Experiment: No stress control, aerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI46_00085 and IAI46_00090 are separated by 166 nucleotides IAI46_00090 and IAI46_00095 are separated by 109 nucleotides
IAI46_00085: IAI46_00085 - glyoxylate/hydroxypyruvate reductase GhrB, at 18,301 to 19,275
_00085
IAI46_00090: IAI46_00090 - MFS transporter, at 19,442 to 20,710
_00090
IAI46_00095: IAI46_00095 - sugar kinase, at 20,820 to 21,779
_00095
Position (kb) 19
20
21 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 18.467 kb on - strand, within IAI46_00085 at 18.513 kb on + strand, within IAI46_00085 at 18.513 kb on + strand, within IAI46_00085 at 18.513 kb on + strand, within IAI46_00085 at 18.514 kb on - strand, within IAI46_00085 at 18.514 kb on - strand, within IAI46_00085 at 18.514 kb on - strand, within IAI46_00085 at 18.514 kb on - strand, within IAI46_00085 at 18.514 kb on - strand, within IAI46_00085 at 18.657 kb on + strand, within IAI46_00085 at 18.658 kb on - strand, within IAI46_00085 at 18.658 kb on - strand, within IAI46_00085 at 18.658 kb on - strand, within IAI46_00085 at 18.715 kb on - strand, within IAI46_00085 at 18.753 kb on + strand, within IAI46_00085 at 18.754 kb on - strand, within IAI46_00085 at 18.755 kb on + strand, within IAI46_00085 at 18.755 kb on + strand, within IAI46_00085 at 18.755 kb on + strand, within IAI46_00085 at 18.755 kb on + strand, within IAI46_00085 at 18.755 kb on + strand, within IAI46_00085 at 18.755 kb on + strand, within IAI46_00085 at 18.756 kb on - strand, within IAI46_00085 at 18.756 kb on - strand, within IAI46_00085 at 18.756 kb on - strand, within IAI46_00085 at 18.810 kb on + strand, within IAI46_00085 at 18.811 kb on - strand, within IAI46_00085 at 18.835 kb on - strand, within IAI46_00085 at 18.919 kb on + strand, within IAI46_00085 at 18.919 kb on + strand, within IAI46_00085 at 18.920 kb on - strand, within IAI46_00085 at 18.920 kb on - strand, within IAI46_00085 at 18.920 kb on - strand, within IAI46_00085 at 18.920 kb on - strand, within IAI46_00085 at 18.920 kb on - strand, within IAI46_00085 at 19.011 kb on + strand, within IAI46_00085 at 19.021 kb on - strand, within IAI46_00085 at 19.159 kb on + strand, within IAI46_00085 at 19.159 kb on + strand, within IAI46_00085 at 19.159 kb on + strand, within IAI46_00085 at 19.253 kb on + strand at 19.263 kb on + strand at 19.263 kb on + strand at 19.263 kb on + strand at 19.263 kb on + strand at 19.263 kb on + strand at 19.263 kb on + strand at 19.264 kb on - strand at 19.264 kb on - strand at 19.280 kb on + strand at 19.281 kb on - strand at 19.281 kb on - strand at 19.281 kb on - strand at 19.281 kb on - strand at 19.291 kb on + strand at 19.291 kb on + strand at 19.292 kb on - strand at 19.292 kb on - strand at 19.292 kb on - strand at 19.349 kb on - strand at 19.352 kb on + strand at 19.352 kb on + strand at 19.352 kb on + strand at 19.353 kb on - strand at 19.412 kb on - strand at 19.413 kb on + strand at 19.413 kb on + strand at 19.413 kb on + strand at 19.413 kb on + strand at 19.413 kb on + strand at 19.413 kb on + strand at 19.413 kb on + strand at 19.414 kb on - strand at 19.432 kb on + strand at 19.443 kb on + strand at 19.444 kb on - strand at 19.526 kb on - strand at 19.531 kb on + strand at 19.531 kb on + strand at 19.532 kb on - strand at 19.532 kb on - strand at 19.532 kb on - strand at 19.532 kb on - strand at 19.533 kb on + strand at 19.533 kb on + strand at 19.533 kb on + strand at 19.533 kb on + strand at 19.534 kb on - strand at 19.534 kb on - strand at 19.698 kb on + strand, within IAI46_00090 at 19.698 kb on + strand, within IAI46_00090 at 19.698 kb on + strand, within IAI46_00090 at 19.699 kb on - strand, within IAI46_00090 at 19.731 kb on + strand, within IAI46_00090 at 19.731 kb on + strand, within IAI46_00090 at 19.731 kb on + strand, within IAI46_00090 at 19.731 kb on + strand, within IAI46_00090 at 19.732 kb on - strand, within IAI46_00090 at 19.732 kb on - strand, within IAI46_00090 at 19.732 kb on - strand, within IAI46_00090 at 19.764 kb on + strand, within IAI46_00090 at 19.764 kb on + strand, within IAI46_00090 at 19.764 kb on + strand, within IAI46_00090 at 19.764 kb on + strand, within IAI46_00090 at 19.764 kb on + strand, within IAI46_00090 at 19.765 kb on - strand, within IAI46_00090 at 19.765 kb on - strand, within IAI46_00090 at 19.765 kb on - strand, within IAI46_00090 at 19.820 kb on - strand, within IAI46_00090 at 19.881 kb on + strand, within IAI46_00090 at 19.881 kb on + strand, within IAI46_00090 at 19.881 kb on + strand, within IAI46_00090 at 19.881 kb on + strand, within IAI46_00090 at 19.881 kb on + strand, within IAI46_00090 at 19.882 kb on - strand, within IAI46_00090 at 19.886 kb on + strand, within IAI46_00090 at 19.942 kb on + strand, within IAI46_00090 at 19.943 kb on - strand, within IAI46_00090 at 19.943 kb on - strand, within IAI46_00090 at 19.943 kb on - strand, within IAI46_00090 at 19.943 kb on - strand, within IAI46_00090 at 20.041 kb on - strand, within IAI46_00090 at 20.041 kb on - strand, within IAI46_00090 at 20.044 kb on + strand, within IAI46_00090 at 20.044 kb on + strand, within IAI46_00090 at 20.045 kb on - strand, within IAI46_00090 at 20.045 kb on - strand, within IAI46_00090 at 20.217 kb on + strand, within IAI46_00090 at 20.217 kb on + strand, within IAI46_00090 at 20.290 kb on + strand, within IAI46_00090 at 20.290 kb on + strand, within IAI46_00090 at 20.291 kb on - strand, within IAI46_00090 at 20.291 kb on - strand, within IAI46_00090 at 20.291 kb on - strand, within IAI46_00090 at 20.291 kb on - strand, within IAI46_00090 at 20.334 kb on + strand, within IAI46_00090 at 20.335 kb on - strand, within IAI46_00090 at 20.335 kb on - strand, within IAI46_00090 at 20.380 kb on + strand, within IAI46_00090 at 20.497 kb on - strand, within IAI46_00090 at 20.635 kb on - strand at 20.646 kb on + strand at 20.646 kb on + strand at 20.647 kb on - strand at 20.653 kb on + strand at 20.673 kb on + strand at 20.673 kb on + strand at 20.673 kb on + strand at 20.673 kb on + strand at 20.673 kb on + strand at 20.674 kb on - strand at 20.674 kb on - strand at 20.674 kb on - strand at 20.674 kb on - strand at 20.761 kb on + strand at 20.762 kb on - strand at 20.794 kb on + strand at 20.794 kb on + strand at 20.795 kb on - strand at 20.797 kb on + strand at 20.797 kb on + strand at 20.797 kb on + strand at 20.797 kb on + strand at 20.798 kb on - strand at 20.798 kb on - strand at 20.798 kb on - strand at 20.804 kb on + strand at 20.805 kb on - strand at 20.816 kb on - strand at 20.817 kb on + strand at 20.817 kb on + strand at 20.817 kb on + strand at 20.818 kb on - strand at 20.818 kb on - strand at 20.821 kb on + strand at 20.821 kb on + strand at 20.894 kb on + strand at 21.071 kb on + strand, within IAI46_00095 at 21.088 kb on - strand, within IAI46_00095 at 21.379 kb on + strand, within IAI46_00095 at 21.379 kb on + strand, within IAI46_00095 at 21.380 kb on - strand, within IAI46_00095 at 21.496 kb on + strand, within IAI46_00095 at 21.500 kb on + strand, within IAI46_00095 at 21.500 kb on + strand, within IAI46_00095 at 21.500 kb on + strand, within IAI46_00095 at 21.501 kb on - strand, within IAI46_00095 at 21.501 kb on - strand, within IAI46_00095 at 21.501 kb on - strand, within IAI46_00095 at 21.501 kb on - strand, within IAI46_00095
Per-strain Table
Position Strand Gene LocusTag Fraction No stress control, aerobic remove 18,467 - IAI46_00085 0.17 +0.1 18,513 + IAI46_00085 0.22 +0.4 18,513 + IAI46_00085 0.22 -1.2 18,513 + IAI46_00085 0.22 +0.6 18,514 - IAI46_00085 0.22 +0.5 18,514 - IAI46_00085 0.22 +1.3 18,514 - IAI46_00085 0.22 +0.2 18,514 - IAI46_00085 0.22 -0.2 18,514 - IAI46_00085 0.22 -0.2 18,657 + IAI46_00085 0.37 -0.1 18,658 - IAI46_00085 0.37 -0.6 18,658 - IAI46_00085 0.37 -0.1 18,658 - IAI46_00085 0.37 +0.5 18,715 - IAI46_00085 0.42 +0.4 18,753 + IAI46_00085 0.46 -0.8 18,754 - IAI46_00085 0.46 -0.3 18,755 + IAI46_00085 0.47 -0.2 18,755 + IAI46_00085 0.47 +0.6 18,755 + IAI46_00085 0.47 +0.1 18,755 + IAI46_00085 0.47 +0.2 18,755 + IAI46_00085 0.47 -0.5 18,755 + IAI46_00085 0.47 -0.0 18,756 - IAI46_00085 0.47 +1.8 18,756 - IAI46_00085 0.47 -0.0 18,756 - IAI46_00085 0.47 +0.1 18,810 + IAI46_00085 0.52 +0.5 18,811 - IAI46_00085 0.52 -0.0 18,835 - IAI46_00085 0.55 +0.5 18,919 + IAI46_00085 0.63 +1.2 18,919 + IAI46_00085 0.63 +1.2 18,920 - IAI46_00085 0.63 -0.0 18,920 - IAI46_00085 0.63 -0.3 18,920 - IAI46_00085 0.63 -0.1 18,920 - IAI46_00085 0.63 -0.5 18,920 - IAI46_00085 0.63 +0.1 19,011 + IAI46_00085 0.73 +1.0 19,021 - IAI46_00085 0.74 +0.1 19,159 + IAI46_00085 0.88 +0.8 19,159 + IAI46_00085 0.88 -0.4 19,159 + IAI46_00085 0.88 -0.1 19,253 + +0.1 19,263 + -0.7 19,263 + +1.0 19,263 + +0.4 19,263 + +1.6 19,263 + +0.7 19,263 + -0.7 19,264 - +0.2 19,264 - +0.8 19,280 + -0.4 19,281 - -0.7 19,281 - +0.4 19,281 - -0.1 19,281 - +0.1 19,291 + -0.1 19,291 + -0.3 19,292 - +0.5 19,292 - +0.5 19,292 - -0.8 19,349 - +0.4 19,352 + -0.0 19,352 + +0.0 19,352 + -0.8 19,353 - -0.2 19,412 - +0.4 19,413 + -1.4 19,413 + +0.3 19,413 + +0.0 19,413 + -0.3 19,413 + +0.3 19,413 + -0.2 19,413 + -0.6 19,414 - -0.0 19,432 + -0.7 19,443 + +0.0 19,444 - -0.3 19,526 - -0.2 19,531 + +0.3 19,531 + -0.6 19,532 - +0.8 19,532 - +0.7 19,532 - +0.4 19,532 - -0.4 19,533 + -0.6 19,533 + +0.6 19,533 + -0.5 19,533 + +0.4 19,534 - +0.4 19,534 - -1.3 19,698 + IAI46_00090 0.20 -1.0 19,698 + IAI46_00090 0.20 -0.7 19,698 + IAI46_00090 0.20 +0.7 19,699 - IAI46_00090 0.20 +0.9 19,731 + IAI46_00090 0.23 +0.3 19,731 + IAI46_00090 0.23 -0.5 19,731 + IAI46_00090 0.23 +0.2 19,731 + IAI46_00090 0.23 +0.2 19,732 - IAI46_00090 0.23 +0.4 19,732 - IAI46_00090 0.23 +0.4 19,732 - IAI46_00090 0.23 +0.1 19,764 + IAI46_00090 0.25 -0.0 19,764 + IAI46_00090 0.25 +0.2 19,764 + IAI46_00090 0.25 -0.1 19,764 + IAI46_00090 0.25 +0.1 19,764 + IAI46_00090 0.25 +0.9 19,765 - IAI46_00090 0.25 -0.4 19,765 - IAI46_00090 0.25 +0.2 19,765 - IAI46_00090 0.25 -0.9 19,820 - IAI46_00090 0.30 -0.1 19,881 + IAI46_00090 0.35 -0.3 19,881 + IAI46_00090 0.35 +0.2 19,881 + IAI46_00090 0.35 -0.7 19,881 + IAI46_00090 0.35 +0.0 19,881 + IAI46_00090 0.35 +0.1 19,882 - IAI46_00090 0.35 +0.8 19,886 + IAI46_00090 0.35 -3.0 19,942 + IAI46_00090 0.39 +0.7 19,943 - IAI46_00090 0.39 -0.7 19,943 - IAI46_00090 0.39 -0.1 19,943 - IAI46_00090 0.39 +0.3 19,943 - IAI46_00090 0.39 -0.5 20,041 - IAI46_00090 0.47 -0.7 20,041 - IAI46_00090 0.47 +0.6 20,044 + IAI46_00090 0.47 +0.2 20,044 + IAI46_00090 0.47 +0.0 20,045 - IAI46_00090 0.48 +0.0 20,045 - IAI46_00090 0.48 +0.1 20,217 + IAI46_00090 0.61 -0.5 20,217 + IAI46_00090 0.61 +1.9 20,290 + IAI46_00090 0.67 -0.3 20,290 + IAI46_00090 0.67 +0.2 20,291 - IAI46_00090 0.67 +0.0 20,291 - IAI46_00090 0.67 -0.0 20,291 - IAI46_00090 0.67 +0.7 20,291 - IAI46_00090 0.67 -0.2 20,334 + IAI46_00090 0.70 +0.6 20,335 - IAI46_00090 0.70 +0.0 20,335 - IAI46_00090 0.70 +0.1 20,380 + IAI46_00090 0.74 -1.4 20,497 - IAI46_00090 0.83 +0.8 20,635 - -1.3 20,646 + -1.3 20,646 + +2.2 20,647 - +1.0 20,653 + -0.0 20,673 + +0.6 20,673 + +0.8 20,673 + +0.2 20,673 + +0.7 20,673 + -0.4 20,674 - -0.3 20,674 - +0.3 20,674 - -0.2 20,674 - +0.7 20,761 + +0.6 20,762 - +0.3 20,794 + +0.2 20,794 + +0.1 20,795 - +0.0 20,797 + -0.2 20,797 + +1.3 20,797 + +0.5 20,797 + -0.4 20,798 - -0.8 20,798 - -0.6 20,798 - -0.0 20,804 + +0.3 20,805 - +0.5 20,816 - -1.3 20,817 + +0.0 20,817 + +0.6 20,817 + +0.0 20,818 - -0.1 20,818 - +0.2 20,821 + +0.2 20,821 + +0.3 20,894 + +0.3 21,071 + IAI46_00095 0.26 -0.3 21,088 - IAI46_00095 0.28 +0.6 21,379 + IAI46_00095 0.58 +0.7 21,379 + IAI46_00095 0.58 -0.3 21,380 - IAI46_00095 0.58 +0.3 21,496 + IAI46_00095 0.70 +0.5 21,500 + IAI46_00095 0.71 -1.0 21,500 + IAI46_00095 0.71 +0.2 21,500 + IAI46_00095 0.71 +0.3 21,501 - IAI46_00095 0.71 -0.2 21,501 - IAI46_00095 0.71 +0.8 21,501 - IAI46_00095 0.71 +1.6 21,501 - IAI46_00095 0.71 -0.2
Or see this region's nucleotide sequence