Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3045 and Echvi_3046 overlap by 4 nucleotides Echvi_3046 and Echvi_3047 overlap by 14 nucleotides Echvi_3047 and Echvi_3048 are separated by 885 nucleotides
Echvi_3045: Echvi_3045 - hypothetical protein, at 3,638,132 to 3,638,710
_3045
Echvi_3046: Echvi_3046 - hypothetical protein, at 3,638,707 to 3,639,549
_3046
Echvi_3047: Echvi_3047 - Leucine Rich Repeat., at 3,639,536 to 3,641,983
_3047
Echvi_3048: Echvi_3048 - Uncharacterized conserved protein, at 3,642,869 to 3,643,984
_3048
Position (kb)
3639
3640
3641
3642 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3638.541 kb on - strand, within Echvi_3045 at 3638.578 kb on - strand, within Echvi_3045 at 3638.584 kb on + strand, within Echvi_3045 at 3638.591 kb on - strand, within Echvi_3045 at 3638.687 kb on - strand at 3638.687 kb on - strand at 3638.723 kb on + strand at 3638.723 kb on + strand at 3638.724 kb on - strand at 3638.726 kb on + strand at 3638.739 kb on + strand at 3638.740 kb on - strand at 3638.751 kb on - strand at 3638.908 kb on + strand, within Echvi_3046 at 3638.914 kb on - strand, within Echvi_3046 at 3638.945 kb on + strand, within Echvi_3046 at 3638.974 kb on - strand, within Echvi_3046 at 3639.082 kb on - strand, within Echvi_3046 at 3639.108 kb on - strand, within Echvi_3046 at 3639.113 kb on + strand, within Echvi_3046 at 3639.160 kb on - strand, within Echvi_3046 at 3639.249 kb on - strand, within Echvi_3046 at 3639.255 kb on + strand, within Echvi_3046 at 3639.255 kb on + strand, within Echvi_3046 at 3639.329 kb on - strand, within Echvi_3046 at 3639.394 kb on - strand, within Echvi_3046 at 3639.487 kb on - strand at 3639.487 kb on - strand at 3639.489 kb on + strand at 3639.489 kb on + strand at 3639.490 kb on - strand at 3639.490 kb on - strand at 3639.490 kb on - strand at 3639.529 kb on + strand at 3639.530 kb on - strand at 3639.531 kb on + strand at 3639.535 kb on + strand at 3639.547 kb on + strand at 3639.552 kb on + strand at 3639.553 kb on - strand at 3639.554 kb on + strand at 3639.554 kb on + strand at 3639.554 kb on + strand at 3639.554 kb on + strand at 3639.556 kb on + strand at 3639.556 kb on + strand at 3639.557 kb on - strand at 3639.594 kb on + strand at 3639.594 kb on + strand at 3639.667 kb on - strand at 3639.691 kb on + strand at 3639.697 kb on - strand at 3639.724 kb on + strand at 3639.750 kb on - strand at 3639.772 kb on + strand at 3639.773 kb on - strand at 3639.777 kb on + strand at 3639.778 kb on - strand at 3639.784 kb on - strand, within Echvi_3047 at 3639.818 kb on - strand, within Echvi_3047 at 3639.823 kb on + strand, within Echvi_3047 at 3639.824 kb on - strand, within Echvi_3047 at 3639.824 kb on - strand, within Echvi_3047 at 3639.824 kb on - strand, within Echvi_3047 at 3639.824 kb on - strand, within Echvi_3047 at 3639.840 kb on - strand, within Echvi_3047 at 3639.853 kb on - strand, within Echvi_3047 at 3639.997 kb on + strand, within Echvi_3047 at 3639.998 kb on - strand, within Echvi_3047 at 3640.049 kb on - strand, within Echvi_3047 at 3640.049 kb on - strand, within Echvi_3047 at 3640.054 kb on - strand, within Echvi_3047 at 3640.061 kb on - strand, within Echvi_3047 at 3640.061 kb on - strand, within Echvi_3047 at 3640.061 kb on - strand, within Echvi_3047 at 3640.064 kb on + strand, within Echvi_3047 at 3640.064 kb on + strand, within Echvi_3047 at 3640.065 kb on - strand, within Echvi_3047 at 3640.067 kb on - strand, within Echvi_3047 at 3640.277 kb on - strand, within Echvi_3047 at 3640.277 kb on - strand, within Echvi_3047 at 3640.288 kb on + strand, within Echvi_3047 at 3640.289 kb on - strand, within Echvi_3047 at 3640.289 kb on - strand, within Echvi_3047 at 3640.298 kb on - strand, within Echvi_3047 at 3640.327 kb on + strand, within Echvi_3047 at 3640.328 kb on - strand, within Echvi_3047 at 3640.338 kb on - strand, within Echvi_3047 at 3640.338 kb on - strand, within Echvi_3047 at 3640.346 kb on + strand, within Echvi_3047 at 3640.394 kb on + strand, within Echvi_3047 at 3640.394 kb on + strand, within Echvi_3047 at 3640.395 kb on - strand, within Echvi_3047 at 3640.407 kb on + strand, within Echvi_3047 at 3640.408 kb on - strand, within Echvi_3047 at 3640.422 kb on + strand, within Echvi_3047 at 3640.423 kb on - strand, within Echvi_3047 at 3640.423 kb on - strand, within Echvi_3047 at 3640.429 kb on + strand, within Echvi_3047 at 3640.457 kb on - strand, within Echvi_3047 at 3640.549 kb on + strand, within Echvi_3047 at 3640.570 kb on - strand, within Echvi_3047 at 3640.615 kb on - strand, within Echvi_3047 at 3640.627 kb on + strand, within Echvi_3047 at 3640.632 kb on - strand, within Echvi_3047 at 3640.664 kb on - strand, within Echvi_3047 at 3640.701 kb on + strand, within Echvi_3047 at 3640.771 kb on + strand, within Echvi_3047 at 3640.815 kb on - strand, within Echvi_3047 at 3640.922 kb on - strand, within Echvi_3047 at 3640.922 kb on - strand, within Echvi_3047 at 3640.958 kb on + strand, within Echvi_3047 at 3640.958 kb on + strand, within Echvi_3047 at 3640.958 kb on + strand, within Echvi_3047 at 3640.959 kb on - strand, within Echvi_3047 at 3640.959 kb on - strand, within Echvi_3047 at 3640.959 kb on - strand, within Echvi_3047 at 3640.972 kb on + strand, within Echvi_3047 at 3641.011 kb on - strand, within Echvi_3047 at 3641.110 kb on + strand, within Echvi_3047 at 3641.110 kb on + strand, within Echvi_3047 at 3641.110 kb on + strand, within Echvi_3047 at 3641.111 kb on - strand, within Echvi_3047 at 3641.125 kb on - strand, within Echvi_3047 at 3641.209 kb on - strand, within Echvi_3047 at 3641.209 kb on - strand, within Echvi_3047 at 3641.251 kb on + strand, within Echvi_3047 at 3641.276 kb on + strand, within Echvi_3047 at 3641.305 kb on + strand, within Echvi_3047 at 3641.306 kb on - strand, within Echvi_3047 at 3641.328 kb on + strand, within Echvi_3047 at 3641.329 kb on - strand, within Echvi_3047 at 3641.340 kb on + strand, within Echvi_3047 at 3641.340 kb on + strand, within Echvi_3047 at 3641.341 kb on - strand, within Echvi_3047 at 3641.347 kb on - strand, within Echvi_3047 at 3641.362 kb on + strand, within Echvi_3047 at 3641.365 kb on - strand, within Echvi_3047 at 3641.426 kb on - strand, within Echvi_3047 at 3641.461 kb on + strand, within Echvi_3047 at 3641.486 kb on - strand, within Echvi_3047 at 3641.495 kb on - strand, within Echvi_3047 at 3641.552 kb on - strand, within Echvi_3047 at 3641.577 kb on - strand, within Echvi_3047 at 3641.590 kb on - strand, within Echvi_3047 at 3641.596 kb on + strand, within Echvi_3047 at 3641.597 kb on - strand, within Echvi_3047 at 3641.597 kb on - strand, within Echvi_3047 at 3641.607 kb on + strand, within Echvi_3047 at 3641.706 kb on + strand, within Echvi_3047 at 3641.818 kb on + strand at 3641.818 kb on + strand at 3641.819 kb on - strand at 3641.871 kb on + strand at 3641.872 kb on - strand at 3641.872 kb on - strand at 3641.872 kb on - strand at 3641.872 kb on - strand at 3641.890 kb on - strand at 3641.924 kb on - strand at 3641.971 kb on - strand at 3641.975 kb on + strand at 3641.976 kb on - strand at 3641.976 kb on - strand at 3641.979 kb on - strand at 3641.979 kb on - strand at 3641.981 kb on + strand at 3641.982 kb on - strand at 3641.982 kb on - strand at 3642.062 kb on - strand at 3642.121 kb on + strand at 3642.121 kb on + strand at 3642.121 kb on + strand at 3642.121 kb on + strand at 3642.121 kb on + strand at 3642.121 kb on + strand at 3642.121 kb on + strand at 3642.122 kb on - strand at 3642.123 kb on + strand at 3642.123 kb on + strand at 3642.123 kb on + strand at 3642.123 kb on + strand at 3642.123 kb on + strand at 3642.123 kb on + strand at 3642.123 kb on + strand at 3642.124 kb on - strand at 3642.124 kb on - strand at 3642.124 kb on - strand at 3642.128 kb on - strand at 3642.335 kb on + strand at 3642.373 kb on - strand at 3642.450 kb on + strand at 3642.451 kb on - strand at 3642.465 kb on + strand at 3642.484 kb on - strand at 3642.484 kb on - strand at 3642.526 kb on + strand at 3642.526 kb on + strand at 3642.529 kb on + strand at 3642.529 kb on + strand at 3642.530 kb on - strand at 3642.530 kb on - strand at 3642.540 kb on + strand at 3642.541 kb on - strand at 3642.584 kb on + strand at 3642.617 kb on + strand at 3642.617 kb on + strand at 3642.617 kb on + strand at 3642.620 kb on + strand at 3642.620 kb on + strand at 3642.621 kb on - strand at 3642.621 kb on - strand at 3642.621 kb on - strand at 3642.641 kb on + strand at 3642.641 kb on + strand at 3642.641 kb on + strand at 3642.641 kb on + strand at 3642.642 kb on - strand at 3642.642 kb on - strand at 3642.642 kb on - strand at 3642.642 kb on - strand at 3642.645 kb on + strand at 3642.645 kb on + strand at 3642.645 kb on + strand at 3642.645 kb on + strand at 3642.646 kb on - strand at 3642.646 kb on - strand at 3642.648 kb on - strand at 3642.648 kb on - strand at 3642.687 kb on - strand at 3642.727 kb on + strand at 3642.860 kb on + strand at 3642.861 kb on - strand at 3642.870 kb on + strand at 3642.871 kb on - strand at 3642.913 kb on + strand at 3642.914 kb on - strand at 3642.914 kb on - strand at 3642.973 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,638,541 - Echvi_3045 0.71 +0.1 3,638,578 - Echvi_3045 0.77 +0.7 3,638,584 + Echvi_3045 0.78 +0.2 3,638,591 - Echvi_3045 0.79 -0.1 3,638,687 - +0.5 3,638,687 - +0.1 3,638,723 + +1.0 3,638,723 + -1.5 3,638,724 - -0.5 3,638,726 + -0.1 3,638,739 + -0.6 3,638,740 - +0.2 3,638,751 - +0.7 3,638,908 + Echvi_3046 0.24 +0.6 3,638,914 - Echvi_3046 0.25 -0.8 3,638,945 + Echvi_3046 0.28 -0.3 3,638,974 - Echvi_3046 0.32 -0.3 3,639,082 - Echvi_3046 0.44 -0.6 3,639,108 - Echvi_3046 0.48 +0.1 3,639,113 + Echvi_3046 0.48 +0.4 3,639,160 - Echvi_3046 0.54 +0.8 3,639,249 - Echvi_3046 0.64 +0.2 3,639,255 + Echvi_3046 0.65 +0.2 3,639,255 + Echvi_3046 0.65 +0.7 3,639,329 - Echvi_3046 0.74 +1.0 3,639,394 - Echvi_3046 0.81 +0.7 3,639,487 - -0.9 3,639,487 - -0.4 3,639,489 + +1.8 3,639,489 + +0.6 3,639,490 - +2.5 3,639,490 - +0.7 3,639,490 - +0.5 3,639,529 + +0.2 3,639,530 - -0.1 3,639,531 + -0.5 3,639,535 + +1.9 3,639,547 + -0.2 3,639,552 + +0.1 3,639,553 - +0.3 3,639,554 + +0.6 3,639,554 + +0.5 3,639,554 + -0.1 3,639,554 + -0.5 3,639,556 + +0.1 3,639,556 + -0.5 3,639,557 - +0.9 3,639,594 + +0.6 3,639,594 + +0.5 3,639,667 - +0.3 3,639,691 + +0.4 3,639,697 - +0.6 3,639,724 + -0.6 3,639,750 - +0.9 3,639,772 + -0.3 3,639,773 - -0.1 3,639,777 + +0.2 3,639,778 - -0.6 3,639,784 - Echvi_3047 0.10 +0.6 3,639,818 - Echvi_3047 0.12 +0.2 3,639,823 + Echvi_3047 0.12 +0.3 3,639,824 - Echvi_3047 0.12 +0.0 3,639,824 - Echvi_3047 0.12 +0.3 3,639,824 - Echvi_3047 0.12 +0.9 3,639,824 - Echvi_3047 0.12 +0.5 3,639,840 - Echvi_3047 0.12 +0.2 3,639,853 - Echvi_3047 0.13 +0.1 3,639,997 + Echvi_3047 0.19 +0.2 3,639,998 - Echvi_3047 0.19 -0.5 3,640,049 - Echvi_3047 0.21 +0.4 3,640,049 - Echvi_3047 0.21 -0.4 3,640,054 - Echvi_3047 0.21 +0.3 3,640,061 - Echvi_3047 0.21 +0.2 3,640,061 - Echvi_3047 0.21 +0.7 3,640,061 - Echvi_3047 0.21 +0.6 3,640,064 + Echvi_3047 0.22 +0.1 3,640,064 + Echvi_3047 0.22 -0.5 3,640,065 - Echvi_3047 0.22 +2.2 3,640,067 - Echvi_3047 0.22 +0.2 3,640,277 - Echvi_3047 0.30 +0.3 3,640,277 - Echvi_3047 0.30 +0.0 3,640,288 + Echvi_3047 0.31 +0.8 3,640,289 - Echvi_3047 0.31 +0.4 3,640,289 - Echvi_3047 0.31 +0.3 3,640,298 - Echvi_3047 0.31 +0.3 3,640,327 + Echvi_3047 0.32 +0.4 3,640,328 - Echvi_3047 0.32 -0.4 3,640,338 - Echvi_3047 0.33 +0.6 3,640,338 - Echvi_3047 0.33 -0.0 3,640,346 + Echvi_3047 0.33 +0.7 3,640,394 + Echvi_3047 0.35 +0.7 3,640,394 + Echvi_3047 0.35 +1.2 3,640,395 - Echvi_3047 0.35 +0.5 3,640,407 + Echvi_3047 0.36 +0.5 3,640,408 - Echvi_3047 0.36 -0.7 3,640,422 + Echvi_3047 0.36 +1.0 3,640,423 - Echvi_3047 0.36 +0.3 3,640,423 - Echvi_3047 0.36 -0.1 3,640,429 + Echvi_3047 0.36 +0.7 3,640,457 - Echvi_3047 0.38 +0.6 3,640,549 + Echvi_3047 0.41 +0.1 3,640,570 - Echvi_3047 0.42 +0.6 3,640,615 - Echvi_3047 0.44 +1.2 3,640,627 + Echvi_3047 0.45 +0.1 3,640,632 - Echvi_3047 0.45 +1.8 3,640,664 - Echvi_3047 0.46 +0.3 3,640,701 + Echvi_3047 0.48 +0.3 3,640,771 + Echvi_3047 0.50 +1.8 3,640,815 - Echvi_3047 0.52 +1.3 3,640,922 - Echvi_3047 0.57 +0.4 3,640,922 - Echvi_3047 0.57 +0.3 3,640,958 + Echvi_3047 0.58 +0.8 3,640,958 + Echvi_3047 0.58 -0.0 3,640,958 + Echvi_3047 0.58 +0.5 3,640,959 - Echvi_3047 0.58 +0.5 3,640,959 - Echvi_3047 0.58 +1.6 3,640,959 - Echvi_3047 0.58 +0.8 3,640,972 + Echvi_3047 0.59 +1.0 3,641,011 - Echvi_3047 0.60 +0.2 3,641,110 + Echvi_3047 0.64 +1.3 3,641,110 + Echvi_3047 0.64 +2.4 3,641,110 + Echvi_3047 0.64 +0.4 3,641,111 - Echvi_3047 0.64 +1.2 3,641,125 - Echvi_3047 0.65 +0.5 3,641,209 - Echvi_3047 0.68 +1.7 3,641,209 - Echvi_3047 0.68 -0.1 3,641,251 + Echvi_3047 0.70 +0.3 3,641,276 + Echvi_3047 0.71 -0.1 3,641,305 + Echvi_3047 0.72 +2.1 3,641,306 - Echvi_3047 0.72 +0.4 3,641,328 + Echvi_3047 0.73 +0.9 3,641,329 - Echvi_3047 0.73 -0.2 3,641,340 + Echvi_3047 0.74 -0.7 3,641,340 + Echvi_3047 0.74 +0.3 3,641,341 - Echvi_3047 0.74 -0.3 3,641,347 - Echvi_3047 0.74 +0.0 3,641,362 + Echvi_3047 0.75 +0.9 3,641,365 - Echvi_3047 0.75 +0.4 3,641,426 - Echvi_3047 0.77 +0.1 3,641,461 + Echvi_3047 0.79 +1.0 3,641,486 - Echvi_3047 0.80 +0.5 3,641,495 - Echvi_3047 0.80 +0.0 3,641,552 - Echvi_3047 0.82 +0.8 3,641,577 - Echvi_3047 0.83 +0.8 3,641,590 - Echvi_3047 0.84 +0.5 3,641,596 + Echvi_3047 0.84 -2.3 3,641,597 - Echvi_3047 0.84 -0.3 3,641,597 - Echvi_3047 0.84 +1.2 3,641,607 + Echvi_3047 0.85 +0.2 3,641,706 + Echvi_3047 0.89 +0.6 3,641,818 + -0.4 3,641,818 + +0.3 3,641,819 - +0.6 3,641,871 + +1.0 3,641,872 - +0.5 3,641,872 - +0.6 3,641,872 - +0.4 3,641,872 - +0.5 3,641,890 - -1.0 3,641,924 - +2.7 3,641,971 - +0.8 3,641,975 + +0.5 3,641,976 - +0.2 3,641,976 - -1.1 3,641,979 - +0.4 3,641,979 - +0.4 3,641,981 + +0.3 3,641,982 - +0.3 3,641,982 - +1.7 3,642,062 - +0.8 3,642,121 + +0.4 3,642,121 + +0.9 3,642,121 + +1.2 3,642,121 + +1.1 3,642,121 + +0.5 3,642,121 + +0.1 3,642,121 + +0.6 3,642,122 - +0.5 3,642,123 + +1.0 3,642,123 + -0.5 3,642,123 + +0.1 3,642,123 + +0.1 3,642,123 + +0.5 3,642,123 + -1.2 3,642,123 + +0.1 3,642,124 - +0.2 3,642,124 - +0.8 3,642,124 - -1.6 3,642,128 - -0.7 3,642,335 + -0.2 3,642,373 - +0.4 3,642,450 + -0.5 3,642,451 - -0.4 3,642,465 + +0.1 3,642,484 - -0.5 3,642,484 - -0.0 3,642,526 + +0.9 3,642,526 + -0.6 3,642,529 + +0.5 3,642,529 + -0.2 3,642,530 - +0.0 3,642,530 - +0.2 3,642,540 + +0.5 3,642,541 - -1.0 3,642,584 + -0.3 3,642,617 + -1.2 3,642,617 + +0.6 3,642,617 + -1.7 3,642,620 + +0.4 3,642,620 + +0.0 3,642,621 - +0.2 3,642,621 - +0.2 3,642,621 - -0.2 3,642,641 + +0.1 3,642,641 + -0.0 3,642,641 + -0.5 3,642,641 + -1.2 3,642,642 - -0.1 3,642,642 - -0.6 3,642,642 - +0.3 3,642,642 - -0.1 3,642,645 + +0.2 3,642,645 + +0.8 3,642,645 + -0.9 3,642,645 + -0.9 3,642,646 - +2.4 3,642,646 - -0.8 3,642,648 - -0.1 3,642,648 - -1.1 3,642,687 - +0.6 3,642,727 + -0.3 3,642,860 + -0.0 3,642,861 - -1.6 3,642,870 + -0.6 3,642,871 - +0.6 3,642,913 + -0.3 3,642,914 - -0.3 3,642,914 - -0.3 3,642,973 - -0.9
Or see this region's nucleotide sequence