Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_06330 and IAI46_06335 are separated by 132 nucleotides IAI46_06335 and IAI46_06340 are separated by 44 nucleotides IAI46_06340 and IAI46_06345 are separated by 9 nucleotides
IAI46_06330: IAI46_06330 - cell envelope integrity protein TolA, at 1,354,332 to 1,355,597
_06330
IAI46_06335: IAI46_06335 - Tol-Pal system protein TolB, at 1,355,730 to 1,357,022
_06335
IAI46_06340: IAI46_06340 - peptidoglycan-associated lipoprotein Pal, at 1,357,067 to 1,357,588
_06340
IAI46_06345: IAI46_06345 - cell division protein CpoB, at 1,357,598 to 1,358,398
_06345
Position (kb)
1355
1356
1357
1358 Strain fitness (log2 ratio)
-2
-1
0
1 at 1355.564 kb on + strand at 1355.586 kb on - strand at 1355.586 kb on - strand at 1355.586 kb on - strand at 1355.595 kb on + strand at 1355.595 kb on + strand at 1355.607 kb on - strand at 1355.607 kb on - strand at 1355.607 kb on - strand at 1355.610 kb on + strand at 1355.610 kb on + strand at 1355.611 kb on - strand at 1355.630 kb on + strand at 1355.630 kb on + strand at 1355.630 kb on + strand at 1355.630 kb on + strand at 1355.630 kb on + strand at 1355.631 kb on - strand at 1355.631 kb on - strand at 1355.631 kb on - strand at 1355.631 kb on - strand at 1355.633 kb on + strand at 1355.633 kb on + strand at 1355.639 kb on - strand at 1355.639 kb on - strand at 1355.652 kb on + strand at 1355.652 kb on + strand at 1355.652 kb on + strand at 1355.652 kb on + strand at 1355.652 kb on + strand at 1355.653 kb on - strand at 1355.653 kb on - strand at 1355.656 kb on + strand at 1355.690 kb on + strand at 1355.695 kb on + strand at 1355.755 kb on + strand at 1356.234 kb on + strand, within IAI46_06335 at 1356.434 kb on + strand, within IAI46_06335 at 1356.639 kb on + strand, within IAI46_06335 at 1356.900 kb on + strand at 1356.903 kb on - strand at 1356.917 kb on + strand at 1357.015 kb on - strand at 1357.035 kb on + strand at 1357.035 kb on + strand at 1357.035 kb on + strand at 1357.035 kb on + strand at 1357.035 kb on + strand at 1357.036 kb on - strand at 1357.039 kb on + strand at 1357.040 kb on - strand at 1357.049 kb on + strand at 1357.051 kb on + strand at 1357.060 kb on + strand at 1357.061 kb on - strand at 1357.132 kb on + strand, within IAI46_06340 at 1357.380 kb on + strand, within IAI46_06340 at 1357.531 kb on - strand, within IAI46_06340 at 1357.559 kb on - strand at 1357.586 kb on + strand at 1357.606 kb on + strand at 1357.650 kb on + strand at 1357.690 kb on + strand, within IAI46_06345 at 1357.690 kb on + strand, within IAI46_06345 at 1357.805 kb on - strand, within IAI46_06345 at 1357.841 kb on + strand, within IAI46_06345 at 1357.888 kb on + strand, within IAI46_06345 at 1358.002 kb on + strand, within IAI46_06345
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,355,564 + -0.1 1,355,586 - -0.0 1,355,586 - -0.3 1,355,586 - +0.5 1,355,595 + +0.0 1,355,595 + +0.3 1,355,607 - +0.1 1,355,607 - +0.4 1,355,607 - +0.3 1,355,610 + +0.5 1,355,610 + +0.2 1,355,611 - -0.4 1,355,630 + +0.9 1,355,630 + -0.1 1,355,630 + -0.0 1,355,630 + +0.6 1,355,630 + +0.9 1,355,631 - -0.5 1,355,631 - +1.0 1,355,631 - +0.2 1,355,631 - -0.7 1,355,633 + +0.4 1,355,633 + -0.2 1,355,639 - +0.0 1,355,639 - +0.4 1,355,652 + +0.5 1,355,652 + +0.7 1,355,652 + +0.3 1,355,652 + -0.3 1,355,652 + +0.2 1,355,653 - +0.6 1,355,653 - +0.2 1,355,656 + +0.1 1,355,690 + +0.4 1,355,695 + +0.5 1,355,755 + -1.5 1,356,234 + IAI46_06335 0.39 -0.5 1,356,434 + IAI46_06335 0.54 +0.5 1,356,639 + IAI46_06335 0.70 -0.7 1,356,900 + -0.1 1,356,903 - -1.3 1,356,917 + -1.5 1,357,015 - -0.5 1,357,035 + -0.9 1,357,035 + +0.2 1,357,035 + +0.1 1,357,035 + +0.1 1,357,035 + -0.3 1,357,036 - -1.7 1,357,039 + -0.0 1,357,040 - -0.1 1,357,049 + -0.1 1,357,051 + -0.4 1,357,060 + -1.3 1,357,061 - -0.5 1,357,132 + IAI46_06340 0.12 -1.9 1,357,380 + IAI46_06340 0.60 -0.7 1,357,531 - IAI46_06340 0.89 -0.1 1,357,559 - -1.6 1,357,586 + +0.9 1,357,606 + -1.1 1,357,650 + -1.7 1,357,690 + IAI46_06345 0.11 -0.6 1,357,690 + IAI46_06345 0.11 -0.3 1,357,805 - IAI46_06345 0.26 +0.3 1,357,841 + IAI46_06345 0.30 +0.6 1,357,888 + IAI46_06345 0.36 -0.9 1,358,002 + IAI46_06345 0.50 -1.0
Or see this region's nucleotide sequence