Strain Fitness in Serratia liquefaciens MT49 around IAI46_05895

Experiment: No stress control, aerobic

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntIAI46_05890 and IAI46_05895 are separated by 218 nucleotidesIAI46_05895 and IAI46_05900 are separated by 95 nucleotides IAI46_05890: IAI46_05890 - diguanylate cyclase, at 1,263,137 to 1,264,198 _05890 IAI46_05895: IAI46_05895 - Sec-independent protein translocase subunit TatA, at 1,264,417 to 1,264,626 _05895 IAI46_05900: IAI46_05900 - lipoyl synthase, at 1,264,722 to 1,265,687 _05900 Position (kb) 1264 1265Strain fitness (log2 ratio) -2 -1 0 1at 1263.417 kb on - strand, within IAI46_05890at 1263.435 kb on - strand, within IAI46_05890at 1263.506 kb on - strand, within IAI46_05890at 1263.516 kb on - strand, within IAI46_05890at 1263.517 kb on + strand, within IAI46_05890at 1263.606 kb on + strand, within IAI46_05890at 1263.607 kb on - strand, within IAI46_05890at 1263.717 kb on + strand, within IAI46_05890at 1263.717 kb on + strand, within IAI46_05890at 1263.718 kb on - strand, within IAI46_05890at 1263.718 kb on - strand, within IAI46_05890at 1263.718 kb on - strand, within IAI46_05890at 1263.738 kb on + strand, within IAI46_05890at 1263.739 kb on - strand, within IAI46_05890at 1263.857 kb on + strand, within IAI46_05890at 1263.857 kb on + strand, within IAI46_05890at 1263.881 kb on + strand, within IAI46_05890at 1263.888 kb on - strand, within IAI46_05890at 1264.109 kb on + strandat 1264.109 kb on + strandat 1264.109 kb on + strandat 1264.137 kb on + strandat 1264.137 kb on + strandat 1264.138 kb on - strandat 1264.178 kb on + strandat 1264.178 kb on + strandat 1264.178 kb on + strandat 1264.179 kb on - strandat 1264.179 kb on - strandat 1264.179 kb on - strandat 1264.194 kb on + strandat 1264.245 kb on + strandat 1264.256 kb on + strandat 1264.314 kb on + strandat 1264.315 kb on - strandat 1264.315 kb on - strandat 1264.315 kb on - strandat 1264.315 kb on - strandat 1264.315 kb on - strandat 1264.315 kb on - strandat 1264.315 kb on - strandat 1264.354 kb on + strandat 1264.396 kb on + strandat 1264.396 kb on + strandat 1264.397 kb on - strandat 1264.397 kb on - strandat 1264.397 kb on - strandat 1264.397 kb on - strandat 1264.397 kb on - strandat 1264.398 kb on + strandat 1264.399 kb on - strandat 1264.404 kb on + strandat 1264.404 kb on + strandat 1264.404 kb on + strandat 1264.404 kb on + strandat 1264.405 kb on - strandat 1264.405 kb on - strandat 1264.405 kb on - strandat 1264.431 kb on + strandat 1264.431 kb on + strandat 1264.431 kb on + strandat 1264.432 kb on - strandat 1264.432 kb on - strandat 1264.624 kb on + strandat 1264.624 kb on + strandat 1264.625 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction No stress control, aerobic
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1,263,417 - IAI46_05890 0.26 -1.0
1,263,435 - IAI46_05890 0.28 +0.0
1,263,506 - IAI46_05890 0.35 +0.1
1,263,516 - IAI46_05890 0.36 +0.9
1,263,517 + IAI46_05890 0.36 -0.2
1,263,606 + IAI46_05890 0.44 -0.3
1,263,607 - IAI46_05890 0.44 +0.2
1,263,717 + IAI46_05890 0.55 +0.3
1,263,717 + IAI46_05890 0.55 +0.2
1,263,718 - IAI46_05890 0.55 +0.2
1,263,718 - IAI46_05890 0.55 +0.0
1,263,718 - IAI46_05890 0.55 -1.6
1,263,738 + IAI46_05890 0.57 +0.2
1,263,739 - IAI46_05890 0.57 -1.3
1,263,857 + IAI46_05890 0.68 -0.9
1,263,857 + IAI46_05890 0.68 +0.3
1,263,881 + IAI46_05890 0.70 -1.0
1,263,888 - IAI46_05890 0.71 -0.5
1,264,109 + -0.8
1,264,109 + +0.2
1,264,109 + -0.0
1,264,137 + -0.0
1,264,137 + -0.0
1,264,138 - +0.3
1,264,178 + -0.7
1,264,178 + +0.9
1,264,178 + +0.5
1,264,179 - +0.6
1,264,179 - -0.0
1,264,179 - +0.3
1,264,194 + +0.5
1,264,245 + +0.4
1,264,256 + +0.3
1,264,314 + +1.5
1,264,315 - +0.8
1,264,315 - +0.3
1,264,315 - -2.4
1,264,315 - -0.1
1,264,315 - +0.4
1,264,315 - +0.3
1,264,315 - -0.6
1,264,354 + -0.8
1,264,396 + -0.0
1,264,396 + +0.1
1,264,397 - -0.6
1,264,397 - +0.7
1,264,397 - +0.1
1,264,397 - -0.2
1,264,397 - -0.2
1,264,398 + +0.5
1,264,399 - +0.2
1,264,404 + +0.3
1,264,404 + -0.5
1,264,404 + -0.4
1,264,404 + -0.1
1,264,405 - +1.1
1,264,405 - +0.8
1,264,405 - +1.1
1,264,431 + +0.4
1,264,431 + -0.1
1,264,431 + +0.5
1,264,432 - +0.2
1,264,432 - +0.1
1,264,624 + +0.5
1,264,624 + +1.0
1,264,625 - +1.0

Or see this region's nucleotide sequence