Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_15745 and IAI46_15750 are separated by 166 nucleotides IAI46_15750 and IAI46_15755 are separated by 29 nucleotides IAI46_15755 and IAI46_15760 are separated by 31 nucleotides IAI46_15760 and IAI46_15765 are separated by 3 nucleotides
IAI46_15745: IAI46_15745 - trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase, at 3,306,659 to 3,310,630
_15745
IAI46_15750: IAI46_15750 - type II toxin-antitoxin system HicA family toxin, at 3,310,797 to 3,310,979
_15750
IAI46_15755: IAI46_15755 - type II toxin-antitoxin system HicB family antitoxin, at 3,311,009 to 3,311,422
_15755
IAI46_15760: IAI46_15760 - L-cystine ABC transporter ATP-binding protein YecC, at 3,311,454 to 3,312,206
_15760
IAI46_15765: IAI46_15765 - cystine ABC transporter permease, at 3,312,210 to 3,312,872
_15765
Position (kb)
3311
3312 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3310.182 kb on + strand, within IAI46_15745 at 3310.183 kb on - strand, within IAI46_15745 at 3310.220 kb on + strand, within IAI46_15745 at 3310.220 kb on + strand, within IAI46_15745 at 3310.221 kb on - strand, within IAI46_15745 at 3310.221 kb on - strand, within IAI46_15745 at 3310.221 kb on - strand, within IAI46_15745 at 3310.221 kb on - strand, within IAI46_15745 at 3310.439 kb on + strand at 3310.727 kb on + strand at 3310.727 kb on + strand at 3310.825 kb on + strand, within IAI46_15750 at 3310.825 kb on + strand, within IAI46_15750 at 3310.826 kb on - strand, within IAI46_15750 at 3310.977 kb on + strand at 3311.258 kb on - strand, within IAI46_15755 at 3311.260 kb on + strand, within IAI46_15755 at 3311.260 kb on + strand, within IAI46_15755 at 3311.260 kb on + strand, within IAI46_15755 at 3311.260 kb on + strand, within IAI46_15755 at 3311.261 kb on - strand, within IAI46_15755 at 3311.269 kb on + strand, within IAI46_15755 at 3311.269 kb on + strand, within IAI46_15755 at 3311.293 kb on + strand, within IAI46_15755 at 3311.302 kb on + strand, within IAI46_15755 at 3311.302 kb on + strand, within IAI46_15755 at 3311.303 kb on - strand, within IAI46_15755 at 3311.303 kb on - strand, within IAI46_15755 at 3311.331 kb on + strand, within IAI46_15755 at 3311.332 kb on - strand, within IAI46_15755 at 3311.402 kb on + strand at 3311.455 kb on + strand at 3311.456 kb on - strand at 3311.489 kb on + strand at 3311.490 kb on - strand at 3311.544 kb on - strand, within IAI46_15760 at 3311.647 kb on - strand, within IAI46_15760 at 3311.647 kb on - strand, within IAI46_15760 at 3311.647 kb on - strand, within IAI46_15760 at 3311.647 kb on - strand, within IAI46_15760 at 3312.115 kb on - strand, within IAI46_15760 at 3312.308 kb on - strand, within IAI46_15765 at 3312.308 kb on - strand, within IAI46_15765 at 3312.308 kb on - strand, within IAI46_15765
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,310,182 + IAI46_15745 0.89 -0.4 3,310,183 - IAI46_15745 0.89 -0.7 3,310,220 + IAI46_15745 0.90 -1.6 3,310,220 + IAI46_15745 0.90 +0.5 3,310,221 - IAI46_15745 0.90 +0.2 3,310,221 - IAI46_15745 0.90 -0.5 3,310,221 - IAI46_15745 0.90 +0.4 3,310,221 - IAI46_15745 0.90 -0.0 3,310,439 + +0.0 3,310,727 + +0.2 3,310,727 + -0.6 3,310,825 + IAI46_15750 0.15 +0.3 3,310,825 + IAI46_15750 0.15 -0.0 3,310,826 - IAI46_15750 0.16 +0.5 3,310,977 + +0.4 3,311,258 - IAI46_15755 0.60 +0.2 3,311,260 + IAI46_15755 0.61 -0.1 3,311,260 + IAI46_15755 0.61 -0.2 3,311,260 + IAI46_15755 0.61 -0.9 3,311,260 + IAI46_15755 0.61 +0.8 3,311,261 - IAI46_15755 0.61 -3.1 3,311,269 + IAI46_15755 0.63 -0.2 3,311,269 + IAI46_15755 0.63 -0.0 3,311,293 + IAI46_15755 0.69 -0.0 3,311,302 + IAI46_15755 0.71 -0.1 3,311,302 + IAI46_15755 0.71 +0.5 3,311,303 - IAI46_15755 0.71 +1.0 3,311,303 - IAI46_15755 0.71 -0.5 3,311,331 + IAI46_15755 0.78 -0.7 3,311,332 - IAI46_15755 0.78 -0.8 3,311,402 + -0.1 3,311,455 + -0.6 3,311,456 - +0.6 3,311,489 + -1.4 3,311,490 - +1.2 3,311,544 - IAI46_15760 0.12 -0.1 3,311,647 - IAI46_15760 0.26 -1.0 3,311,647 - IAI46_15760 0.26 +0.5 3,311,647 - IAI46_15760 0.26 +0.2 3,311,647 - IAI46_15760 0.26 -0.3 3,312,115 - IAI46_15760 0.88 +1.2 3,312,308 - IAI46_15765 0.15 +0.1 3,312,308 - IAI46_15765 0.15 -0.1 3,312,308 - IAI46_15765 0.15 +0.1
Or see this region's nucleotide sequence