Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_05245 and IAI46_05250 are separated by 203 nucleotides IAI46_05250 and IAI46_05255 are separated by 166 nucleotides
IAI46_05245: IAI46_05245 - molecular chaperone HtpG, at 1,127,211 to 1,129,076
_05245
IAI46_05250: IAI46_05250 - adenylate kinase, at 1,129,280 to 1,129,924
_05250
IAI46_05255: IAI46_05255 - helix-turn-helix domain-containing protein, at 1,130,091 to 1,131,224
_05255
Position (kb)
1129
1130 Strain fitness (log2 ratio)
-1
0
1
2 at 1128.315 kb on + strand, within IAI46_05245 at 1128.459 kb on + strand, within IAI46_05245 at 1128.460 kb on - strand, within IAI46_05245 at 1128.495 kb on + strand, within IAI46_05245 at 1128.498 kb on + strand, within IAI46_05245 at 1128.516 kb on + strand, within IAI46_05245 at 1128.516 kb on + strand, within IAI46_05245 at 1128.517 kb on - strand, within IAI46_05245 at 1128.517 kb on - strand, within IAI46_05245 at 1128.517 kb on - strand, within IAI46_05245 at 1128.517 kb on - strand, within IAI46_05245 at 1128.517 kb on - strand, within IAI46_05245 at 1128.517 kb on - strand, within IAI46_05245 at 1128.615 kb on + strand, within IAI46_05245 at 1128.615 kb on + strand, within IAI46_05245 at 1128.616 kb on - strand, within IAI46_05245 at 1128.813 kb on - strand, within IAI46_05245 at 1129.044 kb on - strand at 1129.085 kb on - strand at 1129.085 kb on - strand at 1129.086 kb on + strand at 1129.086 kb on + strand at 1129.087 kb on - strand at 1129.087 kb on - strand at 1129.087 kb on - strand at 1129.087 kb on - strand at 1129.087 kb on - strand at 1129.088 kb on + strand at 1129.089 kb on - strand at 1129.089 kb on - strand at 1129.089 kb on - strand at 1129.089 kb on - strand at 1129.089 kb on - strand at 1129.197 kb on - strand at 1129.982 kb on + strand at 1130.054 kb on + strand at 1130.054 kb on + strand at 1130.054 kb on + strand at 1130.055 kb on - strand at 1130.056 kb on + strand at 1130.056 kb on + strand at 1130.056 kb on + strand at 1130.057 kb on - strand at 1130.070 kb on + strand at 1130.363 kb on - strand, within IAI46_05255 at 1130.375 kb on + strand, within IAI46_05255 at 1130.398 kb on + strand, within IAI46_05255 at 1130.398 kb on + strand, within IAI46_05255 at 1130.407 kb on - strand, within IAI46_05255 at 1130.569 kb on + strand, within IAI46_05255 at 1130.779 kb on + strand, within IAI46_05255 at 1130.779 kb on + strand, within IAI46_05255 at 1130.908 kb on + strand, within IAI46_05255 at 1130.909 kb on - strand, within IAI46_05255
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 1,128,315 + IAI46_05245 0.59 +1.0 1,128,459 + IAI46_05245 0.67 +0.3 1,128,460 - IAI46_05245 0.67 -0.8 1,128,495 + IAI46_05245 0.69 +0.1 1,128,498 + IAI46_05245 0.69 -0.8 1,128,516 + IAI46_05245 0.70 +0.3 1,128,516 + IAI46_05245 0.70 +0.3 1,128,517 - IAI46_05245 0.70 +0.7 1,128,517 - IAI46_05245 0.70 -0.1 1,128,517 - IAI46_05245 0.70 -0.0 1,128,517 - IAI46_05245 0.70 -0.9 1,128,517 - IAI46_05245 0.70 +0.5 1,128,517 - IAI46_05245 0.70 -0.1 1,128,615 + IAI46_05245 0.75 -0.5 1,128,615 + IAI46_05245 0.75 +0.1 1,128,616 - IAI46_05245 0.75 -1.5 1,128,813 - IAI46_05245 0.86 -0.3 1,129,044 - -0.2 1,129,085 - -0.5 1,129,085 - +0.1 1,129,086 + +0.5 1,129,086 + -0.6 1,129,087 - +0.2 1,129,087 - +1.3 1,129,087 - -0.5 1,129,087 - +0.0 1,129,087 - -0.6 1,129,088 + +0.6 1,129,089 - +2.4 1,129,089 - -0.8 1,129,089 - +0.6 1,129,089 - -0.0 1,129,089 - -0.6 1,129,197 - +0.2 1,129,982 + -1.6 1,130,054 + -0.5 1,130,054 + +0.8 1,130,054 + -0.2 1,130,055 - -0.1 1,130,056 + +0.8 1,130,056 + -0.2 1,130,056 + -0.3 1,130,057 - -0.4 1,130,070 + +0.3 1,130,363 - IAI46_05255 0.24 +0.3 1,130,375 + IAI46_05255 0.25 +0.5 1,130,398 + IAI46_05255 0.27 -0.2 1,130,398 + IAI46_05255 0.27 +0.3 1,130,407 - IAI46_05255 0.28 +1.0 1,130,569 + IAI46_05255 0.42 -0.3 1,130,779 + IAI46_05255 0.61 +0.5 1,130,779 + IAI46_05255 0.61 -0.3 1,130,908 + IAI46_05255 0.72 +0.3 1,130,909 - IAI46_05255 0.72 +0.8
Or see this region's nucleotide sequence