318,757 + IAI46_15795 0.61 +0.3 3,318,757 + IAI46_15795 0.61 +0.5 3,318,757 + IAI46_15795 0.61 -0.3 3,318,757 + IAI46_15795 0.61 +0.3 3,318,758 - IAI46_15795 0.61 -1.8 3,318,758 - IAI46_15795 0.61 -1.5 3,318,758 - IAI46_15795 0.61 -0.3 3,318,758 - IAI46_15795 0.61 +0.4 3,318,758 - IAI46_15795 0.61 -0.2 3,318,759 + IAI46_15795 0.61 +1.4 3,318,760 - IAI46_15795 0.61 +0.6 3,318,780 + IAI46_15795 0.63 +1.2 3,318,796 + IAI46_15795 0.64 -0.5 3,318,855 + IAI46_15795 0.68 -0.3 3,318,886 - IAI46_15795 0.70 +0.2 3,319,147 - IAI46_15795 0.89 -1.8 3,319,147 - IAI46_15795 0.89 +0.4 3,319,207 - -0.2 3,319,217 - +0.3 3,319,219 - -0.9 3,319,297 + -0.0 3,319,330 + -0.1 3,319,330 + -0.3 3,319,330 + +0.7 3,319,330 + -0.2 3,319,331 - -0.9 3,319,331 - -0.5 3,319,331 - -1.0 3,319,354 + -0.2 3,319,516 - IAI46_15800 0.46 +0.2 3,319,592 - IAI46_15800 0.64 -0.1 3,319,592 - IAI46_15800 0.64 -0.2 3,319,597 + IAI46_15800 0.66 +0.2 3,319,597 + IAI46_15800 0.66 -1.2 3,319,598 - IAI46_15800 0.66 +0.6 3,319,598 - IAI46_15800 0.66 -0.9 3,319,598 - IAI46_15800 0.66 -0.2 3,319,599 + IAI46_15800 0.66 +0.4 3,319,600 - IAI46_15800 0.66 +0.5 3,319,600 - IAI46_15800 0.66 -1.2 3,319,678 - IAI46_15800 0.85 -0.3 3,319,678 - IAI46_15800 0.85 -0.4 3,319,711 + -2.2 3,319,712 - -2.2 3,319,735 + +0.5 3,319,779 + IAI46_15805 0.11 -0.2 3,319,779 + IAI46_15805 0.11 +0.2 3,319,779 + IAI46_15805 0.11 -0.4 3,319,780 - IAI46_15805 0.12 -0.9 3,319,782 - IAI46_15805 0.12 +0.0 3,319,854 + IAI46_15805 0.32 +0.3 3,319,854 + IAI46_15805 0.32 +0.0 3,319,934 + IAI46_15805 0.53 -0.4 3,320,052 + IAI46_15805 0.85 +0.1 3,320,134 + -0.5 3,320,139 - -1.4 3,320,151 + +1.2 3,320,152 - -0.5 3,320,152 - +0.7 3,320,155 - +1.3 3,320,176 - +0.1 3,320,198 - -0.1 3,320,264 - -0.2 3,320,317 - +0.5 3,320,378 + +0.0 3,320,391 - +0.7 3,320,394 + -0.3 3,320,394 + -1.6 3,320,395 - -1.4 3,320,395 - +0.1 3,320,395 - -0.9 3,320,522 + IAI46_15810 0.12 -0.9 3,320,523 - IAI46_15810 0.12 +0.4 3,320,754 + IAI46_15810 0.39 -0.3 3,320,755 - IAI46_15810 0.39 +0.8 3,320,865 + IAI46_15810 0.52 -0.9 3,320,931 + IAI46_15810 0.59 +0.3 3,320,931 + IAI46_15810 0.59 -1.1 3,321,052 + IAI46_15810 0.73 -0.1 3,321,063 + IAI46_15810 0.75 +0.4
Or see this region's nucleotide sequence