Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4183 and EX28DRAFT_4184 are separated by 166 nucleotides EX28DRAFT_4184 and EX28DRAFT_4185 overlap by 1 nucleotides EX28DRAFT_4185 and EX28DRAFT_4186 overlap by 1 nucleotides EX28DRAFT_4186 and EX28DRAFT_4187 are separated by 7 nucleotides
EX28DRAFT_4183: EX28DRAFT_4183 - FKBP-type peptidyl-prolyl cis-trans isomerases 1, at 165,766 to 166,572
_4183
EX28DRAFT_4184: EX28DRAFT_4184 - Uncharacterized protein conserved in bacteria, at 166,739 to 167,461
_4184
EX28DRAFT_4185: EX28DRAFT_4185 - sulfur relay protein TusD/DsrE, at 167,461 to 167,847
_4185
EX28DRAFT_4186: EX28DRAFT_4186 - sulfur relay protein TusC/DsrF, at 167,847 to 168,206
_4186
EX28DRAFT_4187: EX28DRAFT_4187 - sulfur relay protein TusB/DsrH, at 168,214 to 168,501
_4187
Position (kb) 166
167
168 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 165.762 kb on - strand at 165.785 kb on + strand at 166.035 kb on + strand, within EX28DRAFT_4183 at 166.217 kb on - strand, within EX28DRAFT_4183 at 166.288 kb on - strand, within EX28DRAFT_4183 at 166.288 kb on - strand, within EX28DRAFT_4183 at 166.571 kb on - strand at 166.613 kb on - strand at 166.626 kb on + strand at 166.626 kb on + strand at 166.627 kb on - strand at 166.628 kb on + strand at 166.628 kb on + strand at 166.629 kb on - strand at 166.632 kb on + strand at 166.633 kb on - strand at 166.662 kb on + strand at 166.667 kb on + strand at 166.667 kb on + strand at 166.679 kb on + strand at 166.679 kb on + strand at 166.683 kb on + strand at 166.683 kb on + strand at 167.330 kb on + strand, within EX28DRAFT_4184 at 167.408 kb on + strand at 167.414 kb on + strand at 167.416 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 165,762 - +0.1 165,785 + -1.2 166,035 + EX28DRAFT_4183 0.33 +0.3 166,217 - EX28DRAFT_4183 0.56 +0.6 166,288 - EX28DRAFT_4183 0.65 -1.3 166,288 - EX28DRAFT_4183 0.65 +0.1 166,571 - -2.1 166,613 - +0.2 166,626 + -2.3 166,626 + +0.9 166,627 - +0.4 166,628 + -1.6 166,628 + -0.6 166,629 - -2.7 166,632 + +0.4 166,633 - +0.2 166,662 + +0.1 166,667 + +0.6 166,667 + -0.0 166,679 + +1.8 166,679 + -4.0 166,683 + -2.8 166,683 + +0.6 167,330 + EX28DRAFT_4184 0.82 -3.9 167,408 + +0.6 167,414 + -3.4 167,416 + -0.5
Or see this region's nucleotide sequence