Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01840 and IAI46_01845 are separated by 269 nucleotides IAI46_01845 and IAI46_01850 are separated by 17 nucleotides IAI46_01850 and IAI46_01855 are separated by 106 nucleotides
IAI46_01840: IAI46_01840 - octaprenyl diphosphate synthase, at 397,239 to 398,210
_01840
IAI46_01845: IAI46_01845 - 50S ribosomal protein L21, at 398,480 to 398,791
_01845
IAI46_01850: IAI46_01850 - 50S ribosomal protein L27, at 398,809 to 399,066
_01850
IAI46_01855: IAI46_01855 - DMT family transporter, at 399,173 to 400,144
_01855
Position (kb) 398
399 Strain fitness (log2 ratio) -1
0
1
2 at 398.268 kb on - strand at 398.268 kb on - strand at 398.296 kb on - strand at 398.316 kb on - strand at 398.357 kb on + strand at 399.086 kb on + strand at 399.092 kb on + strand at 399.092 kb on + strand at 399.092 kb on + strand at 399.092 kb on + strand at 399.092 kb on + strand at 399.092 kb on + strand at 399.092 kb on + strand at 399.169 kb on + strand at 399.270 kb on + strand at 399.270 kb on + strand at 399.286 kb on + strand, within IAI46_01855 at 399.461 kb on + strand, within IAI46_01855 at 399.511 kb on + strand, within IAI46_01855 at 399.511 kb on + strand, within IAI46_01855 at 399.647 kb on + strand, within IAI46_01855 at 399.698 kb on + strand, within IAI46_01855 at 399.698 kb on + strand, within IAI46_01855 at 399.723 kb on + strand, within IAI46_01855 at 399.723 kb on + strand, within IAI46_01855 at 399.723 kb on + strand, within IAI46_01855 at 399.768 kb on + strand, within IAI46_01855 at 399.768 kb on + strand, within IAI46_01855
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 398,268 - -0.3 398,268 - -0.2 398,296 - +0.9 398,316 - +0.8 398,357 + -0.1 399,086 + +0.8 399,092 + -0.9 399,092 + +2.1 399,092 + +1.1 399,092 + +0.6 399,092 + -1.2 399,092 + -0.5 399,092 + -1.6 399,169 + -1.5 399,270 + +0.5 399,270 + +0.3 399,286 + IAI46_01855 0.12 +0.2 399,461 + IAI46_01855 0.30 +0.5 399,511 + IAI46_01855 0.35 +0.1 399,511 + IAI46_01855 0.35 +0.2 399,647 + IAI46_01855 0.49 +1.3 399,698 + IAI46_01855 0.54 +0.7 399,698 + IAI46_01855 0.54 -0.3 399,723 + IAI46_01855 0.57 +1.1 399,723 + IAI46_01855 0.57 +1.3 399,723 + IAI46_01855 0.57 +0.2 399,768 + IAI46_01855 0.61 +0.1 399,768 + IAI46_01855 0.61 +0.7
Or see this region's nucleotide sequence