Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_07495 and IAI46_07500 are separated by 62 nucleotides IAI46_07500 and IAI46_07505 are separated by 165 nucleotides IAI46_07505 and IAI46_07510 are separated by 119 nucleotides
IAI46_07495: IAI46_07495 - peptidase M3, at 1,583,772 to 1,585,628
_07495
IAI46_07500: IAI46_07500 - DUF1471 domain-containing protein, at 1,585,691 to 1,585,948
_07500
IAI46_07505: IAI46_07505 - flavin reductase family protein, at 1,586,114 to 1,586,752
_07505
IAI46_07510: IAI46_07510 - 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF, at 1,586,872 to 1,587,837
_07510
Position (kb)
1585
1586 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1584.699 kb on - strand, within IAI46_07495 at 1584.738 kb on - strand, within IAI46_07495 at 1584.784 kb on + strand, within IAI46_07495 at 1584.784 kb on + strand, within IAI46_07495 at 1584.788 kb on + strand, within IAI46_07495 at 1584.788 kb on + strand, within IAI46_07495 at 1584.831 kb on - strand, within IAI46_07495 at 1584.983 kb on + strand, within IAI46_07495 at 1584.983 kb on + strand, within IAI46_07495 at 1585.043 kb on + strand, within IAI46_07495 at 1585.043 kb on + strand, within IAI46_07495 at 1585.043 kb on + strand, within IAI46_07495 at 1585.044 kb on - strand, within IAI46_07495 at 1585.059 kb on + strand, within IAI46_07495 at 1585.078 kb on - strand, within IAI46_07495 at 1585.148 kb on - strand, within IAI46_07495 at 1585.230 kb on + strand, within IAI46_07495 at 1585.230 kb on + strand, within IAI46_07495 at 1585.472 kb on - strand at 1585.472 kb on - strand at 1585.680 kb on + strand at 1585.698 kb on + strand at 1585.698 kb on + strand at 1585.744 kb on + strand, within IAI46_07500 at 1585.744 kb on + strand, within IAI46_07500 at 1585.745 kb on - strand, within IAI46_07500 at 1586.172 kb on + strand at 1586.175 kb on + strand at 1586.175 kb on + strand at 1586.175 kb on + strand at 1586.175 kb on + strand at 1586.176 kb on - strand at 1586.176 kb on - strand at 1586.176 kb on - strand at 1586.226 kb on + strand, within IAI46_07505 at 1586.264 kb on + strand, within IAI46_07505 at 1586.264 kb on + strand, within IAI46_07505 at 1586.264 kb on + strand, within IAI46_07505 at 1586.265 kb on - strand, within IAI46_07505 at 1586.265 kb on - strand, within IAI46_07505 at 1586.265 kb on - strand, within IAI46_07505 at 1586.611 kb on - strand, within IAI46_07505 at 1586.611 kb on - strand, within IAI46_07505 at 1586.727 kb on + strand at 1586.727 kb on + strand at 1586.728 kb on - strand at 1586.730 kb on + strand at 1586.753 kb on - strand at 1586.753 kb on - strand at 1586.753 kb on - strand at 1586.770 kb on + strand at 1586.784 kb on - strand at 1586.827 kb on - strand at 1586.831 kb on + strand at 1586.831 kb on + strand at 1586.831 kb on + strand at 1586.850 kb on - strand at 1586.855 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,584,699 - IAI46_07495 0.50 -1.1 1,584,738 - IAI46_07495 0.52 +0.7 1,584,784 + IAI46_07495 0.54 +0.0 1,584,784 + IAI46_07495 0.54 +0.1 1,584,788 + IAI46_07495 0.55 -0.1 1,584,788 + IAI46_07495 0.55 -1.2 1,584,831 - IAI46_07495 0.57 -2.1 1,584,983 + IAI46_07495 0.65 +0.7 1,584,983 + IAI46_07495 0.65 -1.6 1,585,043 + IAI46_07495 0.68 -1.1 1,585,043 + IAI46_07495 0.68 +0.1 1,585,043 + IAI46_07495 0.68 +0.1 1,585,044 - IAI46_07495 0.68 +1.1 1,585,059 + IAI46_07495 0.69 +0.1 1,585,078 - IAI46_07495 0.70 +0.1 1,585,148 - IAI46_07495 0.74 +0.3 1,585,230 + IAI46_07495 0.79 +0.5 1,585,230 + IAI46_07495 0.79 -0.3 1,585,472 - +1.0 1,585,472 - +0.2 1,585,680 + +0.8 1,585,698 + +0.1 1,585,698 + +0.7 1,585,744 + IAI46_07500 0.21 +0.2 1,585,744 + IAI46_07500 0.21 +0.9 1,585,745 - IAI46_07500 0.21 -0.3 1,586,172 + +0.5 1,586,175 + -0.0 1,586,175 + +2.0 1,586,175 + +0.0 1,586,175 + +0.8 1,586,176 - -0.2 1,586,176 - -0.4 1,586,176 - -0.2 1,586,226 + IAI46_07505 0.18 +0.6 1,586,264 + IAI46_07505 0.23 -0.2 1,586,264 + IAI46_07505 0.23 -0.1 1,586,264 + IAI46_07505 0.23 +0.6 1,586,265 - IAI46_07505 0.24 -0.9 1,586,265 - IAI46_07505 0.24 -0.5 1,586,265 - IAI46_07505 0.24 -0.5 1,586,611 - IAI46_07505 0.78 +0.7 1,586,611 - IAI46_07505 0.78 +0.4 1,586,727 + +0.4 1,586,727 + -0.3 1,586,728 - +0.5 1,586,730 + -0.3 1,586,753 - +0.7 1,586,753 - -0.1 1,586,753 - +0.6 1,586,770 + +0.9 1,586,784 - -0.7 1,586,827 - -0.0 1,586,831 + -0.0 1,586,831 + +0.0 1,586,831 + +0.7 1,586,850 - -0.9 1,586,855 + +0.0
Or see this region's nucleotide sequence