Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_01065 and IAI46_01070 are separated by 13 nucleotides IAI46_01070 and IAI46_01075 overlap by 4 nucleotides IAI46_01075 and IAI46_01080 are separated by 80 nucleotides IAI46_01080 and IAI46_01085 are separated by 3 nucleotides IAI46_01085 and IAI46_01090 are separated by 3 nucleotides
IAI46_01065: IAI46_01065 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE, at 238,018 to 238,773
_01065
IAI46_01070: IAI46_01070 - SCP2 domain-containing protein, at 238,787 to 239,395
_01070
IAI46_01075: IAI46_01075 - ubiquinone biosynthesis regulatory protein kinase UbiB, at 239,392 to 241,023
_01075
IAI46_01080: IAI46_01080 - Sec-independent protein translocase subunit TatA, at 241,104 to 241,367
_01080
IAI46_01085: IAI46_01085 - Sec-independent protein translocase subunit TatB, at 241,371 to 241,937
_01085
IAI46_01090: IAI46_01090 - Sec-independent protein translocase subunit TatC, at 241,941 to 242,711
_01090
Position (kb) 239
240
241
242 Strain fitness (log2 ratio) -1
0
1
2 at 238.774 kb on + strand at 238.774 kb on + strand at 238.902 kb on + strand, within IAI46_01070 at 239.089 kb on + strand, within IAI46_01070 at 239.100 kb on + strand, within IAI46_01070 at 241.054 kb on + strand at 241.057 kb on - strand at 241.096 kb on + strand at 241.096 kb on + strand at 241.096 kb on + strand at 241.096 kb on + strand at 241.097 kb on - strand at 241.097 kb on - strand at 241.115 kb on + strand at 241.118 kb on + strand at 241.118 kb on + strand at 241.118 kb on + strand at 241.119 kb on - strand at 241.119 kb on - strand at 241.122 kb on - strand at 241.122 kb on - strand at 241.310 kb on + strand, within IAI46_01080 at 241.365 kb on + strand at 241.366 kb on - strand at 241.389 kb on - strand at 241.426 kb on + strand at 241.426 kb on + strand at 241.456 kb on + strand, within IAI46_01085 at 241.456 kb on + strand, within IAI46_01085 at 241.568 kb on - strand, within IAI46_01085 at 241.656 kb on + strand, within IAI46_01085 at 241.768 kb on + strand, within IAI46_01085 at 241.768 kb on + strand, within IAI46_01085 at 241.769 kb on - strand, within IAI46_01085 at 241.804 kb on + strand, within IAI46_01085 at 241.922 kb on + strand at 241.922 kb on + strand at 241.935 kb on + strand at 241.935 kb on + strand at 241.955 kb on + strand at 241.956 kb on - strand at 241.981 kb on + strand at 241.981 kb on + strand at 241.981 kb on + strand at 241.981 kb on + strand at 241.982 kb on - strand at 241.983 kb on + strand at 242.003 kb on - strand at 242.009 kb on + strand at 242.012 kb on + strand at 242.013 kb on - strand at 242.013 kb on - strand at 242.020 kb on + strand, within IAI46_01090 at 242.020 kb on + strand, within IAI46_01090
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 238,774 + +0.0 238,774 + -0.1 238,902 + IAI46_01070 0.19 -0.3 239,089 + IAI46_01070 0.50 +1.5 239,100 + IAI46_01070 0.51 +0.1 241,054 + +0.5 241,057 - -0.2 241,096 + -0.7 241,096 + +0.6 241,096 + +0.9 241,096 + -0.1 241,097 - +0.9 241,097 - +0.7 241,115 + -0.3 241,118 + +0.0 241,118 + +0.3 241,118 + -0.0 241,119 - +0.8 241,119 - +0.8 241,122 - +0.3 241,122 - +0.2 241,310 + IAI46_01080 0.78 +0.5 241,365 + +0.4 241,366 - -0.6 241,389 - +1.1 241,426 + +0.7 241,426 + -0.7 241,456 + IAI46_01085 0.15 +2.5 241,456 + IAI46_01085 0.15 +0.2 241,568 - IAI46_01085 0.35 +0.1 241,656 + IAI46_01085 0.50 -0.8 241,768 + IAI46_01085 0.70 -0.3 241,768 + IAI46_01085 0.70 -0.4 241,769 - IAI46_01085 0.70 +0.7 241,804 + IAI46_01085 0.76 +0.6 241,922 + +0.6 241,922 + +1.7 241,935 + +0.6 241,935 + +0.7 241,955 + -0.0 241,956 - +0.9 241,981 + +0.4 241,981 + -1.1 241,981 + -1.4 241,981 + +0.0 241,982 - +0.5 241,983 + -0.9 242,003 - +0.9 242,009 + -0.5 242,012 + -0.1 242,013 - +0.1 242,013 - +1.3 242,020 + IAI46_01090 0.10 -0.2 242,020 + IAI46_01090 0.10 -1.3
Or see this region's nucleotide sequence