Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05890 and IAI46_05895 are separated by 218 nucleotides IAI46_05895 and IAI46_05900 are separated by 95 nucleotides
IAI46_05890: IAI46_05890 - diguanylate cyclase, at 1,263,137 to 1,264,198
_05890
IAI46_05895: IAI46_05895 - Sec-independent protein translocase subunit TatA, at 1,264,417 to 1,264,626
_05895
IAI46_05900: IAI46_05900 - lipoyl synthase, at 1,264,722 to 1,265,687
_05900
Position (kb)
1264
1265 Strain fitness (log2 ratio)
-2
-1
0
1 at 1263.417 kb on - strand, within IAI46_05890 at 1263.435 kb on - strand, within IAI46_05890 at 1263.506 kb on - strand, within IAI46_05890 at 1263.516 kb on - strand, within IAI46_05890 at 1263.517 kb on + strand, within IAI46_05890 at 1263.606 kb on + strand, within IAI46_05890 at 1263.607 kb on - strand, within IAI46_05890 at 1263.717 kb on + strand, within IAI46_05890 at 1263.717 kb on + strand, within IAI46_05890 at 1263.718 kb on - strand, within IAI46_05890 at 1263.718 kb on - strand, within IAI46_05890 at 1263.718 kb on - strand, within IAI46_05890 at 1263.738 kb on + strand, within IAI46_05890 at 1263.739 kb on - strand, within IAI46_05890 at 1263.857 kb on + strand, within IAI46_05890 at 1263.857 kb on + strand, within IAI46_05890 at 1263.881 kb on + strand, within IAI46_05890 at 1263.888 kb on - strand, within IAI46_05890 at 1264.109 kb on + strand at 1264.109 kb on + strand at 1264.109 kb on + strand at 1264.137 kb on + strand at 1264.137 kb on + strand at 1264.138 kb on - strand at 1264.178 kb on + strand at 1264.178 kb on + strand at 1264.178 kb on + strand at 1264.179 kb on - strand at 1264.179 kb on - strand at 1264.179 kb on - strand at 1264.194 kb on + strand at 1264.245 kb on + strand at 1264.256 kb on + strand at 1264.314 kb on + strand at 1264.315 kb on - strand at 1264.315 kb on - strand at 1264.315 kb on - strand at 1264.315 kb on - strand at 1264.315 kb on - strand at 1264.315 kb on - strand at 1264.315 kb on - strand at 1264.354 kb on + strand at 1264.396 kb on + strand at 1264.396 kb on + strand at 1264.397 kb on - strand at 1264.397 kb on - strand at 1264.397 kb on - strand at 1264.397 kb on - strand at 1264.397 kb on - strand at 1264.398 kb on + strand at 1264.399 kb on - strand at 1264.404 kb on + strand at 1264.404 kb on + strand at 1264.404 kb on + strand at 1264.404 kb on + strand at 1264.405 kb on - strand at 1264.405 kb on - strand at 1264.405 kb on - strand at 1264.431 kb on + strand at 1264.431 kb on + strand at 1264.431 kb on + strand at 1264.432 kb on - strand at 1264.432 kb on - strand at 1264.624 kb on + strand at 1264.624 kb on + strand at 1264.625 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,263,417 - IAI46_05890 0.26 -1.0 1,263,435 - IAI46_05890 0.28 +0.0 1,263,506 - IAI46_05890 0.35 +0.1 1,263,516 - IAI46_05890 0.36 +0.9 1,263,517 + IAI46_05890 0.36 -0.2 1,263,606 + IAI46_05890 0.44 -0.3 1,263,607 - IAI46_05890 0.44 +0.2 1,263,717 + IAI46_05890 0.55 +0.3 1,263,717 + IAI46_05890 0.55 +0.2 1,263,718 - IAI46_05890 0.55 +0.2 1,263,718 - IAI46_05890 0.55 +0.0 1,263,718 - IAI46_05890 0.55 -1.6 1,263,738 + IAI46_05890 0.57 +0.2 1,263,739 - IAI46_05890 0.57 -1.3 1,263,857 + IAI46_05890 0.68 -0.9 1,263,857 + IAI46_05890 0.68 +0.3 1,263,881 + IAI46_05890 0.70 -1.0 1,263,888 - IAI46_05890 0.71 -0.5 1,264,109 + -0.8 1,264,109 + +0.2 1,264,109 + -0.0 1,264,137 + -0.0 1,264,137 + -0.0 1,264,138 - +0.3 1,264,178 + -0.7 1,264,178 + +0.9 1,264,178 + +0.5 1,264,179 - +0.6 1,264,179 - -0.0 1,264,179 - +0.3 1,264,194 + +0.5 1,264,245 + +0.4 1,264,256 + +0.3 1,264,314 + +1.5 1,264,315 - +0.8 1,264,315 - +0.3 1,264,315 - -2.4 1,264,315 - -0.1 1,264,315 - +0.4 1,264,315 - +0.3 1,264,315 - -0.6 1,264,354 + -0.8 1,264,396 + -0.0 1,264,396 + +0.1 1,264,397 - -0.6 1,264,397 - +0.7 1,264,397 - +0.1 1,264,397 - -0.2 1,264,397 - -0.2 1,264,398 + +0.5 1,264,399 - +0.2 1,264,404 + +0.3 1,264,404 + -0.5 1,264,404 + -0.4 1,264,404 + -0.1 1,264,405 - +1.1 1,264,405 - +0.8 1,264,405 - +1.1 1,264,431 + +0.4 1,264,431 + -0.1 1,264,431 + +0.5 1,264,432 - +0.2 1,264,432 - +0.1 1,264,624 + +0.5 1,264,624 + +1.0 1,264,625 - +1.0
Or see this region's nucleotide sequence