Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_03850 and IAI46_03855 are separated by 252 nucleotides IAI46_03855 and IAI46_03860 are separated by 310 nucleotides IAI46_03860 and IAI46_03865 are separated by 3 nucleotides IAI46_03865 and IAI46_03870 are separated by 61 nucleotides IAI46_03870 and IAI46_03875 are separated by 52 nucleotides IAI46_03875 and IAI46_03885 are separated by 321 nucleotides
IAI46_03850: IAI46_03850 - alanine--tRNA ligase, at 838,713 to 841,340
_03850
IAI46_03855: IAI46_03855 - carbon storage regulator CsrA, at 841,593 to 841,778
_03855
IAI46_03860: IAI46_03860 - tRNA-Ser, at 842,089 to 842,181
_03860
IAI46_03865: IAI46_03865 - tRNA-Arg, at 842,185 to 842,261
_03865
IAI46_03870: IAI46_03870 - tRNA-Arg, at 842,323 to 842,399
_03870
IAI46_03875: IAI46_03875 - tRNA-Arg, at 842,452 to 842,528
_03875
IAI46_03885: IAI46_03885 - fructose-1-phosphate/6-phosphogluconate phosphatase, at 842,850 to 843,416
_03885
Position (kb) 842
843 Strain fitness (log2 ratio) -2
-1
0
1
2 at 841.342 kb on + strand at 841.348 kb on + strand at 841.352 kb on + strand at 841.370 kb on + strand at 841.459 kb on + strand at 841.459 kb on + strand at 841.459 kb on + strand at 841.466 kb on - strand at 841.490 kb on + strand at 841.491 kb on - strand at 841.491 kb on - strand at 841.491 kb on - strand at 841.496 kb on + strand at 841.515 kb on + strand at 841.530 kb on + strand at 841.530 kb on + strand at 841.530 kb on + strand at 841.531 kb on - strand at 841.531 kb on - strand at 841.531 kb on - strand at 841.773 kb on + strand at 841.773 kb on + strand at 841.832 kb on + strand at 841.833 kb on - strand at 841.833 kb on - strand at 841.897 kb on - strand at 841.920 kb on + strand at 842.262 kb on + strand at 842.272 kb on + strand at 842.272 kb on + strand at 842.272 kb on + strand at 842.272 kb on + strand at 842.285 kb on + strand at 842.285 kb on + strand at 842.285 kb on + strand at 842.285 kb on + strand at 842.285 kb on + strand at 842.293 kb on + strand at 842.293 kb on + strand at 842.293 kb on + strand at 842.298 kb on + strand at 842.298 kb on + strand at 842.298 kb on + strand at 842.298 kb on + strand at 842.445 kb on + strand at 842.448 kb on + strand at 842.460 kb on - strand, within IAI46_03875 at 842.606 kb on + strand at 842.680 kb on + strand at 842.680 kb on + strand at 842.681 kb on - strand at 842.727 kb on + strand at 842.727 kb on + strand at 842.727 kb on + strand at 842.728 kb on - strand at 842.732 kb on + strand at 842.732 kb on + strand at 842.853 kb on + strand at 842.853 kb on + strand at 842.854 kb on - strand at 842.854 kb on - strand at 842.854 kb on - strand at 842.873 kb on + strand at 843.144 kb on + strand, within IAI46_03885 at 843.144 kb on + strand, within IAI46_03885 at 843.144 kb on + strand, within IAI46_03885 at 843.145 kb on - strand, within IAI46_03885 at 843.262 kb on + strand, within IAI46_03885 at 843.262 kb on + strand, within IAI46_03885 at 843.262 kb on + strand, within IAI46_03885 at 843.263 kb on - strand, within IAI46_03885 at 843.263 kb on - strand, within IAI46_03885 at 843.263 kb on - strand, within IAI46_03885 at 843.313 kb on + strand, within IAI46_03885 at 843.313 kb on + strand, within IAI46_03885 at 843.313 kb on + strand, within IAI46_03885 at 843.313 kb on + strand, within IAI46_03885 at 843.314 kb on - strand, within IAI46_03885 at 843.362 kb on + strand at 843.387 kb on - strand at 843.387 kb on - strand at 843.397 kb on + strand at 843.397 kb on + strand at 843.398 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 841,342 + +1.5 841,348 + -0.7 841,352 + -0.6 841,370 + +0.4 841,459 + +0.2 841,459 + -0.1 841,459 + +1.1 841,466 - -0.3 841,490 + -1.6 841,491 - +0.0 841,491 - +0.1 841,491 - +1.0 841,496 + +0.1 841,515 + +0.9 841,530 + +1.3 841,530 + -0.0 841,530 + +0.1 841,531 - +1.7 841,531 - -1.0 841,531 - +0.7 841,773 + +0.1 841,773 + -0.1 841,832 + -1.8 841,833 - +0.7 841,833 - +1.0 841,897 - +0.5 841,920 + -0.3 842,262 + -0.5 842,272 + -1.6 842,272 + +0.1 842,272 + -0.2 842,272 + -0.8 842,285 + -0.1 842,285 + +0.5 842,285 + -0.2 842,285 + -0.7 842,285 + -1.4 842,293 + -0.2 842,293 + +0.8 842,293 + +0.3 842,298 + -1.3 842,298 + +0.1 842,298 + +0.8 842,298 + -0.9 842,445 + +0.6 842,448 + +0.6 842,460 - IAI46_03875 0.10 -0.3 842,606 + -0.0 842,680 + -0.5 842,680 + -1.6 842,681 - -1.7 842,727 + -0.5 842,727 + +0.7 842,727 + -0.8 842,728 - +1.2 842,732 + -0.2 842,732 + +1.1 842,853 + +0.5 842,853 + +1.0 842,854 - +2.0 842,854 - +0.1 842,854 - +0.0 842,873 + +1.3 843,144 + IAI46_03885 0.52 +0.4 843,144 + IAI46_03885 0.52 -2.2 843,144 + IAI46_03885 0.52 -0.3 843,145 - IAI46_03885 0.52 +0.3 843,262 + IAI46_03885 0.73 -0.3 843,262 + IAI46_03885 0.73 +0.5 843,262 + IAI46_03885 0.73 -0.0 843,263 - IAI46_03885 0.73 +0.1 843,263 - IAI46_03885 0.73 +1.1 843,263 - IAI46_03885 0.73 +1.3 843,313 + IAI46_03885 0.82 -0.7 843,313 + IAI46_03885 0.82 +0.7 843,313 + IAI46_03885 0.82 -0.1 843,313 + IAI46_03885 0.82 +0.6 843,314 - IAI46_03885 0.82 +0.3 843,362 + -0.2 843,387 - +1.4 843,387 - +0.4 843,397 + -0.5 843,397 + +0.1 843,398 - +0.7
Or see this region's nucleotide sequence