Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_08850 and IAI46_08855 overlap by 4 nucleotides IAI46_08855 and IAI46_08860 are separated by 129 nucleotides IAI46_08860 and IAI46_08865 are separated by 68 nucleotides
IAI46_08850: IAI46_08850 - beta-ketoacyl-ACP synthase II, at 1,900,104 to 1,901,378
_08850
IAI46_08855: IAI46_08855 - helix-turn-helix transcriptional regulator, at 1,901,375 to 1,901,902
_08855
IAI46_08860: IAI46_08860 - bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase, at 1,902,032 to 1,902,550
_08860
IAI46_08865: IAI46_08865 - Lon protease family protein, at 1,902,619 to 1,904,370
_08865
Position (kb)
1902
1903 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1901.064 kb on - strand, within IAI46_08850 at 1901.309 kb on + strand at 1901.317 kb on - strand at 1901.379 kb on - strand at 1901.379 kb on - strand at 1901.482 kb on + strand, within IAI46_08855 at 1901.483 kb on - strand, within IAI46_08855 at 1901.483 kb on - strand, within IAI46_08855 at 1901.488 kb on + strand, within IAI46_08855 at 1901.531 kb on + strand, within IAI46_08855 at 1901.599 kb on + strand, within IAI46_08855 at 1901.671 kb on - strand, within IAI46_08855 at 1901.676 kb on - strand, within IAI46_08855 at 1901.701 kb on + strand, within IAI46_08855 at 1901.702 kb on - strand, within IAI46_08855 at 1901.765 kb on + strand, within IAI46_08855 at 1901.907 kb on + strand at 1901.907 kb on + strand at 1901.907 kb on + strand at 1901.907 kb on + strand at 1901.908 kb on - strand at 1901.922 kb on - strand at 1901.927 kb on - strand at 1901.943 kb on + strand at 1901.965 kb on + strand at 1901.979 kb on + strand at 1901.980 kb on - strand at 1901.982 kb on + strand at 1901.983 kb on - strand at 1902.594 kb on - strand at 1902.723 kb on + strand at 1902.724 kb on - strand at 1902.744 kb on - strand at 1902.760 kb on + strand at 1902.761 kb on - strand at 1902.830 kb on - strand, within IAI46_08865 at 1902.842 kb on - strand, within IAI46_08865 at 1902.864 kb on + strand, within IAI46_08865 at 1902.955 kb on - strand, within IAI46_08865 at 1903.009 kb on - strand, within IAI46_08865 at 1903.036 kb on - strand, within IAI46_08865 at 1903.046 kb on - strand, within IAI46_08865 at 1903.164 kb on + strand, within IAI46_08865 at 1903.180 kb on - strand, within IAI46_08865 at 1903.473 kb on - strand, within IAI46_08865 at 1903.473 kb on - strand, within IAI46_08865
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,901,064 - IAI46_08850 0.75 +0.4 1,901,309 + -0.1 1,901,317 - -0.2 1,901,379 - +0.7 1,901,379 - +1.5 1,901,482 + IAI46_08855 0.20 -0.3 1,901,483 - IAI46_08855 0.20 -0.1 1,901,483 - IAI46_08855 0.20 +0.3 1,901,488 + IAI46_08855 0.21 -0.5 1,901,531 + IAI46_08855 0.30 -0.5 1,901,599 + IAI46_08855 0.42 +0.4 1,901,671 - IAI46_08855 0.56 -0.0 1,901,676 - IAI46_08855 0.57 +0.5 1,901,701 + IAI46_08855 0.62 +1.4 1,901,702 - IAI46_08855 0.62 -0.0 1,901,765 + IAI46_08855 0.74 +0.7 1,901,907 + -3.0 1,901,907 + -0.2 1,901,907 + +0.3 1,901,907 + +1.1 1,901,908 - -1.1 1,901,922 - -0.9 1,901,927 - +0.6 1,901,943 + -0.2 1,901,965 + -1.1 1,901,979 + -0.6 1,901,980 - +0.7 1,901,982 + +0.5 1,901,983 - +0.2 1,902,594 - -0.5 1,902,723 + +0.3 1,902,724 - -1.1 1,902,744 - +0.0 1,902,760 + +0.8 1,902,761 - +0.0 1,902,830 - IAI46_08865 0.12 +0.3 1,902,842 - IAI46_08865 0.13 -0.7 1,902,864 + IAI46_08865 0.14 -0.2 1,902,955 - IAI46_08865 0.19 +0.2 1,903,009 - IAI46_08865 0.22 -1.2 1,903,036 - IAI46_08865 0.24 -0.4 1,903,046 - IAI46_08865 0.24 +0.1 1,903,164 + IAI46_08865 0.31 -0.7 1,903,180 - IAI46_08865 0.32 -0.6 1,903,473 - IAI46_08865 0.49 +0.0 1,903,473 - IAI46_08865 0.49 -0.1
Or see this region's nucleotide sequence