Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_02435 and IAI46_02440 are separated by 548 nucleotides IAI46_02440 and IAI46_02445 are separated by 36 nucleotides IAI46_02445 and IAI46_02450 are separated by 751 nucleotides
IAI46_02435: IAI46_02435 - hypothetical protein, at 522,993 to 523,673
_02435
IAI46_02440: IAI46_02440 - hypothetical protein, at 524,222 to 524,506
_02440
IAI46_02445: IAI46_02445 - hypothetical protein, at 524,543 to 525,268
_02445
IAI46_02450: IAI46_02450 - AraC family transcriptional regulator, at 526,020 to 526,826
_02450
Position (kb)
524
525
526 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 523.616 kb on - strand at 523.621 kb on + strand at 523.622 kb on - strand at 523.719 kb on + strand at 523.720 kb on - strand at 523.816 kb on - strand at 523.838 kb on + strand at 523.926 kb on - strand at 523.956 kb on - strand at 524.187 kb on - strand at 524.220 kb on - strand at 524.220 kb on - strand at 524.220 kb on - strand at 524.332 kb on + strand, within IAI46_02440 at 524.405 kb on - strand, within IAI46_02440 at 524.690 kb on + strand, within IAI46_02445 at 524.751 kb on - strand, within IAI46_02445 at 524.779 kb on - strand, within IAI46_02445 at 524.779 kb on - strand, within IAI46_02445 at 525.027 kb on - strand, within IAI46_02445 at 525.110 kb on - strand, within IAI46_02445 at 525.118 kb on + strand, within IAI46_02445 at 525.162 kb on + strand, within IAI46_02445 at 525.208 kb on + strand at 525.219 kb on + strand at 525.288 kb on - strand at 525.316 kb on - strand at 525.356 kb on - strand at 525.357 kb on + strand at 525.358 kb on - strand at 525.392 kb on + strand at 525.397 kb on - strand at 525.397 kb on - strand at 525.404 kb on + strand at 525.405 kb on - strand at 525.428 kb on + strand at 525.435 kb on + strand at 525.436 kb on - strand at 525.439 kb on + strand at 525.444 kb on + strand at 525.444 kb on + strand at 525.589 kb on + strand at 525.589 kb on + strand at 525.599 kb on + strand at 525.599 kb on + strand at 525.611 kb on + strand at 525.611 kb on + strand at 525.623 kb on + strand at 525.623 kb on + strand at 525.641 kb on + strand at 525.647 kb on + strand at 525.729 kb on + strand at 525.730 kb on - strand at 525.730 kb on - strand at 525.730 kb on - strand at 525.731 kb on + strand at 525.731 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.733 kb on + strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.734 kb on - strand at 525.756 kb on + strand at 525.756 kb on + strand at 525.756 kb on + strand at 525.756 kb on + strand at 525.761 kb on + strand at 525.762 kb on - strand at 525.762 kb on - strand at 525.767 kb on + strand at 525.768 kb on - strand at 525.768 kb on - strand at 525.823 kb on + strand at 525.851 kb on + strand at 525.852 kb on - strand at 525.896 kb on + strand at 525.896 kb on + strand at 525.897 kb on - strand at 525.898 kb on + strand at 525.900 kb on + strand at 525.900 kb on + strand at 525.901 kb on - strand at 525.925 kb on + strand at 525.954 kb on + strand at 525.954 kb on + strand at 525.955 kb on - strand at 525.955 kb on - strand at 525.955 kb on - strand at 525.996 kb on + strand at 525.996 kb on + strand at 525.996 kb on + strand at 525.996 kb on + strand at 526.000 kb on + strand at 526.000 kb on + strand at 526.000 kb on + strand at 526.000 kb on + strand at 526.001 kb on - strand at 526.007 kb on - strand at 526.015 kb on - strand at 526.040 kb on + strand at 526.066 kb on + strand at 526.066 kb on + strand at 526.067 kb on - strand at 526.067 kb on - strand at 526.067 kb on - strand at 526.067 kb on - strand at 526.109 kb on + strand, within IAI46_02450 at 526.109 kb on + strand, within IAI46_02450 at 526.109 kb on + strand, within IAI46_02450 at 526.110 kb on - strand, within IAI46_02450 at 526.110 kb on - strand, within IAI46_02450 at 526.135 kb on + strand, within IAI46_02450 at 526.136 kb on - strand, within IAI46_02450 at 526.136 kb on - strand, within IAI46_02450 at 526.200 kb on - strand, within IAI46_02450 at 526.200 kb on - strand, within IAI46_02450 at 526.200 kb on - strand, within IAI46_02450 at 526.205 kb on + strand, within IAI46_02450 at 526.205 kb on + strand, within IAI46_02450 at 526.211 kb on + strand, within IAI46_02450 at 526.243 kb on + strand, within IAI46_02450 at 526.247 kb on + strand, within IAI46_02450
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 523,616 - -0.0 523,621 + -0.4 523,622 - +0.2 523,719 + -0.1 523,720 - +1.5 523,816 - +0.8 523,838 + -0.9 523,926 - -0.1 523,956 - +0.6 524,187 - +0.5 524,220 - -0.2 524,220 - -0.3 524,220 - +0.0 524,332 + IAI46_02440 0.39 +0.0 524,405 - IAI46_02440 0.64 +0.5 524,690 + IAI46_02445 0.20 +0.5 524,751 - IAI46_02445 0.29 +0.7 524,779 - IAI46_02445 0.33 -0.3 524,779 - IAI46_02445 0.33 +1.1 525,027 - IAI46_02445 0.67 +0.8 525,110 - IAI46_02445 0.78 +2.1 525,118 + IAI46_02445 0.79 +0.5 525,162 + IAI46_02445 0.85 +0.6 525,208 + +0.8 525,219 + -0.1 525,288 - -0.3 525,316 - -0.3 525,356 - -1.7 525,357 + +0.6 525,358 - +0.4 525,392 + -0.1 525,397 - +0.0 525,397 - +0.9 525,404 + +0.6 525,405 - +0.5 525,428 + +0.9 525,435 + -0.5 525,436 - +0.2 525,439 + -0.5 525,444 + -0.1 525,444 + -0.1 525,589 + +0.5 525,589 + -1.9 525,599 + -0.5 525,599 + +0.3 525,611 + +0.1 525,611 + -0.6 525,623 + -0.6 525,623 + +0.5 525,641 + +0.1 525,647 + +0.6 525,729 + +0.3 525,730 - +1.8 525,730 - -0.2 525,730 - +0.5 525,731 + -0.2 525,731 + +0.3 525,733 + +0.3 525,733 + +0.5 525,733 + -0.2 525,733 + -0.0 525,733 + +1.3 525,733 + +0.2 525,734 - +1.4 525,734 - +0.1 525,734 - +0.7 525,734 - +0.7 525,734 - -0.7 525,734 - -0.8 525,734 - +0.5 525,734 - -0.1 525,734 - +0.6 525,734 - +0.4 525,756 + +1.1 525,756 + -0.2 525,756 + +0.6 525,756 + -0.5 525,761 + +0.9 525,762 - +0.3 525,762 - +0.3 525,767 + -0.0 525,768 - -0.0 525,768 - -0.2 525,823 + +0.1 525,851 + -1.2 525,852 - -0.2 525,896 + -0.3 525,896 + -0.8 525,897 - -0.3 525,898 + -0.3 525,900 + -0.7 525,900 + -0.2 525,901 - +1.0 525,925 + +0.7 525,954 + -0.8 525,954 + +0.2 525,955 - +0.8 525,955 - +0.1 525,955 - +0.4 525,996 + -0.3 525,996 + +0.2 525,996 + +0.3 525,996 + +0.2 526,000 + +0.5 526,000 + +0.7 526,000 + +0.7 526,000 + +0.8 526,001 - +0.1 526,007 - +0.7 526,015 - -0.3 526,040 + +0.0 526,066 + +1.0 526,066 + +0.5 526,067 - -0.2 526,067 - -0.2 526,067 - +0.4 526,067 - -0.3 526,109 + IAI46_02450 0.11 +0.7 526,109 + IAI46_02450 0.11 +0.4 526,109 + IAI46_02450 0.11 +0.6 526,110 - IAI46_02450 0.11 -0.0 526,110 - IAI46_02450 0.11 -0.1 526,135 + IAI46_02450 0.14 -0.4 526,136 - IAI46_02450 0.14 +0.3 526,136 - IAI46_02450 0.14 -0.2 526,200 - IAI46_02450 0.22 +0.2 526,200 - IAI46_02450 0.22 -1.2 526,200 - IAI46_02450 0.22 +0.2 526,205 + IAI46_02450 0.23 +0.0 526,205 + IAI46_02450 0.23 +0.6 526,211 + IAI46_02450 0.24 -0.6 526,243 + IAI46_02450 0.28 -0.1 526,247 + IAI46_02450 0.28 +1.1
Or see this region's nucleotide sequence