Experiment: m.b. perchlorate 50 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2174 and Echvi_2175 are separated by 195 nucleotides Echvi_2175 and Echvi_2176 are separated by 127 nucleotides Echvi_2176 and Echvi_2177 are separated by 83 nucleotides
Echvi_2174: Echvi_2174 - hypothetical protein, at 2,597,722 to 2,598,198
_2174
Echvi_2175: Echvi_2175 - hypothetical protein, at 2,598,394 to 2,598,486
_2175
Echvi_2176: Echvi_2176 - RNA polymerase sigma factor, sigma-70 family, at 2,598,614 to 2,599,261
_2176
Echvi_2177: Echvi_2177 - Fe2+-dicitrate sensor, membrane component, at 2,599,345 to 2,600,397
_2177
Position (kb)
2598
2599
2600 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.643 kb on + strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.644 kb on - strand at 2597.724 kb on - strand at 2597.739 kb on + strand at 2597.785 kb on - strand at 2597.786 kb on + strand, within Echvi_2174 at 2597.786 kb on + strand, within Echvi_2174 at 2597.787 kb on - strand, within Echvi_2174 at 2597.787 kb on - strand, within Echvi_2174 at 2597.879 kb on - strand, within Echvi_2174 at 2597.940 kb on - strand, within Echvi_2174 at 2597.940 kb on - strand, within Echvi_2174 at 2597.940 kb on - strand, within Echvi_2174 at 2597.951 kb on + strand, within Echvi_2174 at 2597.980 kb on - strand, within Echvi_2174 at 2598.160 kb on + strand at 2598.163 kb on + strand at 2598.164 kb on - strand at 2598.164 kb on - strand at 2598.225 kb on - strand at 2598.245 kb on + strand at 2598.260 kb on + strand at 2598.306 kb on + strand at 2598.309 kb on - strand at 2598.309 kb on - strand at 2598.349 kb on - strand at 2598.374 kb on + strand at 2598.584 kb on - strand at 2598.638 kb on + strand at 2598.712 kb on + strand, within Echvi_2176 at 2598.751 kb on + strand, within Echvi_2176 at 2598.752 kb on - strand, within Echvi_2176 at 2598.752 kb on - strand, within Echvi_2176 at 2598.754 kb on - strand, within Echvi_2176 at 2598.757 kb on + strand, within Echvi_2176 at 2598.757 kb on + strand, within Echvi_2176 at 2598.757 kb on + strand, within Echvi_2176 at 2598.758 kb on - strand, within Echvi_2176 at 2598.758 kb on - strand, within Echvi_2176 at 2598.758 kb on - strand, within Echvi_2176 at 2598.759 kb on + strand, within Echvi_2176 at 2598.759 kb on + strand, within Echvi_2176 at 2598.759 kb on + strand, within Echvi_2176 at 2598.759 kb on + strand, within Echvi_2176 at 2598.759 kb on + strand, within Echvi_2176 at 2598.759 kb on + strand, within Echvi_2176 at 2598.759 kb on + strand, within Echvi_2176 at 2598.760 kb on - strand, within Echvi_2176 at 2598.760 kb on - strand, within Echvi_2176 at 2598.760 kb on - strand, within Echvi_2176 at 2598.760 kb on - strand, within Echvi_2176 at 2598.760 kb on - strand, within Echvi_2176 at 2598.760 kb on - strand, within Echvi_2176 at 2598.761 kb on + strand, within Echvi_2176 at 2598.761 kb on + strand, within Echvi_2176 at 2598.761 kb on + strand, within Echvi_2176 at 2598.761 kb on + strand, within Echvi_2176 at 2598.761 kb on + strand, within Echvi_2176 at 2598.761 kb on + strand, within Echvi_2176 at 2598.762 kb on - strand, within Echvi_2176 at 2598.762 kb on - strand, within Echvi_2176 at 2598.762 kb on - strand, within Echvi_2176 at 2598.763 kb on + strand, within Echvi_2176 at 2598.847 kb on + strand, within Echvi_2176 at 2598.847 kb on + strand, within Echvi_2176 at 2598.886 kb on + strand, within Echvi_2176 at 2598.886 kb on + strand, within Echvi_2176 at 2598.886 kb on + strand, within Echvi_2176 at 2598.887 kb on - strand, within Echvi_2176 at 2598.887 kb on - strand, within Echvi_2176 at 2598.960 kb on - strand, within Echvi_2176 at 2598.994 kb on + strand, within Echvi_2176 at 2599.000 kb on - strand, within Echvi_2176 at 2599.115 kb on + strand, within Echvi_2176 at 2599.115 kb on + strand, within Echvi_2176 at 2599.163 kb on + strand, within Echvi_2176 at 2599.186 kb on + strand, within Echvi_2176 at 2599.187 kb on - strand, within Echvi_2176 at 2599.190 kb on - strand, within Echvi_2176 at 2599.397 kb on + strand at 2599.484 kb on - strand, within Echvi_2177 at 2599.514 kb on - strand, within Echvi_2177 at 2599.525 kb on + strand, within Echvi_2177 at 2599.626 kb on - strand, within Echvi_2177 at 2599.680 kb on - strand, within Echvi_2177 at 2599.732 kb on - strand, within Echvi_2177 at 2599.732 kb on - strand, within Echvi_2177 at 2599.819 kb on - strand, within Echvi_2177 at 2599.831 kb on - strand, within Echvi_2177 at 2599.950 kb on - strand, within Echvi_2177 at 2599.953 kb on - strand, within Echvi_2177 at 2599.978 kb on - strand, within Echvi_2177 at 2600.069 kb on + strand, within Echvi_2177 at 2600.069 kb on + strand, within Echvi_2177 at 2600.070 kb on - strand, within Echvi_2177 at 2600.077 kb on + strand, within Echvi_2177 at 2600.078 kb on - strand, within Echvi_2177 at 2600.081 kb on + strand, within Echvi_2177 at 2600.105 kb on + strand, within Echvi_2177 at 2600.106 kb on - strand, within Echvi_2177 at 2600.200 kb on - strand, within Echvi_2177 at 2600.200 kb on - strand, within Echvi_2177 at 2600.201 kb on + strand, within Echvi_2177 at 2600.201 kb on + strand, within Echvi_2177 at 2600.201 kb on + strand, within Echvi_2177 at 2600.201 kb on + strand, within Echvi_2177 at 2600.202 kb on - strand, within Echvi_2177 at 2600.202 kb on - strand, within Echvi_2177 at 2600.247 kb on - strand, within Echvi_2177
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 50 mM remove 2,597,643 + -1.6 2,597,643 + +0.7 2,597,643 + -0.1 2,597,643 + -0.9 2,597,643 + -0.2 2,597,643 + -0.6 2,597,643 + -0.3 2,597,643 + -0.4 2,597,643 + -0.6 2,597,643 + -0.3 2,597,643 + -1.0 2,597,643 + +1.2 2,597,643 + -0.2 2,597,644 - -0.4 2,597,644 - -0.3 2,597,644 - -0.1 2,597,644 - +0.5 2,597,644 - -0.6 2,597,644 - -1.5 2,597,644 - -0.5 2,597,644 - +0.4 2,597,644 - -0.4 2,597,644 - +0.2 2,597,644 - +0.2 2,597,644 - -1.2 2,597,644 - +0.1 2,597,644 - +1.8 2,597,724 - -1.4 2,597,739 + -2.3 2,597,785 - +0.3 2,597,786 + Echvi_2174 0.13 +1.0 2,597,786 + Echvi_2174 0.13 +0.3 2,597,787 - Echvi_2174 0.14 +0.7 2,597,787 - Echvi_2174 0.14 +0.0 2,597,879 - Echvi_2174 0.33 -0.1 2,597,940 - Echvi_2174 0.46 +1.5 2,597,940 - Echvi_2174 0.46 -0.3 2,597,940 - Echvi_2174 0.46 +1.5 2,597,951 + Echvi_2174 0.48 -0.5 2,597,980 - Echvi_2174 0.54 +0.0 2,598,160 + -0.7 2,598,163 + -0.1 2,598,164 - -0.1 2,598,164 - +0.8 2,598,225 - +0.5 2,598,245 + -0.1 2,598,260 + +1.4 2,598,306 + +1.4 2,598,309 - -0.0 2,598,309 - +0.5 2,598,349 - +0.5 2,598,374 + +0.1 2,598,584 - -0.6 2,598,638 + +1.4 2,598,712 + Echvi_2176 0.15 -0.3 2,598,751 + Echvi_2176 0.21 -0.6 2,598,752 - Echvi_2176 0.21 -0.0 2,598,752 - Echvi_2176 0.21 +1.3 2,598,754 - Echvi_2176 0.22 +0.4 2,598,757 + Echvi_2176 0.22 +0.9 2,598,757 + Echvi_2176 0.22 +0.3 2,598,757 + Echvi_2176 0.22 +0.4 2,598,758 - Echvi_2176 0.22 -0.0 2,598,758 - Echvi_2176 0.22 -1.0 2,598,758 - Echvi_2176 0.22 -0.4 2,598,759 + Echvi_2176 0.22 +0.7 2,598,759 + Echvi_2176 0.22 +0.3 2,598,759 + Echvi_2176 0.22 +1.0 2,598,759 + Echvi_2176 0.22 +0.9 2,598,759 + Echvi_2176 0.22 -0.7 2,598,759 + Echvi_2176 0.22 +1.1 2,598,759 + Echvi_2176 0.22 +0.6 2,598,760 - Echvi_2176 0.23 -0.3 2,598,760 - Echvi_2176 0.23 +0.1 2,598,760 - Echvi_2176 0.23 -0.7 2,598,760 - Echvi_2176 0.23 +0.3 2,598,760 - Echvi_2176 0.23 +0.1 2,598,760 - Echvi_2176 0.23 +0.4 2,598,761 + Echvi_2176 0.23 +0.7 2,598,761 + Echvi_2176 0.23 -0.2 2,598,761 + Echvi_2176 0.23 -1.1 2,598,761 + Echvi_2176 0.23 +1.5 2,598,761 + Echvi_2176 0.23 +1.0 2,598,761 + Echvi_2176 0.23 +0.4 2,598,762 - Echvi_2176 0.23 -0.3 2,598,762 - Echvi_2176 0.23 +0.2 2,598,762 - Echvi_2176 0.23 -0.0 2,598,763 + Echvi_2176 0.23 -0.0 2,598,847 + Echvi_2176 0.36 +0.0 2,598,847 + Echvi_2176 0.36 +0.6 2,598,886 + Echvi_2176 0.42 +0.9 2,598,886 + Echvi_2176 0.42 +0.6 2,598,886 + Echvi_2176 0.42 -0.4 2,598,887 - Echvi_2176 0.42 -0.4 2,598,887 - Echvi_2176 0.42 -1.5 2,598,960 - Echvi_2176 0.53 +0.9 2,598,994 + Echvi_2176 0.59 +0.2 2,599,000 - Echvi_2176 0.60 +0.6 2,599,115 + Echvi_2176 0.77 -0.2 2,599,115 + Echvi_2176 0.77 -0.9 2,599,163 + Echvi_2176 0.85 +0.1 2,599,186 + Echvi_2176 0.88 +0.9 2,599,187 - Echvi_2176 0.88 -0.1 2,599,190 - Echvi_2176 0.89 -0.3 2,599,397 + -0.6 2,599,484 - Echvi_2177 0.13 +0.3 2,599,514 - Echvi_2177 0.16 +0.4 2,599,525 + Echvi_2177 0.17 +1.3 2,599,626 - Echvi_2177 0.27 +0.6 2,599,680 - Echvi_2177 0.32 -0.0 2,599,732 - Echvi_2177 0.37 -0.4 2,599,732 - Echvi_2177 0.37 -1.4 2,599,819 - Echvi_2177 0.45 -0.3 2,599,831 - Echvi_2177 0.46 +0.3 2,599,950 - Echvi_2177 0.57 +0.8 2,599,953 - Echvi_2177 0.58 +0.4 2,599,978 - Echvi_2177 0.60 +1.1 2,600,069 + Echvi_2177 0.69 -0.9 2,600,069 + Echvi_2177 0.69 +0.7 2,600,070 - Echvi_2177 0.69 +1.1 2,600,077 + Echvi_2177 0.70 +1.1 2,600,078 - Echvi_2177 0.70 -1.2 2,600,081 + Echvi_2177 0.70 +2.2 2,600,105 + Echvi_2177 0.72 +0.4 2,600,106 - Echvi_2177 0.72 -0.9 2,600,200 - Echvi_2177 0.81 +1.4 2,600,200 - Echvi_2177 0.81 +0.0 2,600,201 + Echvi_2177 0.81 -1.0 2,600,201 + Echvi_2177 0.81 -0.5 2,600,201 + Echvi_2177 0.81 +2.1 2,600,201 + Echvi_2177 0.81 -0.6 2,600,202 - Echvi_2177 0.81 -0.2 2,600,202 - Echvi_2177 0.81 -0.3 2,600,247 - Echvi_2177 0.86 -0.8
Or see this region's nucleotide sequence