Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_11805 and IAI46_11810 are separated by 118 nucleotides IAI46_11810 and IAI46_11815 are separated by 9 nucleotides IAI46_11815 and IAI46_11820 are separated by 66 nucleotides IAI46_11820 and IAI46_11825 overlap by 4 nucleotides
IAI46_11805: IAI46_11805 - MFS transporter, at 2,494,770 to 2,496,077
_11805
IAI46_11810: IAI46_11810 - isochorismatase family protein, at 2,496,196 to 2,496,837
_11810
IAI46_11815: IAI46_11815 - Asp/Glu racemase, at 2,496,847 to 2,497,548
_11815
IAI46_11820: IAI46_11820 - alpha/beta hydrolase, at 2,497,615 to 2,498,409
_11820
IAI46_11825: IAI46_11825 - FAD-dependent monooxygenase, at 2,498,406 to 2,499,554
_11825
Position (kb)
2496
2497
2498 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2495.860 kb on + strand, within IAI46_11805 at 2495.906 kb on + strand, within IAI46_11805 at 2495.978 kb on - strand at 2496.197 kb on + strand at 2496.198 kb on - strand at 2496.212 kb on + strand at 2496.213 kb on - strand at 2496.249 kb on - strand at 2496.369 kb on + strand, within IAI46_11810 at 2496.370 kb on - strand, within IAI46_11810 at 2496.464 kb on + strand, within IAI46_11810 at 2496.725 kb on + strand, within IAI46_11810 at 2496.736 kb on - strand, within IAI46_11810 at 2496.800 kb on + strand at 2496.819 kb on + strand at 2496.921 kb on - strand, within IAI46_11815 at 2496.921 kb on - strand, within IAI46_11815 at 2497.156 kb on - strand, within IAI46_11815 at 2497.157 kb on + strand, within IAI46_11815 at 2497.157 kb on + strand, within IAI46_11815 at 2497.158 kb on - strand, within IAI46_11815 at 2497.158 kb on - strand, within IAI46_11815 at 2497.201 kb on + strand, within IAI46_11815 at 2497.508 kb on - strand at 2497.593 kb on + strand at 2497.674 kb on + strand at 2497.674 kb on + strand at 2497.675 kb on - strand at 2497.675 kb on - strand at 2497.805 kb on + strand, within IAI46_11820 at 2497.866 kb on - strand, within IAI46_11820 at 2497.926 kb on - strand, within IAI46_11820 at 2497.926 kb on - strand, within IAI46_11820 at 2498.189 kb on + strand, within IAI46_11820 at 2498.244 kb on - strand, within IAI46_11820 at 2498.355 kb on - strand at 2498.449 kb on + strand at 2498.493 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 2,495,860 + IAI46_11805 0.83 -0.4 2,495,906 + IAI46_11805 0.87 -0.7 2,495,978 - +0.4 2,496,197 + +0.3 2,496,198 - -2.4 2,496,212 + -0.1 2,496,213 - +0.1 2,496,249 - -0.7 2,496,369 + IAI46_11810 0.27 +0.5 2,496,370 - IAI46_11810 0.27 +0.0 2,496,464 + IAI46_11810 0.42 +0.3 2,496,725 + IAI46_11810 0.82 +0.2 2,496,736 - IAI46_11810 0.84 -0.2 2,496,800 + +1.7 2,496,819 + +0.0 2,496,921 - IAI46_11815 0.11 +0.7 2,496,921 - IAI46_11815 0.11 +0.0 2,497,156 - IAI46_11815 0.44 -1.2 2,497,157 + IAI46_11815 0.44 -0.5 2,497,157 + IAI46_11815 0.44 +2.2 2,497,158 - IAI46_11815 0.44 -1.1 2,497,158 - IAI46_11815 0.44 +0.4 2,497,201 + IAI46_11815 0.50 -1.8 2,497,508 - +1.0 2,497,593 + +0.5 2,497,674 + -0.0 2,497,674 + -0.0 2,497,675 - -0.0 2,497,675 - +0.8 2,497,805 + IAI46_11820 0.24 +0.7 2,497,866 - IAI46_11820 0.32 -0.5 2,497,926 - IAI46_11820 0.39 +0.3 2,497,926 - IAI46_11820 0.39 +1.0 2,498,189 + IAI46_11820 0.72 +0.1 2,498,244 - IAI46_11820 0.79 +1.5 2,498,355 - +0.1 2,498,449 + -0.6 2,498,493 - +0.4
Or see this region's nucleotide sequence