Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4207 and EX28DRAFT_4208 overlap by 4 nucleotides EX28DRAFT_4208 and EX28DRAFT_4209 are separated by 9 nucleotides EX28DRAFT_4209 and EX28DRAFT_4210 overlap by 4 nucleotides
EX28DRAFT_4207: EX28DRAFT_4207 - Uncharacterized enzyme of phosphonate metabolism, at 14,713 to 15,558
_4207
EX28DRAFT_4208: EX28DRAFT_4208 - phosphonate C-P lyase system protein PhnK, at 15,555 to 16,310
_4208
EX28DRAFT_4209: EX28DRAFT_4209 - phosphonate C-P lyase system protein PhnL, at 16,320 to 17,000
_4209
EX28DRAFT_4210: EX28DRAFT_4210 - phosphonate metabolism protein PhnM, at 16,997 to 18,133
_4210
Position (kb)
16
17
18 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 15.353 kb on - strand, within EX28DRAFT_4207 at 15.367 kb on + strand, within EX28DRAFT_4207 at 15.460 kb on + strand, within EX28DRAFT_4207 at 15.460 kb on + strand, within EX28DRAFT_4207 at 15.578 kb on + strand at 15.578 kb on + strand at 15.742 kb on - strand, within EX28DRAFT_4208 at 16.055 kb on + strand, within EX28DRAFT_4208 at 16.309 kb on - strand at 16.309 kb on - strand at 16.331 kb on - strand at 16.331 kb on - strand at 16.339 kb on + strand at 16.340 kb on - strand at 16.340 kb on - strand at 16.343 kb on + strand at 16.344 kb on - strand at 16.344 kb on - strand at 16.394 kb on + strand, within EX28DRAFT_4209 at 16.395 kb on - strand, within EX28DRAFT_4209 at 16.491 kb on + strand, within EX28DRAFT_4209 at 16.492 kb on - strand, within EX28DRAFT_4209 at 16.492 kb on - strand, within EX28DRAFT_4209 at 16.565 kb on + strand, within EX28DRAFT_4209 at 16.565 kb on + strand, within EX28DRAFT_4209 at 16.565 kb on + strand, within EX28DRAFT_4209 at 16.565 kb on + strand, within EX28DRAFT_4209 at 16.566 kb on - strand, within EX28DRAFT_4209 at 16.831 kb on + strand, within EX28DRAFT_4209 at 16.951 kb on + strand at 17.101 kb on + strand at 17.529 kb on - strand, within EX28DRAFT_4210 at 17.529 kb on - strand, within EX28DRAFT_4210 at 17.538 kb on - strand, within EX28DRAFT_4210 at 17.552 kb on + strand, within EX28DRAFT_4210 at 17.627 kb on - strand, within EX28DRAFT_4210 at 17.706 kb on + strand, within EX28DRAFT_4210 at 17.962 kb on + strand, within EX28DRAFT_4210 at 17.962 kb on + strand, within EX28DRAFT_4210
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 15,353 - EX28DRAFT_4207 0.76 +0.4 15,367 + EX28DRAFT_4207 0.77 -1.7 15,460 + EX28DRAFT_4207 0.88 +1.2 15,460 + EX28DRAFT_4207 0.88 -2.5 15,578 + -0.0 15,578 + -2.5 15,742 - EX28DRAFT_4208 0.25 +0.4 16,055 + EX28DRAFT_4208 0.66 +0.5 16,309 - -0.6 16,309 - -0.2 16,331 - -0.8 16,331 - +0.1 16,339 + -0.1 16,340 - +0.3 16,340 - +1.3 16,343 + +0.4 16,344 - +0.1 16,344 - +0.6 16,394 + EX28DRAFT_4209 0.11 +0.2 16,395 - EX28DRAFT_4209 0.11 +0.8 16,491 + EX28DRAFT_4209 0.25 +0.3 16,492 - EX28DRAFT_4209 0.25 -0.2 16,492 - EX28DRAFT_4209 0.25 +0.7 16,565 + EX28DRAFT_4209 0.36 -0.2 16,565 + EX28DRAFT_4209 0.36 +0.1 16,565 + EX28DRAFT_4209 0.36 +0.4 16,565 + EX28DRAFT_4209 0.36 +0.4 16,566 - EX28DRAFT_4209 0.36 +0.6 16,831 + EX28DRAFT_4209 0.75 -0.8 16,951 + +2.0 17,101 + +1.2 17,529 - EX28DRAFT_4210 0.47 +0.1 17,529 - EX28DRAFT_4210 0.47 +0.6 17,538 - EX28DRAFT_4210 0.48 -0.4 17,552 + EX28DRAFT_4210 0.49 +0.8 17,627 - EX28DRAFT_4210 0.55 +0.2 17,706 + EX28DRAFT_4210 0.62 -0.9 17,962 + EX28DRAFT_4210 0.85 +0.4 17,962 + EX28DRAFT_4210 0.85 -0.6
Or see this region's nucleotide sequence