Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2602 and Echvi_2603 are separated by 84 nucleotides Echvi_2603 and Echvi_2604 are separated by 170 nucleotides Echvi_2604 and Echvi_2605 overlap by 4 nucleotides
Echvi_2602: Echvi_2602 - Glycosyltransferase, at 3,083,989 to 3,085,122
_2602
Echvi_2603: Echvi_2603 - Uncharacterized protein conserved in bacteria, at 3,085,207 to 3,085,575
_2603
Echvi_2604: Echvi_2604 - Glycosyltransferase, at 3,085,746 to 3,086,879
_2604
Echvi_2605: Echvi_2605 - Glycosyltransferase, at 3,086,876 to 3,088,006
_2605
Position (kb)
3085
3086
3087 Strain fitness (log2 ratio)
-2
-1
0
1 at 3084.788 kb on + strand, within Echvi_2602 at 3084.788 kb on + strand, within Echvi_2602 at 3084.789 kb on - strand, within Echvi_2602 at 3084.789 kb on - strand, within Echvi_2602 at 3084.789 kb on - strand, within Echvi_2602 at 3084.790 kb on + strand, within Echvi_2602 at 3084.790 kb on + strand, within Echvi_2602 at 3084.790 kb on + strand, within Echvi_2602 at 3084.791 kb on - strand, within Echvi_2602 at 3084.796 kb on + strand, within Echvi_2602 at 3084.824 kb on - strand, within Echvi_2602 at 3084.849 kb on - strand, within Echvi_2602 at 3084.855 kb on + strand, within Echvi_2602 at 3084.856 kb on - strand, within Echvi_2602 at 3084.874 kb on - strand, within Echvi_2602 at 3084.876 kb on + strand, within Echvi_2602 at 3084.876 kb on + strand, within Echvi_2602 at 3084.877 kb on - strand, within Echvi_2602 at 3084.878 kb on + strand, within Echvi_2602 at 3084.879 kb on - strand, within Echvi_2602 at 3084.879 kb on - strand, within Echvi_2602 at 3084.879 kb on - strand, within Echvi_2602 at 3084.879 kb on - strand, within Echvi_2602 at 3084.879 kb on - strand, within Echvi_2602 at 3084.888 kb on + strand, within Echvi_2602 at 3084.980 kb on - strand, within Echvi_2602 at 3085.039 kb on - strand at 3085.141 kb on - strand at 3085.141 kb on - strand at 3085.141 kb on - strand at 3085.185 kb on + strand at 3085.194 kb on + strand at 3085.204 kb on + strand at 3085.205 kb on - strand at 3085.205 kb on - strand at 3085.215 kb on + strand at 3085.215 kb on + strand at 3085.216 kb on - strand at 3085.255 kb on - strand, within Echvi_2603 at 3085.338 kb on - strand, within Echvi_2603 at 3085.353 kb on + strand, within Echvi_2603 at 3085.353 kb on + strand, within Echvi_2603 at 3085.353 kb on + strand, within Echvi_2603 at 3085.354 kb on - strand, within Echvi_2603 at 3085.354 kb on - strand, within Echvi_2603 at 3085.354 kb on - strand, within Echvi_2603 at 3085.356 kb on - strand, within Echvi_2603 at 3085.356 kb on - strand, within Echvi_2603 at 3085.366 kb on - strand, within Echvi_2603 at 3085.378 kb on + strand, within Echvi_2603 at 3085.397 kb on + strand, within Echvi_2603 at 3085.398 kb on - strand, within Echvi_2603 at 3085.493 kb on + strand, within Echvi_2603 at 3085.497 kb on + strand, within Echvi_2603 at 3085.497 kb on + strand, within Echvi_2603 at 3085.558 kb on - strand at 3085.558 kb on - strand at 3085.558 kb on - strand at 3085.558 kb on - strand at 3085.563 kb on + strand at 3085.563 kb on + strand at 3085.563 kb on + strand at 3085.564 kb on - strand at 3085.564 kb on - strand at 3085.564 kb on - strand at 3085.599 kb on + strand at 3085.625 kb on - strand at 3085.625 kb on - strand at 3085.635 kb on - strand at 3085.639 kb on + strand at 3085.654 kb on - strand at 3085.679 kb on + strand at 3085.741 kb on - strand at 3085.754 kb on - strand at 3085.767 kb on - strand at 3085.811 kb on - strand at 3085.811 kb on - strand at 3085.854 kb on + strand at 3085.854 kb on + strand at 3085.855 kb on - strand at 3085.993 kb on + strand, within Echvi_2604 at 3086.001 kb on + strand, within Echvi_2604 at 3086.002 kb on - strand, within Echvi_2604 at 3086.014 kb on + strand, within Echvi_2604 at 3086.015 kb on - strand, within Echvi_2604 at 3086.015 kb on - strand, within Echvi_2604 at 3086.229 kb on + strand, within Echvi_2604 at 3086.229 kb on + strand, within Echvi_2604 at 3086.247 kb on - strand, within Echvi_2604 at 3086.255 kb on - strand, within Echvi_2604 at 3086.437 kb on + strand, within Echvi_2604 at 3086.438 kb on - strand, within Echvi_2604 at 3086.544 kb on + strand, within Echvi_2604 at 3086.566 kb on + strand, within Echvi_2604 at 3086.566 kb on + strand, within Echvi_2604 at 3086.566 kb on + strand, within Echvi_2604 at 3086.567 kb on - strand, within Echvi_2604 at 3086.567 kb on - strand, within Echvi_2604 at 3086.602 kb on + strand, within Echvi_2604 at 3086.602 kb on + strand, within Echvi_2604 at 3086.603 kb on - strand, within Echvi_2604 at 3086.603 kb on - strand, within Echvi_2604 at 3086.619 kb on + strand, within Echvi_2604 at 3086.639 kb on - strand, within Echvi_2604 at 3086.691 kb on + strand, within Echvi_2604 at 3086.692 kb on - strand, within Echvi_2604 at 3086.768 kb on + strand at 3086.769 kb on - strand at 3086.981 kb on + strand at 3086.982 kb on - strand at 3087.025 kb on - strand, within Echvi_2605 at 3087.037 kb on + strand, within Echvi_2605 at 3087.062 kb on + strand, within Echvi_2605 at 3087.133 kb on + strand, within Echvi_2605 at 3087.133 kb on + strand, within Echvi_2605 at 3087.133 kb on + strand, within Echvi_2605 at 3087.133 kb on + strand, within Echvi_2605 at 3087.133 kb on + strand, within Echvi_2605 at 3087.134 kb on - strand, within Echvi_2605 at 3087.134 kb on - strand, within Echvi_2605 at 3087.139 kb on + strand, within Echvi_2605 at 3087.140 kb on - strand, within Echvi_2605 at 3087.142 kb on + strand, within Echvi_2605 at 3087.215 kb on + strand, within Echvi_2605 at 3087.215 kb on + strand, within Echvi_2605 at 3087.242 kb on + strand, within Echvi_2605 at 3087.242 kb on + strand, within Echvi_2605 at 3087.333 kb on + strand, within Echvi_2605 at 3087.367 kb on + strand, within Echvi_2605 at 3087.395 kb on - strand, within Echvi_2605 at 3087.698 kb on + strand, within Echvi_2605 at 3087.698 kb on + strand, within Echvi_2605 at 3087.792 kb on + strand, within Echvi_2605 at 3087.792 kb on + strand, within Echvi_2605
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 3,084,788 + Echvi_2602 0.70 -0.7 3,084,788 + Echvi_2602 0.70 -0.4 3,084,789 - Echvi_2602 0.71 -1.3 3,084,789 - Echvi_2602 0.71 +0.1 3,084,789 - Echvi_2602 0.71 -0.5 3,084,790 + Echvi_2602 0.71 +0.2 3,084,790 + Echvi_2602 0.71 +0.2 3,084,790 + Echvi_2602 0.71 -0.1 3,084,791 - Echvi_2602 0.71 +0.1 3,084,796 + Echvi_2602 0.71 -0.5 3,084,824 - Echvi_2602 0.74 +0.2 3,084,849 - Echvi_2602 0.76 +1.4 3,084,855 + Echvi_2602 0.76 +0.1 3,084,856 - Echvi_2602 0.76 -1.2 3,084,874 - Echvi_2602 0.78 -0.6 3,084,876 + Echvi_2602 0.78 -0.6 3,084,876 + Echvi_2602 0.78 +0.4 3,084,877 - Echvi_2602 0.78 +0.1 3,084,878 + Echvi_2602 0.78 -1.0 3,084,879 - Echvi_2602 0.78 -1.4 3,084,879 - Echvi_2602 0.78 +0.4 3,084,879 - Echvi_2602 0.78 -0.6 3,084,879 - Echvi_2602 0.78 -2.5 3,084,879 - Echvi_2602 0.78 +0.3 3,084,888 + Echvi_2602 0.79 -0.4 3,084,980 - Echvi_2602 0.87 -0.1 3,085,039 - +0.1 3,085,141 - +1.4 3,085,141 - -1.0 3,085,141 - -1.3 3,085,185 + -0.7 3,085,194 + -1.0 3,085,204 + -0.5 3,085,205 - -0.8 3,085,205 - -0.8 3,085,215 + +0.4 3,085,215 + +0.3 3,085,216 - +0.4 3,085,255 - Echvi_2603 0.13 +0.4 3,085,338 - Echvi_2603 0.36 -0.8 3,085,353 + Echvi_2603 0.40 +0.8 3,085,353 + Echvi_2603 0.40 -0.3 3,085,353 + Echvi_2603 0.40 +1.6 3,085,354 - Echvi_2603 0.40 +0.0 3,085,354 - Echvi_2603 0.40 -0.0 3,085,354 - Echvi_2603 0.40 -0.3 3,085,356 - Echvi_2603 0.40 +0.0 3,085,356 - Echvi_2603 0.40 -1.6 3,085,366 - Echvi_2603 0.43 -1.1 3,085,378 + Echvi_2603 0.46 -0.7 3,085,397 + Echvi_2603 0.51 +1.0 3,085,398 - Echvi_2603 0.52 +0.0 3,085,493 + Echvi_2603 0.78 +0.7 3,085,497 + Echvi_2603 0.79 -0.2 3,085,497 + Echvi_2603 0.79 +1.2 3,085,558 - -0.1 3,085,558 - +0.5 3,085,558 - -0.2 3,085,558 - -0.8 3,085,563 + -0.4 3,085,563 + +1.2 3,085,563 + -1.0 3,085,564 - +0.4 3,085,564 - -0.3 3,085,564 - -0.1 3,085,599 + +1.1 3,085,625 - +0.7 3,085,625 - -0.6 3,085,635 - -0.1 3,085,639 + +0.6 3,085,654 - -0.4 3,085,679 + -0.6 3,085,741 - -1.6 3,085,754 - -0.7 3,085,767 - +0.5 3,085,811 - -1.5 3,085,811 - -0.1 3,085,854 + -0.1 3,085,854 + +0.1 3,085,855 - +1.1 3,085,993 + Echvi_2604 0.22 -0.4 3,086,001 + Echvi_2604 0.22 -0.8 3,086,002 - Echvi_2604 0.23 -0.9 3,086,014 + Echvi_2604 0.24 -0.6 3,086,015 - Echvi_2604 0.24 -0.6 3,086,015 - Echvi_2604 0.24 +0.3 3,086,229 + Echvi_2604 0.43 -1.6 3,086,229 + Echvi_2604 0.43 -0.0 3,086,247 - Echvi_2604 0.44 +0.8 3,086,255 - Echvi_2604 0.45 -1.3 3,086,437 + Echvi_2604 0.61 -0.1 3,086,438 - Echvi_2604 0.61 +0.6 3,086,544 + Echvi_2604 0.70 -1.7 3,086,566 + Echvi_2604 0.72 -1.6 3,086,566 + Echvi_2604 0.72 -0.2 3,086,566 + Echvi_2604 0.72 -1.3 3,086,567 - Echvi_2604 0.72 -0.8 3,086,567 - Echvi_2604 0.72 -0.1 3,086,602 + Echvi_2604 0.75 -0.6 3,086,602 + Echvi_2604 0.75 +1.6 3,086,603 - Echvi_2604 0.76 -0.1 3,086,603 - Echvi_2604 0.76 -1.3 3,086,619 + Echvi_2604 0.77 -1.9 3,086,639 - Echvi_2604 0.79 -0.4 3,086,691 + Echvi_2604 0.83 -0.3 3,086,692 - Echvi_2604 0.83 -0.2 3,086,768 + +1.4 3,086,769 - +0.8 3,086,981 + -0.5 3,086,982 - -1.4 3,087,025 - Echvi_2605 0.13 +0.7 3,087,037 + Echvi_2605 0.14 -0.3 3,087,062 + Echvi_2605 0.16 +1.4 3,087,133 + Echvi_2605 0.23 +1.1 3,087,133 + Echvi_2605 0.23 -1.2 3,087,133 + Echvi_2605 0.23 -1.3 3,087,133 + Echvi_2605 0.23 -0.4 3,087,133 + Echvi_2605 0.23 +0.4 3,087,134 - Echvi_2605 0.23 +0.4 3,087,134 - Echvi_2605 0.23 -0.0 3,087,139 + Echvi_2605 0.23 -0.1 3,087,140 - Echvi_2605 0.23 +0.0 3,087,142 + Echvi_2605 0.24 +0.1 3,087,215 + Echvi_2605 0.30 +1.0 3,087,215 + Echvi_2605 0.30 -1.4 3,087,242 + Echvi_2605 0.32 -0.1 3,087,242 + Echvi_2605 0.32 -0.4 3,087,333 + Echvi_2605 0.40 +1.7 3,087,367 + Echvi_2605 0.43 +0.6 3,087,395 - Echvi_2605 0.46 -0.2 3,087,698 + Echvi_2605 0.73 -0.4 3,087,698 + Echvi_2605 0.73 +0.8 3,087,792 + Echvi_2605 0.81 -0.2 3,087,792 + Echvi_2605 0.81 +0.0
Or see this region's nucleotide sequence