Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2883 and Echvi_2884 overlap by 10 nucleotides Echvi_2884 and Echvi_2885 are separated by 2 nucleotides
Echvi_2883: Echvi_2883 - ATPase, P-type (transporting), HAD superfamily, subfamily IC, at 3,453,098 to 3,455,527
_2883
Echvi_2884: Echvi_2884 - cytochrome oxidase maturation protein, cbb3-type, at 3,455,518 to 3,455,697
_2884
Echvi_2885: Echvi_2885 - cytochrome c oxidase, cbb3-type, subunit I/cytochrome c oxidase, cbb3-type, subunit II, at 3,455,700 to 3,457,853
_2885
Position (kb)
3455
3456 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3454.717 kb on - strand, within Echvi_2883 at 3454.726 kb on + strand, within Echvi_2883 at 3454.726 kb on + strand, within Echvi_2883 at 3454.727 kb on - strand, within Echvi_2883 at 3454.727 kb on - strand, within Echvi_2883 at 3454.750 kb on - strand, within Echvi_2883 at 3454.770 kb on - strand, within Echvi_2883 at 3454.829 kb on + strand, within Echvi_2883 at 3454.830 kb on - strand, within Echvi_2883 at 3454.830 kb on - strand, within Echvi_2883 at 3454.830 kb on - strand, within Echvi_2883 at 3454.830 kb on - strand, within Echvi_2883 at 3454.845 kb on + strand, within Echvi_2883 at 3454.846 kb on - strand, within Echvi_2883 at 3455.124 kb on - strand, within Echvi_2883 at 3455.128 kb on + strand, within Echvi_2883 at 3455.129 kb on - strand, within Echvi_2883 at 3455.237 kb on - strand, within Echvi_2883 at 3455.324 kb on - strand at 3455.366 kb on - strand at 3455.366 kb on - strand at 3455.371 kb on - strand at 3455.371 kb on - strand at 3455.392 kb on - strand at 3455.444 kb on - strand at 3455.525 kb on + strand at 3455.526 kb on - strand at 3455.528 kb on + strand at 3455.574 kb on - strand, within Echvi_2884 at 3455.616 kb on + strand, within Echvi_2884 at 3455.617 kb on - strand, within Echvi_2884 at 3455.617 kb on - strand, within Echvi_2884 at 3455.620 kb on + strand, within Echvi_2884 at 3455.620 kb on + strand, within Echvi_2884 at 3455.620 kb on + strand, within Echvi_2884 at 3455.621 kb on - strand, within Echvi_2884 at 3455.621 kb on - strand, within Echvi_2884 at 3455.621 kb on - strand, within Echvi_2884 at 3455.640 kb on - strand, within Echvi_2884 at 3455.652 kb on + strand, within Echvi_2884 at 3455.653 kb on - strand, within Echvi_2884 at 3455.695 kb on + strand at 3455.695 kb on + strand at 3455.695 kb on + strand at 3455.696 kb on - strand at 3455.696 kb on - strand at 3455.696 kb on - strand at 3455.696 kb on - strand at 3455.696 kb on - strand at 3455.696 kb on - strand at 3455.730 kb on + strand at 3455.735 kb on + strand at 3455.739 kb on - strand at 3455.739 kb on - strand at 3455.739 kb on - strand at 3455.739 kb on - strand at 3455.751 kb on + strand at 3455.821 kb on + strand at 3455.854 kb on - strand at 3455.858 kb on + strand at 3455.859 kb on - strand at 3455.937 kb on + strand, within Echvi_2885 at 3455.937 kb on + strand, within Echvi_2885 at 3455.940 kb on + strand, within Echvi_2885 at 3456.072 kb on + strand, within Echvi_2885 at 3456.137 kb on + strand, within Echvi_2885 at 3456.137 kb on + strand, within Echvi_2885 at 3456.147 kb on - strand, within Echvi_2885 at 3456.177 kb on + strand, within Echvi_2885 at 3456.177 kb on + strand, within Echvi_2885 at 3456.177 kb on + strand, within Echvi_2885 at 3456.177 kb on + strand, within Echvi_2885 at 3456.177 kb on + strand, within Echvi_2885 at 3456.178 kb on - strand, within Echvi_2885 at 3456.178 kb on - strand, within Echvi_2885 at 3456.178 kb on - strand, within Echvi_2885 at 3456.185 kb on + strand, within Echvi_2885 at 3456.186 kb on - strand, within Echvi_2885 at 3456.195 kb on + strand, within Echvi_2885 at 3456.196 kb on - strand, within Echvi_2885 at 3456.237 kb on - strand, within Echvi_2885 at 3456.273 kb on + strand, within Echvi_2885 at 3456.274 kb on - strand, within Echvi_2885 at 3456.274 kb on - strand, within Echvi_2885 at 3456.282 kb on + strand, within Echvi_2885 at 3456.283 kb on - strand, within Echvi_2885 at 3456.283 kb on - strand, within Echvi_2885 at 3456.358 kb on - strand, within Echvi_2885 at 3456.373 kb on - strand, within Echvi_2885 at 3456.375 kb on + strand, within Echvi_2885 at 3456.404 kb on + strand, within Echvi_2885 at 3456.408 kb on + strand, within Echvi_2885 at 3456.409 kb on - strand, within Echvi_2885 at 3456.409 kb on - strand, within Echvi_2885 at 3456.414 kb on + strand, within Echvi_2885 at 3456.416 kb on + strand, within Echvi_2885 at 3456.452 kb on + strand, within Echvi_2885 at 3456.453 kb on - strand, within Echvi_2885 at 3456.456 kb on + strand, within Echvi_2885 at 3456.541 kb on + strand, within Echvi_2885 at 3456.542 kb on - strand, within Echvi_2885 at 3456.542 kb on - strand, within Echvi_2885 at 3456.614 kb on - strand, within Echvi_2885 at 3456.638 kb on - strand, within Echvi_2885 at 3456.638 kb on - strand, within Echvi_2885
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,454,717 - Echvi_2883 0.67 +0.0 3,454,726 + Echvi_2883 0.67 -0.3 3,454,726 + Echvi_2883 0.67 -0.6 3,454,727 - Echvi_2883 0.67 -0.1 3,454,727 - Echvi_2883 0.67 +0.5 3,454,750 - Echvi_2883 0.68 +0.1 3,454,770 - Echvi_2883 0.69 +0.3 3,454,829 + Echvi_2883 0.71 -0.5 3,454,830 - Echvi_2883 0.71 -0.8 3,454,830 - Echvi_2883 0.71 +0.5 3,454,830 - Echvi_2883 0.71 +0.5 3,454,830 - Echvi_2883 0.71 -1.1 3,454,845 + Echvi_2883 0.72 -1.2 3,454,846 - Echvi_2883 0.72 -0.3 3,455,124 - Echvi_2883 0.83 -0.0 3,455,128 + Echvi_2883 0.84 -0.2 3,455,129 - Echvi_2883 0.84 +0.5 3,455,237 - Echvi_2883 0.88 -2.1 3,455,324 - +0.4 3,455,366 - +0.8 3,455,366 - +0.8 3,455,371 - -0.5 3,455,371 - +0.2 3,455,392 - -0.8 3,455,444 - -0.3 3,455,525 + -0.2 3,455,526 - -0.7 3,455,528 + +0.8 3,455,574 - Echvi_2884 0.31 -1.1 3,455,616 + Echvi_2884 0.54 -1.3 3,455,617 - Echvi_2884 0.55 +0.8 3,455,617 - Echvi_2884 0.55 -0.2 3,455,620 + Echvi_2884 0.57 -0.7 3,455,620 + Echvi_2884 0.57 -0.4 3,455,620 + Echvi_2884 0.57 -0.2 3,455,621 - Echvi_2884 0.57 +0.8 3,455,621 - Echvi_2884 0.57 -1.0 3,455,621 - Echvi_2884 0.57 -0.2 3,455,640 - Echvi_2884 0.68 -2.8 3,455,652 + Echvi_2884 0.74 -1.1 3,455,653 - Echvi_2884 0.75 -0.6 3,455,695 + -1.3 3,455,695 + -0.3 3,455,695 + +0.3 3,455,696 - +0.4 3,455,696 - +0.1 3,455,696 - -0.4 3,455,696 - -0.5 3,455,696 - -1.1 3,455,696 - -0.4 3,455,730 + -0.1 3,455,735 + +1.1 3,455,739 - +0.3 3,455,739 - +0.8 3,455,739 - -0.3 3,455,739 - -0.4 3,455,751 + -0.9 3,455,821 + +0.1 3,455,854 - +0.7 3,455,858 + -0.6 3,455,859 - -1.8 3,455,937 + Echvi_2885 0.11 -2.4 3,455,937 + Echvi_2885 0.11 -0.5 3,455,940 + Echvi_2885 0.11 +1.3 3,456,072 + Echvi_2885 0.17 +0.3 3,456,137 + Echvi_2885 0.20 -0.2 3,456,137 + Echvi_2885 0.20 -0.1 3,456,147 - Echvi_2885 0.21 -1.0 3,456,177 + Echvi_2885 0.22 -0.2 3,456,177 + Echvi_2885 0.22 -0.6 3,456,177 + Echvi_2885 0.22 -0.3 3,456,177 + Echvi_2885 0.22 +0.0 3,456,177 + Echvi_2885 0.22 -0.1 3,456,178 - Echvi_2885 0.22 +1.5 3,456,178 - Echvi_2885 0.22 +0.3 3,456,178 - Echvi_2885 0.22 -0.4 3,456,185 + Echvi_2885 0.23 -0.4 3,456,186 - Echvi_2885 0.23 -0.2 3,456,195 + Echvi_2885 0.23 +0.3 3,456,196 - Echvi_2885 0.23 +0.4 3,456,237 - Echvi_2885 0.25 +0.3 3,456,273 + Echvi_2885 0.27 -0.5 3,456,274 - Echvi_2885 0.27 -0.7 3,456,274 - Echvi_2885 0.27 -0.9 3,456,282 + Echvi_2885 0.27 -0.9 3,456,283 - Echvi_2885 0.27 -1.5 3,456,283 - Echvi_2885 0.27 +0.8 3,456,358 - Echvi_2885 0.31 +0.2 3,456,373 - Echvi_2885 0.31 +0.1 3,456,375 + Echvi_2885 0.31 -0.8 3,456,404 + Echvi_2885 0.33 +0.1 3,456,408 + Echvi_2885 0.33 +2.4 3,456,409 - Echvi_2885 0.33 -0.6 3,456,409 - Echvi_2885 0.33 -1.1 3,456,414 + Echvi_2885 0.33 -0.4 3,456,416 + Echvi_2885 0.33 -0.9 3,456,452 + Echvi_2885 0.35 +0.2 3,456,453 - Echvi_2885 0.35 -0.0 3,456,456 + Echvi_2885 0.35 +0.0 3,456,541 + Echvi_2885 0.39 -0.4 3,456,542 - Echvi_2885 0.39 +0.1 3,456,542 - Echvi_2885 0.39 +0.1 3,456,614 - Echvi_2885 0.42 +0.2 3,456,638 - Echvi_2885 0.44 +1.8 3,456,638 - Echvi_2885 0.44 +0.3
Or see this region's nucleotide sequence