Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4195 and EX28DRAFT_4196 are separated by 51 nucleotides EX28DRAFT_4196 and EX28DRAFT_4197 overlap by 4 nucleotides
EX28DRAFT_4195: EX28DRAFT_4195 - 2-keto-3-deoxygluconate transporter, at 3,361 to 4,353
_4195
EX28DRAFT_4196: EX28DRAFT_4196 - YjcZ-like protein, at 4,405 to 5,280
_4196
EX28DRAFT_4197: EX28DRAFT_4197 - Dynamin family, at 5,277 to 7,631
_4197
Position (kb) 4
5
6 Strain fitness (log2 ratio) -2
-1
0
1 at 3.491 kb on + strand, within EX28DRAFT_4195 at 3.570 kb on - strand, within EX28DRAFT_4195 at 3.718 kb on - strand, within EX28DRAFT_4195 at 3.736 kb on + strand, within EX28DRAFT_4195 at 3.737 kb on - strand, within EX28DRAFT_4195 at 4.244 kb on + strand, within EX28DRAFT_4195 at 4.245 kb on - strand, within EX28DRAFT_4195 at 4.286 kb on - strand at 4.306 kb on - strand at 4.468 kb on - strand at 4.563 kb on + strand, within EX28DRAFT_4196 at 4.564 kb on - strand, within EX28DRAFT_4196 at 4.655 kb on + strand, within EX28DRAFT_4196 at 4.655 kb on + strand, within EX28DRAFT_4196 at 4.764 kb on + strand, within EX28DRAFT_4196 at 4.902 kb on + strand, within EX28DRAFT_4196 at 5.233 kb on - strand at 5.235 kb on + strand at 5.236 kb on - strand at 5.361 kb on - strand at 5.536 kb on - strand, within EX28DRAFT_4197 at 5.558 kb on + strand, within EX28DRAFT_4197 at 5.559 kb on - strand, within EX28DRAFT_4197 at 5.568 kb on - strand, within EX28DRAFT_4197 at 5.568 kb on - strand, within EX28DRAFT_4197 at 5.580 kb on + strand, within EX28DRAFT_4197 at 5.580 kb on + strand, within EX28DRAFT_4197 at 5.580 kb on + strand, within EX28DRAFT_4197 at 5.581 kb on - strand, within EX28DRAFT_4197 at 5.597 kb on + strand, within EX28DRAFT_4197 at 5.603 kb on - strand, within EX28DRAFT_4197 at 5.623 kb on + strand, within EX28DRAFT_4197 at 5.623 kb on + strand, within EX28DRAFT_4197 at 5.623 kb on + strand, within EX28DRAFT_4197 at 5.736 kb on - strand, within EX28DRAFT_4197 at 5.759 kb on + strand, within EX28DRAFT_4197 at 5.880 kb on - strand, within EX28DRAFT_4197 at 5.880 kb on - strand, within EX28DRAFT_4197
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 3,491 + EX28DRAFT_4195 0.13 -0.8 3,570 - EX28DRAFT_4195 0.21 -1.3 3,718 - EX28DRAFT_4195 0.36 +0.5 3,736 + EX28DRAFT_4195 0.38 -0.7 3,737 - EX28DRAFT_4195 0.38 +1.1 4,244 + EX28DRAFT_4195 0.89 +1.3 4,245 - EX28DRAFT_4195 0.89 -1.9 4,286 - +0.0 4,306 - +0.1 4,468 - -0.7 4,563 + EX28DRAFT_4196 0.18 -0.1 4,564 - EX28DRAFT_4196 0.18 -1.0 4,655 + EX28DRAFT_4196 0.29 -0.6 4,655 + EX28DRAFT_4196 0.29 -0.6 4,764 + EX28DRAFT_4196 0.41 -1.3 4,902 + EX28DRAFT_4196 0.57 -0.7 5,233 - +0.8 5,235 + +0.6 5,236 - -1.3 5,361 - -1.5 5,536 - EX28DRAFT_4197 0.11 +0.3 5,558 + EX28DRAFT_4197 0.12 +0.6 5,559 - EX28DRAFT_4197 0.12 +1.5 5,568 - EX28DRAFT_4197 0.12 +0.4 5,568 - EX28DRAFT_4197 0.12 +0.4 5,580 + EX28DRAFT_4197 0.13 -0.8 5,580 + EX28DRAFT_4197 0.13 -0.1 5,580 + EX28DRAFT_4197 0.13 -1.3 5,581 - EX28DRAFT_4197 0.13 +0.5 5,597 + EX28DRAFT_4197 0.14 +0.7 5,603 - EX28DRAFT_4197 0.14 +1.4 5,623 + EX28DRAFT_4197 0.15 +0.4 5,623 + EX28DRAFT_4197 0.15 -0.9 5,623 + EX28DRAFT_4197 0.15 +0.2 5,736 - EX28DRAFT_4197 0.19 -0.6 5,759 + EX28DRAFT_4197 0.20 -0.4 5,880 - EX28DRAFT_4197 0.26 +0.5 5,880 - EX28DRAFT_4197 0.26 +0.7
Or see this region's nucleotide sequence