Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_14265 and IAI46_14270 are separated by 158 nucleotides IAI46_14270 and IAI46_14275 are separated by 96 nucleotides IAI46_14275 and IAI46_14285 are separated by 322 nucleotides IAI46_14285 and IAI46_14290 are separated by 102 nucleotides IAI46_14290 and IAI46_14295 are separated by 45 nucleotides
IAI46_14265: IAI46_14265 - formyltetrahydrofolate deformylase, at 3,030,102 to 3,030,950
_14265
IAI46_14270: IAI46_14270 - tRNA-Tyr, at 3,031,109 to 3,031,193
_14270
IAI46_14275: IAI46_14275 - tRNA-Tyr, at 3,031,290 to 3,031,374
_14275
IAI46_14285: IAI46_14285 - TIGR00730 family Rossman fold protein, at 3,031,697 to 3,032,269
_14285
IAI46_14290: IAI46_14290 - exodeoxyribonuclease III, at 3,032,372 to 3,033,178
_14290
IAI46_14295: IAI46_14295 - pyrimidine (deoxy)nucleoside triphosphate diphosphatase, at 3,033,224 to 3,033,625
_14295
Position (kb)
3031
3032
3033 Strain fitness (log2 ratio)
-2
-1
0
1 at 3030.712 kb on - strand, within IAI46_14265 at 3030.762 kb on + strand, within IAI46_14265 at 3030.763 kb on - strand, within IAI46_14265 at 3030.828 kb on + strand, within IAI46_14265 at 3030.828 kb on + strand, within IAI46_14265 at 3030.829 kb on - strand, within IAI46_14265 at 3030.843 kb on - strand, within IAI46_14265 at 3030.895 kb on - strand at 3030.916 kb on + strand at 3030.916 kb on + strand at 3030.916 kb on + strand at 3030.922 kb on + strand at 3030.923 kb on - strand at 3030.923 kb on - strand at 3030.923 kb on - strand at 3030.949 kb on - strand at 3031.060 kb on + strand at 3031.061 kb on - strand at 3031.284 kb on + strand at 3031.381 kb on + strand at 3031.381 kb on + strand at 3031.381 kb on + strand at 3031.381 kb on + strand at 3031.526 kb on + strand at 3031.553 kb on - strand at 3031.553 kb on - strand at 3031.553 kb on - strand at 3031.600 kb on - strand at 3031.657 kb on + strand at 3032.023 kb on - strand, within IAI46_14285 at 3032.114 kb on + strand, within IAI46_14285 at 3032.162 kb on - strand, within IAI46_14285 at 3032.174 kb on + strand, within IAI46_14285 at 3032.389 kb on + strand at 3032.491 kb on + strand, within IAI46_14290 at 3032.492 kb on - strand, within IAI46_14290 at 3032.519 kb on + strand, within IAI46_14290 at 3032.519 kb on + strand, within IAI46_14290 at 3032.538 kb on - strand, within IAI46_14290 at 3032.696 kb on + strand, within IAI46_14290 at 3032.830 kb on + strand, within IAI46_14290 at 3032.847 kb on - strand, within IAI46_14290 at 3032.966 kb on + strand, within IAI46_14290 at 3033.113 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 3,030,712 - IAI46_14265 0.72 -2.3 3,030,762 + IAI46_14265 0.78 +0.7 3,030,763 - IAI46_14265 0.78 -0.4 3,030,828 + IAI46_14265 0.86 -0.3 3,030,828 + IAI46_14265 0.86 +0.3 3,030,829 - IAI46_14265 0.86 +1.1 3,030,843 - IAI46_14265 0.87 +0.3 3,030,895 - +0.4 3,030,916 + +0.5 3,030,916 + +0.2 3,030,916 + +1.2 3,030,922 + +0.1 3,030,923 - +0.3 3,030,923 - -2.6 3,030,923 - +1.0 3,030,949 - +0.2 3,031,060 + -0.7 3,031,061 - +1.3 3,031,284 + +0.3 3,031,381 + +0.8 3,031,381 + +0.1 3,031,381 + +0.8 3,031,381 + -0.2 3,031,526 + +0.6 3,031,553 - +0.1 3,031,553 - -0.8 3,031,553 - -1.5 3,031,600 - -0.0 3,031,657 + +0.4 3,032,023 - IAI46_14285 0.57 +0.9 3,032,114 + IAI46_14285 0.73 +1.5 3,032,162 - IAI46_14285 0.81 -0.8 3,032,174 + IAI46_14285 0.83 -1.2 3,032,389 + -1.7 3,032,491 + IAI46_14290 0.15 +0.1 3,032,492 - IAI46_14290 0.15 -0.7 3,032,519 + IAI46_14290 0.18 -0.2 3,032,519 + IAI46_14290 0.18 +0.1 3,032,538 - IAI46_14290 0.21 +0.6 3,032,696 + IAI46_14290 0.40 +0.7 3,032,830 + IAI46_14290 0.57 -0.0 3,032,847 - IAI46_14290 0.59 +0.7 3,032,966 + IAI46_14290 0.74 +0.8 3,033,113 + -0.9
Or see this region's nucleotide sequence